Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.53□□□□□ -2.49
VCX3BQ9H321 RNA5SP133-201ENST00000363368 119 ntBASIC-0.53□□□□□ -2.49
VCX3BQ9H321 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.53□□□□□ -2.49
VCX3BQ9H321 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.53□□□□□ -2.49
VCX3BQ9H321 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.53□□□□□ -2.49
VCX3BQ9H321 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.53□□□□□ -2.49
VCX3BQ9H321 SNORD41.1-201ENST00000391000 69 ntBASIC-0.53□□□□□ -2.49
VCX3BQ9H321 AC096531.1-201ENST00000419107 107 ntBASIC-0.53□□□□□ -2.49
VCX3BQ9H321 HSPE1P25-201ENST00000455484 251 ntBASIC-0.53□□□□□ -2.49
VCX3BQ9H321 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.53□□□□□ -2.49
VCX3BQ9H321 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.53□□□□□ -2.49
VCX3BQ9H321 AC113139.1-201ENST00000605049 239 ntBASIC-0.53□□□□□ -2.49
VCX3BQ9H321 AC007485.1-201ENST00000616755 206 ntBASIC-0.53□□□□□ -2.49
VCX3BQ9H321 AC104985.2-201ENST00000620598 500 ntBASIC-0.53□□□□□ -2.49
VCX3BQ9H321 AL162726.3-218ENST00000636401 95 ntBASIC-0.53□□□□□ -2.49
VCX3BQ9H321 RNA5SP403-201ENST00000363598 108 ntBASIC-0.54□□□□□ -2.5
VCX3BQ9H321 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.54□□□□□ -2.5
VCX3BQ9H321 RNU6-811P-201ENST00000384069 107 ntBASIC-0.54□□□□□ -2.5
VCX3BQ9H321 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.54□□□□□ -2.5
VCX3BQ9H321 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.54□□□□□ -2.5
VCX3BQ9H321 SNORD116-29-201ENST00000384516 83 ntBASIC-0.54□□□□□ -2.5
VCX3BQ9H321 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.54□□□□□ -2.5
VCX3BQ9H321 PMCHL1-202ENST00000423102 261 ntBASIC-0.54□□□□□ -2.5
VCX3BQ9H321 AL589823.1-201ENST00000429577 183 ntBASIC-0.54□□□□□ -2.5
VCX3BQ9H321 MIR4263-201ENST00000584745 83 ntBASIC-0.54□□□□□ -2.5
VCX3BQ9H321 AC080013.6-201ENST00000606185 215 ntBASIC-0.54□□□□□ -2.5
VCX3BQ9H321 SNORD58B-201ENST00000607313 66 ntBASIC-0.54□□□□□ -2.5
VCX3BQ9H321 AC021613.1-201ENST00000623880 111 ntBASIC-0.54□□□□□ -2.5
VCX3BQ9H321 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.54□□□□□ -2.5
VCX3BQ9H321 U6.109-201ENST00000636749 87 ntBASIC-0.54□□□□□ -2.5
VCX3BQ9H321 MIR101-2-201ENST00000362195 79 ntBASIC-0.55□□□□□ -2.5
VCX3BQ9H321 SNORD113-8-201ENST00000363497 74 ntBASIC-0.55□□□□□ -2.5
VCX3BQ9H321 SNORD114-11-201ENST00000363738 75 ntBASIC-0.55□□□□□ -2.5
VCX3BQ9H321 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.55□□□□□ -2.5
VCX3BQ9H321 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.55□□□□□ -2.5
VCX3BQ9H321 SNORD81.2-201ENST00000365153 76 ntBASIC-0.55□□□□□ -2.5
VCX3BQ9H321 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.55□□□□□ -2.5
VCX3BQ9H321 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.55□□□□□ -2.5
VCX3BQ9H321 MIR626-201ENST00000385032 94 ntBASIC-0.55□□□□□ -2.5
VCX3BQ9H321 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
VCX3BQ9H321 RNY4P36-201ENST00000391116 96 ntBASIC-0.55□□□□□ -2.5
VCX3BQ9H321 AC006210.1-201ENST00000424882 111 ntBASIC-0.55□□□□□ -2.5
VCX3BQ9H321 Z83846.1-201ENST00000446798 265 ntBASIC-0.55□□□□□ -2.5
VCX3BQ9H321 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.55□□□□□ -2.5
VCX3BQ9H321 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.55□□□□□ -2.5
VCX3BQ9H321 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.55□□□□□ -2.5
VCX3BQ9H321 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.55□□□□□ -2.5
VCX3BQ9H321 AC025253.1-201ENST00000613623 543 ntBASIC-0.55□□□□□ -2.5
VCX3BQ9H321 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.55□□□□□ -2.5
VCX3BQ9H321 AL606534.2-204ENST00000635008 178 ntBASIC-0.55□□□□□ -2.5
VCX3BQ9H321 MTND4LP32-201ENST00000636111 270 ntBASIC-0.55□□□□□ -2.5
VCX3BQ9H321 MTND5P32-201ENST00000560711 1802 ntBASIC-0.55□□□□□ -2.5
VCX3BQ9H321 MIR655-201ENST00000362159 97 ntBASIC-0.56□□□□□ -2.5
VCX3BQ9H321 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.56□□□□□ -2.5
VCX3BQ9H321 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.56□□□□□ -2.5
VCX3BQ9H321 RNU6-623P-201ENST00000363143 105 ntBASIC-0.56□□□□□ -2.5
VCX3BQ9H321 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.56□□□□□ -2.5
VCX3BQ9H321 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.56□□□□□ -2.5
VCX3BQ9H321 MIR196A2-201ENST00000385189 110 ntBASIC-0.56□□□□□ -2.5
VCX3BQ9H321 RNU2-55P-201ENST00000411146 174 ntBASIC-0.56□□□□□ -2.5
VCX3BQ9H321 AC016907.1-201ENST00000419483 435 ntBASIC-0.56□□□□□ -2.5
VCX3BQ9H321 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.56□□□□□ -2.5
VCX3BQ9H321 RNA5SP153-201ENST00000516498 76 ntBASIC-0.56□□□□□ -2.5
VCX3BQ9H321 RNA5SP330-201ENST00000517096 96 ntBASIC-0.56□□□□□ -2.5
VCX3BQ9H321 NAMPTP3-201ENST00000569273 224 ntBASIC-0.56□□□□□ -2.5
VCX3BQ9H321 MIR5688-201ENST00000580619 83 ntBASIC-0.56□□□□□ -2.5
VCX3BQ9H321 AL008718.3-201ENST00000610217 321 ntBASIC-0.56□□□□□ -2.5
VCX3BQ9H321 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.56□□□□□ -2.5
VCX3BQ9H321 AC084368.1-201ENST00000620935 65 ntBASIC-0.56□□□□□ -2.5
VCX3BQ9H321 RNU1-115P-201ENST00000365329 160 ntBASIC-0.57□□□□□ -2.5
VCX3BQ9H321 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.57□□□□□ -2.5
VCX3BQ9H321 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.57□□□□□ -2.5
VCX3BQ9H321 SNORD110-201ENST00000408189 75 ntBASIC-0.57□□□□□ -2.5
VCX3BQ9H321 BX276092.1-201ENST00000427368 251 ntBASIC-0.57□□□□□ -2.5
VCX3BQ9H321 RNA5SP484-201ENST00000458857 111 ntBASIC-0.57□□□□□ -2.5
VCX3BQ9H321 RNU6-507P-201ENST00000516045 100 ntBASIC-0.57□□□□□ -2.5
VCX3BQ9H321 SNORA25.13-201ENST00000516395 103 ntBASIC-0.57□□□□□ -2.5
VCX3BQ9H321 SNORA20.3-201ENST00000516880 132 ntBASIC-0.57□□□□□ -2.5
VCX3BQ9H321 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.57□□□□□ -2.5
VCX3BQ9H321 AC006006.1-201ENST00000603082 144 ntBASIC-0.57□□□□□ -2.5
VCX3BQ9H321 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.57□□□□□ -2.5
VCX3BQ9H321 MIR6507-201ENST00000613630 70 ntBASIC-0.57□□□□□ -2.5
VCX3BQ9H321 AC084781.2-201ENST00000615568 161 ntBASIC-0.57□□□□□ -2.5
VCX3BQ9H321 RNU4-90P-201ENST00000362773 141 ntBASIC-0.58□□□□□ -2.5
VCX3BQ9H321 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.58□□□□□ -2.5
VCX3BQ9H321 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.58□□□□□ -2.5
VCX3BQ9H321 RNA5SP205-201ENST00000364653 136 ntBASIC-0.58□□□□□ -2.5
VCX3BQ9H321 RNU4-16P-201ENST00000364737 141 ntBASIC-0.58□□□□□ -2.5
VCX3BQ9H321 RNY1P2-201ENST00000364820 117 ntBASIC-0.58□□□□□ -2.5
VCX3BQ9H321 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.58□□□□□ -2.5
VCX3BQ9H321 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.58□□□□□ -2.5
VCX3BQ9H321 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.58□□□□□ -2.5
VCX3BQ9H321 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.58□□□□□ -2.5
VCX3BQ9H321 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.58□□□□□ -2.5
VCX3BQ9H321 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.58□□□□□ -2.5
VCX3BQ9H321 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.58□□□□□ -2.5
VCX3BQ9H321 MIR3129-201ENST00000581095 76 ntBASIC-0.58□□□□□ -2.5
VCX3BQ9H321 AL356055.1-201ENST00000602528 446 ntBASIC-0.58□□□□□ -2.5
VCX3BQ9H321 AC092794.1-201ENST00000612734 582 ntBASIC-0.58□□□□□ -2.5
VCX3BQ9H321 MIR376A1-201ENST00000616574 68 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 200.4 ms