Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
LRFN3Q9BTN0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LRFN3Q9BTN0 RNU6-439P-201ENST00000384188 106 ntBASIC1.92□□□□□ -2.1
LRFN3Q9BTN0 SNORA51.10-201ENST00000384418 136 ntBASIC1.92□□□□□ -2.1
LRFN3Q9BTN0 RNU6-1104P-201ENST00000384723 104 ntBASIC1.92□□□□□ -2.1
LRFN3Q9BTN0 MIR759-201ENST00000390224 91 ntBASIC1.92□□□□□ -2.1
LRFN3Q9BTN0 AL161935.2-201ENST00000414627 60 ntBASIC1.92□□□□□ -2.1
LRFN3Q9BTN0 RNU7-80P-201ENST00000459562 61 ntBASIC1.92□□□□□ -2.1
LRFN3Q9BTN0 AC022523.2-201ENST00000561045 150 ntBASIC1.92□□□□□ -2.1
LRFN3Q9BTN0 MIR4305-201ENST00000583252 102 ntBASIC1.92□□□□□ -2.1
LRFN3Q9BTN0 HSPE1P19-201ENST00000603327 295 ntBASIC1.92□□□□□ -2.1
LRFN3Q9BTN0 AC091932.4-201ENST00000623386 200 ntBASIC1.92□□□□□ -2.1
LRFN3Q9BTN0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.92□□□□□ -2.1
LRFN3Q9BTN0 AL596211.1-201ENST00000569873 2277 ntBASIC1.92□□□□□ -2.1
LRFN3Q9BTN0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LRFN3Q9BTN0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
LRFN3Q9BTN0 MIRLET7G-201ENST00000362280 84 ntBASIC1.91□□□□□ -2.1
LRFN3Q9BTN0 U8.6-201ENST00000364939 135 ntBASIC1.91□□□□□ -2.1
LRFN3Q9BTN0 Y_RNA.344-201ENST00000365381 112 ntBASIC1.91□□□□□ -2.1
LRFN3Q9BTN0 RNU6-203P-201ENST00000384038 104 ntBASIC1.91□□□□□ -2.1
LRFN3Q9BTN0 SNORD38C-201ENST00000384381 69 ntBASIC1.91□□□□□ -2.1
LRFN3Q9BTN0 RNU2-40P-201ENST00000410833 196 ntBASIC1.91□□□□□ -2.1
LRFN3Q9BTN0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.91□□□□□ -2.1
LRFN3Q9BTN0 AC079804.2-201ENST00000490376 200 ntBASIC1.91□□□□□ -2.1
LRFN3Q9BTN0 AC090255.1-201ENST00000495779 349 ntBASIC1.91□□□□□ -2.1
LRFN3Q9BTN0 AC008834.1-201ENST00000511612 175 ntBASIC1.91□□□□□ -2.1
LRFN3Q9BTN0 RNU7-123P-201ENST00000515911 60 ntBASIC1.91□□□□□ -2.1
LRFN3Q9BTN0 RNA5SP61-201ENST00000516453 100 ntBASIC1.91□□□□□ -2.1
LRFN3Q9BTN0 AC068339.1-201ENST00000526965 141 ntBASIC1.91□□□□□ -2.1
LRFN3Q9BTN0 SNORA77B-201ENST00000578179 125 ntBASIC1.91□□□□□ -2.1
LRFN3Q9BTN0 MIR5009-201ENST00000578736 100 ntBASIC1.91□□□□□ -2.1
LRFN3Q9BTN0 SNRPGP19-201ENST00000603826 189 ntBASIC1.91□□□□□ -2.1
LRFN3Q9BTN0 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.91□□□□□ -2.1
LRFN3Q9BTN0 AL359851.1-201ENST00000569460 4997 ntBASIC1.91□□□□□ -2.1
LRFN3Q9BTN0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LRFN3Q9BTN0 Y_RNA.454-201ENST00000384224 113 ntBASIC1.9□□□□□ -2.11
LRFN3Q9BTN0 RNU6-1113P-201ENST00000384348 107 ntBASIC1.9□□□□□ -2.11
LRFN3Q9BTN0 MIR548D2-201ENST00000384955 97 ntBASIC1.9□□□□□ -2.11
LRFN3Q9BTN0 MIR452-201ENST00000385020 85 ntBASIC1.9□□□□□ -2.11
LRFN3Q9BTN0 HMGN1P33-201ENST00000432945 451 ntBASIC1.9□□□□□ -2.11
LRFN3Q9BTN0 RNU2-35P-201ENST00000516446 142 ntBASIC1.9□□□□□ -2.11
LRFN3Q9BTN0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.9□□□□□ -2.11
LRFN3Q9BTN0 MIR5089-201ENST00000580047 84 ntBASIC1.9□□□□□ -2.11
LRFN3Q9BTN0 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.9□□□□□ -2.11
LRFN3Q9BTN0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LRFN3Q9BTN0 MIR342-201ENST00000362212 99 ntBASIC1.89□□□□□ -2.11
LRFN3Q9BTN0 Y_RNA.494-201ENST00000384432 111 ntBASIC1.89□□□□□ -2.11
LRFN3Q9BTN0 MIR513A1-201ENST00000385138 129 ntBASIC1.89□□□□□ -2.11
LRFN3Q9BTN0 SNX2P2-201ENST00000424553 323 ntBASIC1.89□□□□□ -2.11
LRFN3Q9BTN0 SNORA31.4-201ENST00000516049 129 ntBASIC1.89□□□□□ -2.11
LRFN3Q9BTN0 MIR4778-201ENST00000577635 80 ntBASIC1.89□□□□□ -2.11
LRFN3Q9BTN0 MIR502-201ENST00000606349 86 ntBASIC1.89□□□□□ -2.11
LRFN3Q9BTN0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.89□□□□□ -2.11
LRFN3Q9BTN0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.89□□□□□ -2.11
LRFN3Q9BTN0 AL442644.1-201ENST00000454390 3105 ntBASIC1.89□□□□□ -2.11
LRFN3Q9BTN0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
LRFN3Q9BTN0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LRFN3Q9BTN0 Y_RNA.241-201ENST00000364470 117 ntBASIC1.88□□□□□ -2.11
LRFN3Q9BTN0 RNU4-16P-201ENST00000364737 141 ntBASIC1.88□□□□□ -2.11
LRFN3Q9BTN0 RNU6-1131P-201ENST00000364955 107 ntBASIC1.88□□□□□ -2.11
LRFN3Q9BTN0 SNORA27-201ENST00000384323 126 ntBASIC1.88□□□□□ -2.11
LRFN3Q9BTN0 SNORA19.1-201ENST00000410656 129 ntBASIC1.88□□□□□ -2.11
LRFN3Q9BTN0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.88□□□□□ -2.11
LRFN3Q9BTN0 AC015922.2-201ENST00000435593 184 ntBASIC1.88□□□□□ -2.11
LRFN3Q9BTN0 RNU6-109P-201ENST00000516364 107 ntBASIC1.88□□□□□ -2.11
LRFN3Q9BTN0 SNORA40.13-201ENST00000516379 120 ntBASIC1.88□□□□□ -2.11
LRFN3Q9BTN0 RNU6-184P-201ENST00000516514 107 ntBASIC1.88□□□□□ -2.11
LRFN3Q9BTN0 MIR4255-201ENST00000579351 72 ntBASIC1.88□□□□□ -2.11
LRFN3Q9BTN0 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.88□□□□□ -2.11
LRFN3Q9BTN0 SNORA7.1-201ENST00000363750 139 ntBASIC1.87□□□□□ -2.11
LRFN3Q9BTN0 RNA5SP259-201ENST00000365541 109 ntBASIC1.87□□□□□ -2.11
LRFN3Q9BTN0 MIR590-201ENST00000385008 97 ntBASIC1.87□□□□□ -2.11
LRFN3Q9BTN0 MIR934-201ENST00000401241 83 ntBASIC1.87□□□□□ -2.11
LRFN3Q9BTN0 HMGN2P38-201ENST00000423806 265 ntBASIC1.87□□□□□ -2.11
LRFN3Q9BTN0 RNU6-998P-201ENST00000515894 101 ntBASIC1.87□□□□□ -2.11
LRFN3Q9BTN0 RNU6-322P-201ENST00000516010 103 ntBASIC1.87□□□□□ -2.11
LRFN3Q9BTN0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.87□□□□□ -2.11
LRFN3Q9BTN0 AC015688.6-201ENST00000577737 104 ntBASIC1.87□□□□□ -2.11
LRFN3Q9BTN0 MIR3163-201ENST00000581592 73 ntBASIC1.87□□□□□ -2.11
LRFN3Q9BTN0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
LRFN3Q9BTN0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-34-201ENST00000362441 82 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-12-201ENST00000362583 82 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-29-201ENST00000362834 82 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-9-201ENST00000362912 82 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-21-201ENST00000362963 81 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 Y_RNA.78-201ENST00000362970 110 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-14-201ENST00000363090 81 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-13-201ENST00000363358 82 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-41-201ENST00000363608 82 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-11-201ENST00000363616 82 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-5-201ENST00000363633 82 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-39-201ENST00000363694 82 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-4-201ENST00000363810 82 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-16-201ENST00000363887 82 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-6-201ENST00000363942 82 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-42-201ENST00000364273 82 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-15-201ENST00000364809 81 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-1-201ENST00000364961 82 ntBASIC1.86□□□□□ -2.11
LRFN3Q9BTN0 SNORD115-26-201ENST00000365067 82 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms