Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 MIR3683-201ENST00000580847 82 ntBASIC1.56□□□□□ -2.16
PIF1Q9H611 MIR6845-201ENST00000613182 61 ntBASIC1.56□□□□□ -2.16
PIF1Q9H611 AC084768.2-201ENST00000622736 221 ntBASIC1.56□□□□□ -2.16
PIF1Q9H611 AC008163.1-202ENST00000636004 2889 ntBASIC1.55□□□□□ -2.16
PIF1Q9H611 SNORA26.6-201ENST00000391256 115 ntBASIC1.55□□□□□ -2.16
PIF1Q9H611 AC002429.1-201ENST00000437672 148 ntBASIC1.55□□□□□ -2.16
PIF1Q9H611 AC106800.4-201ENST00000614905 153 ntBASIC1.55□□□□□ -2.16
PIF1Q9H611 U2.22-201ENST00000636441 106 ntBASIC1.55□□□□□ -2.16
PIF1Q9H611 Y_RNA.114-201ENST00000363265 113 ntBASIC1.54□□□□□ -2.16
PIF1Q9H611 RNU6-690P-201ENST00000365242 106 ntBASIC1.54□□□□□ -2.16
PIF1Q9H611 RNU6-602P-201ENST00000411155 105 ntBASIC1.54□□□□□ -2.16
PIF1Q9H611 AL022718.1-201ENST00000412004 84 ntBASIC1.54□□□□□ -2.16
PIF1Q9H611 FABP5P4-201ENST00000437203 171 ntBASIC1.54□□□□□ -2.16
PIF1Q9H611 AC067940.1-201ENST00000458411 300 ntBASIC1.54□□□□□ -2.16
PIF1Q9H611 RNU6-1234P-201ENST00000516877 103 ntBASIC1.54□□□□□ -2.16
PIF1Q9H611 MIR502-201ENST00000606349 86 ntBASIC1.54□□□□□ -2.16
PIF1Q9H611 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.54□□□□□ -2.16
PIF1Q9H611 RNU6-349P-201ENST00000362402 107 ntBASIC1.53□□□□□ -2.16
PIF1Q9H611 RNU6-235P-201ENST00000362644 107 ntBASIC1.53□□□□□ -2.16
PIF1Q9H611 Y_RNA.218-201ENST00000364218 104 ntBASIC1.53□□□□□ -2.16
PIF1Q9H611 RNU6-580P-201ENST00000365159 107 ntBASIC1.53□□□□□ -2.16
PIF1Q9H611 MIR504-201ENST00000385065 83 ntBASIC1.53□□□□□ -2.16
PIF1Q9H611 RNA5SP404-201ENST00000517118 132 ntBASIC1.53□□□□□ -2.16
PIF1Q9H611 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
PIF1Q9H611 SNORA22.1-201ENST00000362701 134 ntBASIC1.52□□□□□ -2.17
PIF1Q9H611 MIR1289-2-201ENST00000408360 111 ntBASIC1.52□□□□□ -2.17
PIF1Q9H611 RPS23P4-201ENST00000487908 423 ntBASIC1.52□□□□□ -2.17
PIF1Q9H611 MIR4298-201ENST00000584380 73 ntBASIC1.52□□□□□ -2.17
PIF1Q9H611 MIR6841-201ENST00000637129 72 ntBASIC1.52□□□□□ -2.17
PIF1Q9H611 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
PIF1Q9H611 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
PIF1Q9H611 Y_RNA.71-201ENST00000362892 104 ntBASIC1.51□□□□□ -2.17
PIF1Q9H611 RNU4-16P-201ENST00000364737 141 ntBASIC1.51□□□□□ -2.17
PIF1Q9H611 RNU6-1117P-201ENST00000384525 104 ntBASIC1.51□□□□□ -2.17
PIF1Q9H611 SNORA2B-201ENST00000384583 137 ntBASIC1.51□□□□□ -2.17
PIF1Q9H611 MIR150-201ENST00000385048 84 ntBASIC1.51□□□□□ -2.17
PIF1Q9H611 HMGN1P33-201ENST00000432945 451 ntBASIC1.51□□□□□ -2.17
PIF1Q9H611 AL158147.1-201ENST00000443970 75 ntBASIC1.51□□□□□ -2.17
PIF1Q9H611 AC023790.1-201ENST00000482174 347 ntBASIC1.51□□□□□ -2.17
PIF1Q9H611 RNU6-240P-201ENST00000516098 97 ntBASIC1.51□□□□□ -2.17
PIF1Q9H611 AC133485.4-201ENST00000561835 220 ntBASIC1.51□□□□□ -2.17
PIF1Q9H611 AC138907.4-201ENST00000570107 226 ntBASIC1.51□□□□□ -2.17
PIF1Q9H611 HSPE1P19-201ENST00000603327 295 ntBASIC1.51□□□□□ -2.17
PIF1Q9H611 AC108081.1-201ENST00000604358 221 ntBASIC1.51□□□□□ -2.17
PIF1Q9H611 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
PIF1Q9H611 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
PIF1Q9H611 RNU6-647P-201ENST00000364243 107 ntBASIC1.5□□□□□ -2.17
PIF1Q9H611 SNORD114-24-201ENST00000365029 72 ntBASIC1.5□□□□□ -2.17
PIF1Q9H611 SNORD113-1-201ENST00000365321 69 ntBASIC1.5□□□□□ -2.17
PIF1Q9H611 RNU6-80P-201ENST00000384195 107 ntBASIC1.5□□□□□ -2.17
PIF1Q9H611 RNU7-45P-201ENST00000459460 63 ntBASIC1.5□□□□□ -2.17
PIF1Q9H611 AC036111.3-201ENST00000526389 112 ntBASIC1.5□□□□□ -2.17
PIF1Q9H611 AL136317.1-201ENST00000612653 226 ntBASIC1.5□□□□□ -2.17
PIF1Q9H611 AC012676.2-201ENST00000619258 186 ntBASIC1.5□□□□□ -2.17
PIF1Q9H611 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.49□□□□□ -2.17
PIF1Q9H611 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.49□□□□□ -2.17
PIF1Q9H611 RNU7-62P-201ENST00000458856 62 ntBASIC1.49□□□□□ -2.17
PIF1Q9H611 SNORA25.15-201ENST00000516487 89 ntBASIC1.49□□□□□ -2.17
PIF1Q9H611 RNU6-62P-201ENST00000516526 102 ntBASIC1.49□□□□□ -2.17
PIF1Q9H611 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.49□□□□□ -2.17
PIF1Q9H611 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.48□□□□□ -2.17
PIF1Q9H611 Y_RNA.280-201ENST00000364765 112 ntBASIC1.48□□□□□ -2.17
PIF1Q9H611 Y_RNA.366-201ENST00000365540 102 ntBASIC1.48□□□□□ -2.17
PIF1Q9H611 RNU6-22P-201ENST00000384355 107 ntBASIC1.48□□□□□ -2.17
PIF1Q9H611 SNORA67.5-201ENST00000391036 107 ntBASIC1.48□□□□□ -2.17
PIF1Q9H611 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
PIF1Q9H611 RNU6-994P-201ENST00000410507 111 ntBASIC1.48□□□□□ -2.17
PIF1Q9H611 RNU6-1190P-201ENST00000410811 104 ntBASIC1.48□□□□□ -2.17
PIF1Q9H611 MIR18B-201ENST00000454574 71 ntBASIC1.48□□□□□ -2.17
PIF1Q9H611 RNU7-107P-201ENST00000459121 61 ntBASIC1.48□□□□□ -2.17
PIF1Q9H611 snoU13.2-201ENST00000459201 104 ntBASIC1.48□□□□□ -2.17
PIF1Q9H611 RNU6-1061P-201ENST00000516530 99 ntBASIC1.48□□□□□ -2.17
PIF1Q9H611 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.48□□□□□ -2.17
PIF1Q9H611 AL365222.1-201ENST00000614661 98 ntBASIC1.48□□□□□ -2.17
PIF1Q9H611 AL137067.1-201ENST00000615933 120 ntBASIC1.48□□□□□ -2.17
PIF1Q9H611 RNU6-654P-201ENST00000364373 107 ntBASIC1.47□□□□□ -2.17
PIF1Q9H611 SNORD116-14-201ENST00000383894 92 ntBASIC1.47□□□□□ -2.17
PIF1Q9H611 SNORD116-17-201ENST00000383929 92 ntBASIC1.47□□□□□ -2.17
PIF1Q9H611 SNORD116-15-201ENST00000384445 92 ntBASIC1.47□□□□□ -2.17
PIF1Q9H611 SNORD116-19-201ENST00000384729 92 ntBASIC1.47□□□□□ -2.17
PIF1Q9H611 MIR1304-201ENST00000408243 91 ntBASIC1.47□□□□□ -2.17
PIF1Q9H611 RNA5SP144-201ENST00000410846 116 ntBASIC1.47□□□□□ -2.17
PIF1Q9H611 AC090844.1-201ENST00000422019 156 ntBASIC1.47□□□□□ -2.17
PIF1Q9H611 AC244023.1-201ENST00000426884 112 ntBASIC1.47□□□□□ -2.17
PIF1Q9H611 AC008267.6-201ENST00000441664 139 ntBASIC1.47□□□□□ -2.17
PIF1Q9H611 RN7SKP19-201ENST00000516016 252 ntBASIC1.47□□□□□ -2.17
PIF1Q9H611 RNU6-1333P-201ENST00000516162 93 ntBASIC1.47□□□□□ -2.17
PIF1Q9H611 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.47□□□□□ -2.17
PIF1Q9H611 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.47□□□□□ -2.17
PIF1Q9H611 MIR4305-201ENST00000583252 102 ntBASIC1.47□□□□□ -2.17
PIF1Q9H611 AC242498.1-201ENST00000604134 111 ntBASIC1.47□□□□□ -2.17
PIF1Q9H611 Y_RNA.127-201ENST00000363386 109 ntBASIC1.46□□□□□ -2.18
PIF1Q9H611 Y_RNA.261-201ENST00000364631 102 ntBASIC1.46□□□□□ -2.18
PIF1Q9H611 Y_RNA.525-201ENST00000384570 113 ntBASIC1.46□□□□□ -2.18
PIF1Q9H611 MIR320A-201ENST00000385302 82 ntBASIC1.46□□□□□ -2.18
PIF1Q9H611 MT-TF-201ENST00000387314 71 ntBASIC1.46□□□□□ -2.18
PIF1Q9H611 RNA5SP237-201ENST00000410414 113 ntBASIC1.46□□□□□ -2.18
PIF1Q9H611 snoU13.23-201ENST00000458863 104 ntBASIC1.46□□□□□ -2.18
PIF1Q9H611 RNU6-548P-201ENST00000517083 115 ntBASIC1.46□□□□□ -2.18
PIF1Q9H611 IGKV1-22-201ENST00000524313 326 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 206.4 ms