Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL392103.1-201ENST00000447000 198 ntBASIC1.13□□□□□ -2.23
PCDH9Q9HC56 RNU7-73P-201ENST00000458743 63 ntBASIC1.13□□□□□ -2.23
PCDH9Q9HC56 RNU7-200P-201ENST00000516105 62 ntBASIC1.13□□□□□ -2.23
PCDH9Q9HC56 RNU7-40P-201ENST00000516397 64 ntBASIC1.13□□□□□ -2.23
PCDH9Q9HC56 MIR548X2-201ENST00000579776 100 ntBASIC1.13□□□□□ -2.23
PCDH9Q9HC56 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.13□□□□□ -2.23
PCDH9Q9HC56 RNU6-774P-201ENST00000363238 107 ntBASIC1.12□□□□□ -2.23
PCDH9Q9HC56 RNU4-16P-201ENST00000364737 141 ntBASIC1.12□□□□□ -2.23
PCDH9Q9HC56 RNU6-53P-201ENST00000365367 106 ntBASIC1.12□□□□□ -2.23
PCDH9Q9HC56 Y_RNA.488-201ENST00000384403 102 ntBASIC1.12□□□□□ -2.23
PCDH9Q9HC56 SNORA75.2-201ENST00000391138 150 ntBASIC1.12□□□□□ -2.23
PCDH9Q9HC56 SNORA75.3-201ENST00000391231 150 ntBASIC1.12□□□□□ -2.23
PCDH9Q9HC56 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.12□□□□□ -2.23
PCDH9Q9HC56 Y_RNA.686-201ENST00000516548 134 ntBASIC1.12□□□□□ -2.23
PCDH9Q9HC56 AL022345.2-201ENST00000606307 135 ntBASIC1.12□□□□□ -2.23
PCDH9Q9HC56 Y_RNA.251-201ENST00000364551 99 ntBASIC1.11□□□□□ -2.23
PCDH9Q9HC56 SNORA1.1-201ENST00000364671 133 ntBASIC1.11□□□□□ -2.23
PCDH9Q9HC56 RNU6-392P-201ENST00000364926 101 ntBASIC1.11□□□□□ -2.23
PCDH9Q9HC56 RNU6-396P-201ENST00000365369 105 ntBASIC1.11□□□□□ -2.23
PCDH9Q9HC56 RNA5SP95-201ENST00000410319 137 ntBASIC1.11□□□□□ -2.23
PCDH9Q9HC56 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.11□□□□□ -2.23
PCDH9Q9HC56 RNU6-1212P-201ENST00000517023 104 ntBASIC1.11□□□□□ -2.23
PCDH9Q9HC56 AL020996.3-201ENST00000606617 222 ntBASIC1.11□□□□□ -2.23
PCDH9Q9HC56 MIR8055-201ENST00000610739 97 ntBASIC1.11□□□□□ -2.23
PCDH9Q9HC56 AC091895.1-201ENST00000624494 256 ntBASIC1.11□□□□□ -2.23
PCDH9Q9HC56 RNU6-654P-201ENST00000364373 107 ntBASIC1.1□□□□□ -2.23
PCDH9Q9HC56 RNU6-309P-201ENST00000364573 106 ntBASIC1.1□□□□□ -2.23
PCDH9Q9HC56 RNU6-1062P-201ENST00000383908 107 ntBASIC1.1□□□□□ -2.23
PCDH9Q9HC56 SNORA25-201ENST00000384384 134 ntBASIC1.1□□□□□ -2.23
PCDH9Q9HC56 SNORA80D-201ENST00000384488 135 ntBASIC1.1□□□□□ -2.23
PCDH9Q9HC56 Y_RNA.506-201ENST00000384494 102 ntBASIC1.1□□□□□ -2.23
PCDH9Q9HC56 MRPL35P3-201ENST00000421557 364 ntBASIC1.1□□□□□ -2.23
PCDH9Q9HC56 MTATP6P21-201ENST00000440681 189 ntBASIC1.1□□□□□ -2.23
PCDH9Q9HC56 RNU7-197P-201ENST00000458836 62 ntBASIC1.1□□□□□ -2.23
PCDH9Q9HC56 Y_RNA.690-201ENST00000516603 95 ntBASIC1.1□□□□□ -2.23
PCDH9Q9HC56 RNU2-60P-201ENST00000517290 128 ntBASIC1.1□□□□□ -2.23
PCDH9Q9HC56 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
PCDH9Q9HC56 MIR4295-201ENST00000585286 85 ntBASIC1.1□□□□□ -2.23
PCDH9Q9HC56 MIR6516-201ENST00000630554 81 ntBASIC1.1□□□□□ -2.23
PCDH9Q9HC56 AC008163.1-202ENST00000636004 2889 ntBASIC1.1□□□□□ -2.23
PCDH9Q9HC56 RNU6-915P-201ENST00000364943 103 ntBASIC1.09□□□□□ -2.23
PCDH9Q9HC56 Y_RNA.420-201ENST00000384043 110 ntBASIC1.09□□□□□ -2.23
PCDH9Q9HC56 RNU6-125P-201ENST00000384505 107 ntBASIC1.09□□□□□ -2.23
PCDH9Q9HC56 SNORD38B-201ENST00000384690 67 ntBASIC1.09□□□□□ -2.23
PCDH9Q9HC56 MIR569-201ENST00000385228 96 ntBASIC1.09□□□□□ -2.23
PCDH9Q9HC56 SNORD79.1-201ENST00000516069 84 ntBASIC1.09□□□□□ -2.23
PCDH9Q9HC56 RNA5SP236-201ENST00000516169 116 ntBASIC1.09□□□□□ -2.23
PCDH9Q9HC56 RNU6-426P-201ENST00000516464 97 ntBASIC1.09□□□□□ -2.23
PCDH9Q9HC56 AC023827.1-201ENST00000569247 97 ntBASIC1.09□□□□□ -2.23
PCDH9Q9HC56 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.09□□□□□ -2.23
PCDH9Q9HC56 SEPT14P17-201ENST00000617978 177 ntBASIC1.09□□□□□ -2.23
PCDH9Q9HC56 MIR6717-201ENST00000622747 73 ntBASIC1.09□□□□□ -2.23
PCDH9Q9HC56 SNORD38B-202ENST00000625943 69 ntBASIC1.09□□□□□ -2.23
PCDH9Q9HC56 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
PCDH9Q9HC56 Y_RNA.120-201ENST00000363304 110 ntBASIC1.08□□□□□ -2.24
PCDH9Q9HC56 RNU6-205P-201ENST00000390858 107 ntBASIC1.08□□□□□ -2.24
PCDH9Q9HC56 AC087343.1-201ENST00000477341 475 ntBASIC1.08□□□□□ -2.24
PCDH9Q9HC56 MIR2115-201ENST00000516657 100 ntBASIC1.08□□□□□ -2.24
PCDH9Q9HC56 MIR3152-201ENST00000579801 74 ntBASIC1.08□□□□□ -2.24
PCDH9Q9HC56 MIR3133-201ENST00000583157 78 ntBASIC1.08□□□□□ -2.24
PCDH9Q9HC56 AC021613.1-201ENST00000623880 111 ntBASIC1.08□□□□□ -2.24
PCDH9Q9HC56 AC027335.2-201ENST00000624030 375 ntBASIC1.08□□□□□ -2.24
PCDH9Q9HC56 Y_RNA.226-201ENST00000364337 114 ntBASIC1.07□□□□□ -2.24
PCDH9Q9HC56 RNU6-690P-201ENST00000365242 106 ntBASIC1.07□□□□□ -2.24
PCDH9Q9HC56 Y_RNA.343-201ENST00000365354 112 ntBASIC1.07□□□□□ -2.24
PCDH9Q9HC56 RNY1P6-201ENST00000384193 109 ntBASIC1.07□□□□□ -2.24
PCDH9Q9HC56 SNORA2B-201ENST00000384583 137 ntBASIC1.07□□□□□ -2.24
PCDH9Q9HC56 SNORA26.6-201ENST00000391256 115 ntBASIC1.07□□□□□ -2.24
PCDH9Q9HC56 MIR1287-201ENST00000408492 90 ntBASIC1.07□□□□□ -2.24
PCDH9Q9HC56 RNA5SP261-201ENST00000410536 106 ntBASIC1.07□□□□□ -2.24
PCDH9Q9HC56 RNU6-602P-201ENST00000411155 105 ntBASIC1.07□□□□□ -2.24
PCDH9Q9HC56 RPS3AP1-201ENST00000413190 320 ntBASIC1.07□□□□□ -2.24
PCDH9Q9HC56 RNU7-21P-201ENST00000459430 62 ntBASIC1.07□□□□□ -2.24
PCDH9Q9HC56 RNU11-2P-201ENST00000516898 142 ntBASIC1.07□□□□□ -2.24
PCDH9Q9HC56 AP001328.1-201ENST00000528550 176 ntBASIC1.07□□□□□ -2.24
PCDH9Q9HC56 AP000753.3-201ENST00000604083 169 ntBASIC1.07□□□□□ -2.24
PCDH9Q9HC56 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
PCDH9Q9HC56 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
PCDH9Q9HC56 Z97988.1-201ENST00000637697 135 ntBASIC1.07□□□□□ -2.24
PCDH9Q9HC56 SNORA25.9-201ENST00000365087 128 ntBASIC1.06□□□□□ -2.24
PCDH9Q9HC56 RNU6-1319P-201ENST00000390855 104 ntBASIC1.06□□□□□ -2.24
PCDH9Q9HC56 RNU6-747P-201ENST00000390928 104 ntBASIC1.06□□□□□ -2.24
PCDH9Q9HC56 RNU6-241P-201ENST00000391148 104 ntBASIC1.06□□□□□ -2.24
PCDH9Q9HC56 AL603914.1-201ENST00000401964 204 ntBASIC1.06□□□□□ -2.24
PCDH9Q9HC56 RNU6-177P-201ENST00000411257 104 ntBASIC1.06□□□□□ -2.24
PCDH9Q9HC56 AC244023.1-201ENST00000426884 112 ntBASIC1.06□□□□□ -2.24
PCDH9Q9HC56 RNU6-240P-201ENST00000516098 97 ntBASIC1.06□□□□□ -2.24
PCDH9Q9HC56 AC242498.1-201ENST00000604134 111 ntBASIC1.06□□□□□ -2.24
PCDH9Q9HC56 MIR8070-201ENST00000616510 88 ntBASIC1.06□□□□□ -2.24
PCDH9Q9HC56 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
PCDH9Q9HC56 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
PCDH9Q9HC56 RNU6-349P-201ENST00000362402 107 ntBASIC1.05□□□□□ -2.24
PCDH9Q9HC56 SNORD12C-201ENST00000386307 89 ntBASIC1.05□□□□□ -2.24
PCDH9Q9HC56 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
PCDH9Q9HC56 AC002429.1-201ENST00000437672 148 ntBASIC1.05□□□□□ -2.24
PCDH9Q9HC56 RNU7-90P-201ENST00000459216 62 ntBASIC1.05□□□□□ -2.24
PCDH9Q9HC56 Y_RNA.651-201ENST00000459380 103 ntBASIC1.05□□□□□ -2.24
PCDH9Q9HC56 Y_RNA.692-201ENST00000516627 105 ntBASIC1.05□□□□□ -2.24
PCDH9Q9HC56 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
PCDH9Q9HC56 Y_RNA.294-201ENST00000364916 102 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms