Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SNORD115-36-201ENST00000365629 82 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 RNU6-643P-201ENST00000384018 107 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORA27-201ENST00000384323 126 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORA51.10-201ENST00000384418 136 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORA40.5-201ENST00000391061 128 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 RNU6-1190P-201ENST00000410811 104 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 RNU6-847P-201ENST00000411115 108 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 AC087499.4-201ENST00000448505 178 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 RNU7-120P-201ENST00000459334 63 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 RNU7-21P-201ENST00000459430 62 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORA81.3-201ENST00000517283 198 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 AP002392.1-201ENST00000537692 208 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 MIR4431-201ENST00000579990 94 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 AL365205.2-201ENST00000594586 68 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 SNORD115-40-201ENST00000606510 82 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 MIR8055-201ENST00000610739 97 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 MIR6516-201ENST00000630554 81 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 MIR924-201ENST00000638017 53 ntBASIC0.65□□□□□ -2.31
RSPO3Q9BXY4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 MIR103A2-201ENST00000362154 78 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 RNU6-1082P-201ENST00000364574 107 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 RNU6-312P-201ENST00000364629 107 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 SNORA1.2-201ENST00000365189 134 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 RNU6-768P-201ENST00000384683 107 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 SNORA26-201ENST00000391286 122 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 RNA5SP95-201ENST00000410319 137 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 Y_RNA.793-201ENST00000411222 111 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 AC244023.1-201ENST00000426884 112 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 RNU7-45P-201ENST00000459460 63 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 SNORD116-25-201ENST00000516517 92 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 RNU6-126P-201ENST00000516685 103 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 SCARNA15-202ENST00000516881 127 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 AC133485.1-201ENST00000567176 124 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 AC138907.6-201ENST00000568401 126 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 MIR4714-201ENST00000580728 77 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 AC242498.1-201ENST00000604134 111 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 AC072026.1-201ENST00000605023 201 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 AL589743.1-201ENST00000551932 2712 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 MTND5P32-201ENST00000560711 1802 ntBASIC0.64□□□□□ -2.31
RSPO3Q9BXY4 Y_RNA.29-201ENST00000362570 113 ntBASIC0.63□□□□□ -2.31
RSPO3Q9BXY4 SNORD114-23-201ENST00000363536 72 ntBASIC0.63□□□□□ -2.31
RSPO3Q9BXY4 RNA5SP48-201ENST00000363969 126 ntBASIC0.63□□□□□ -2.31
RSPO3Q9BXY4 Y_RNA.240-201ENST00000364469 95 ntBASIC0.63□□□□□ -2.31
RSPO3Q9BXY4 RNU6-1292P-201ENST00000383856 107 ntBASIC0.63□□□□□ -2.31
RSPO3Q9BXY4 RNU6-1189P-201ENST00000383958 107 ntBASIC0.63□□□□□ -2.31
RSPO3Q9BXY4 Y_RNA.410-201ENST00000383992 113 ntBASIC0.63□□□□□ -2.31
RSPO3Q9BXY4 Y_RNA.785-201ENST00000384290 109 ntBASIC0.63□□□□□ -2.31
RSPO3Q9BXY4 RNU6-125P-201ENST00000384505 107 ntBASIC0.63□□□□□ -2.31
RSPO3Q9BXY4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
RSPO3Q9BXY4 MIR936-201ENST00000401264 98 ntBASIC0.63□□□□□ -2.31
RSPO3Q9BXY4 AL606490.4-201ENST00000423117 127 ntBASIC0.63□□□□□ -2.31
RSPO3Q9BXY4 HMGN1P33-201ENST00000432945 451 ntBASIC0.63□□□□□ -2.31
RSPO3Q9BXY4 RNU7-67P-201ENST00000459003 62 ntBASIC0.63□□□□□ -2.31
RSPO3Q9BXY4 RPS29P24-201ENST00000486345 171 ntBASIC0.63□□□□□ -2.31
RSPO3Q9BXY4 PSMC1P5-201ENST00000512850 177 ntBASIC0.63□□□□□ -2.31
RSPO3Q9BXY4 MIR5197-201ENST00000583721 112 ntBASIC0.63□□□□□ -2.31
RSPO3Q9BXY4 SEPT14P17-201ENST00000617978 177 ntBASIC0.63□□□□□ -2.31
RSPO3Q9BXY4 MIR3658-201ENST00000636291 56 ntBASIC0.63□□□□□ -2.31
RSPO3Q9BXY4 MIR342-201ENST00000362212 99 ntBASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 Y_RNA.330-201ENST00000365230 109 ntBASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 SNORA80D-201ENST00000384488 135 ntBASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 Y_RNA.542-201ENST00000384641 111 ntBASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 MIR19B1-201ENST00000384829 87 ntBASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 PCNPP3-201ENST00000393579 471 ntBASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 SNORA79-201ENST00000408376 140 ntBASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 RNU6-1135P-201ENST00000411083 103 ntBASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 RNU2-11P-201ENST00000459191 187 ntBASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 SNORD124-201ENST00000459577 104 ntBASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 RNU6-998P-201ENST00000515894 101 ntBASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 RNU7-121P-201ENST00000516604 62 ntBASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 RNU6-794P-201ENST00000517261 64 ntBASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 AC036111.3-201ENST00000526389 112 ntBASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 AC023827.1-201ENST00000569247 97 ntBASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 MIR3671-201ENST00000580455 88 ntBASIC0.62□□□□□ -2.31
RSPO3Q9BXY4 RNU4-84P-201ENST00000364200 139 ntBASIC0.61□□□□□ -2.31
RSPO3Q9BXY4 Y_RNA.351-201ENST00000365436 96 ntBASIC0.61□□□□□ -2.31
RSPO3Q9BXY4 RNU6-597P-201ENST00000365620 102 ntBASIC0.61□□□□□ -2.31
RSPO3Q9BXY4 Y_RNA.441-201ENST00000384123 112 ntBASIC0.61□□□□□ -2.31
RSPO3Q9BXY4 RNU6-1067P-201ENST00000384752 107 ntBASIC0.61□□□□□ -2.31
RSPO3Q9BXY4 MIR624-201ENST00000385217 97 ntBASIC0.61□□□□□ -2.31
RSPO3Q9BXY4 SNORA26.6-201ENST00000391256 115 ntBASIC0.61□□□□□ -2.31
RSPO3Q9BXY4 RNU6-588P-201ENST00000410281 105 ntBASIC0.61□□□□□ -2.31
RSPO3Q9BXY4 AC063976.4-201ENST00000421971 163 ntBASIC0.61□□□□□ -2.31
RSPO3Q9BXY4 AL035398.1-201ENST00000430869 322 ntBASIC0.61□□□□□ -2.31
RSPO3Q9BXY4 AC108059.2-201ENST00000434626 151 ntBASIC0.61□□□□□ -2.31
RSPO3Q9BXY4 RNU7-73P-201ENST00000458743 63 ntBASIC0.61□□□□□ -2.31
RSPO3Q9BXY4 snoU13.16-201ENST00000459350 104 ntBASIC0.61□□□□□ -2.31
RSPO3Q9BXY4 snoU13.21-201ENST00000459368 105 ntBASIC0.61□□□□□ -2.31
RSPO3Q9BXY4 AC107297.1-201ENST00000459991 176 ntBASIC0.61□□□□□ -2.31
RSPO3Q9BXY4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.61□□□□□ -2.31
RSPO3Q9BXY4 AC131055.1-201ENST00000584626 316 ntBASIC0.61□□□□□ -2.31
RSPO3Q9BXY4 uc_338.6-201ENST00000613544 171 ntBASIC0.61□□□□□ -2.31
RSPO3Q9BXY4 AC106800.4-201ENST00000614905 153 ntBASIC0.61□□□□□ -2.31
RSPO3Q9BXY4 MIR6835-201ENST00000621552 64 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms