Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 MIR598-201ENST00000384868 97 ntBASIC0.51□□□□□ -2.33
SSX3Q99909 MIR938-201ENST00000401216 83 ntBASIC0.51□□□□□ -2.33
SSX3Q99909 RNA5SP261-201ENST00000410536 106 ntBASIC0.51□□□□□ -2.33
SSX3Q99909 RNU6-1132P-201ENST00000459214 107 ntBASIC0.51□□□□□ -2.33
SSX3Q99909 RNU7-80P-201ENST00000459562 61 ntBASIC0.51□□□□□ -2.33
SSX3Q99909 RNA5SP436-201ENST00000516020 115 ntBASIC0.51□□□□□ -2.33
SSX3Q99909 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
SSX3Q99909 Y_RNA.288-201ENST00000364854 92 ntBASIC0.5□□□□□ -2.33
SSX3Q99909 Y_RNA.292-201ENST00000364904 97 ntBASIC0.5□□□□□ -2.33
SSX3Q99909 RNU6-364P-201ENST00000384387 107 ntBASIC0.5□□□□□ -2.33
SSX3Q99909 MIR92A1-201ENST00000385233 78 ntBASIC0.5□□□□□ -2.33
SSX3Q99909 SNORD12C-201ENST00000386307 89 ntBASIC0.5□□□□□ -2.33
SSX3Q99909 MIR548H3-201ENST00000408771 118 ntBASIC0.5□□□□□ -2.33
SSX3Q99909 RNU2-38P-201ENST00000410856 79 ntBASIC0.5□□□□□ -2.33
SSX3Q99909 Y_RNA.618-201ENST00000410949 107 ntBASIC0.5□□□□□ -2.33
SSX3Q99909 RNU6-177P-201ENST00000411257 104 ntBASIC0.5□□□□□ -2.33
SSX3Q99909 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.5□□□□□ -2.33
SSX3Q99909 RNU7-56P-201ENST00000458744 62 ntBASIC0.5□□□□□ -2.33
SSX3Q99909 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.5□□□□□ -2.33
SSX3Q99909 Y_RNA.76-201ENST00000362931 109 ntBASIC0.49□□□□□ -2.33
SSX3Q99909 RNY1P8-201ENST00000383970 114 ntBASIC0.49□□□□□ -2.33
SSX3Q99909 Y_RNA.454-201ENST00000384224 113 ntBASIC0.49□□□□□ -2.33
SSX3Q99909 RNU6-1237P-201ENST00000384777 107 ntBASIC0.49□□□□□ -2.33
SSX3Q99909 MIR140-201ENST00000385282 100 ntBASIC0.49□□□□□ -2.33
SSX3Q99909 MIR1257-201ENST00000408490 117 ntBASIC0.49□□□□□ -2.33
SSX3Q99909 AL121914.1-201ENST00000450188 156 ntBASIC0.49□□□□□ -2.33
SSX3Q99909 MIR4744-201ENST00000581563 82 ntBASIC0.49□□□□□ -2.33
SSX3Q99909 MIR5197-201ENST00000583721 112 ntBASIC0.49□□□□□ -2.33
SSX3Q99909 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.49□□□□□ -2.33
SSX3Q99909 MIR6513-201ENST00000621188 64 ntBASIC0.49□□□□□ -2.33
SSX3Q99909 MIR6717-201ENST00000622747 73 ntBASIC0.49□□□□□ -2.33
SSX3Q99909 RNA5SP347-201ENST00000362445 119 ntBASIC0.48□□□□□ -2.33
SSX3Q99909 RNU4-45P-201ENST00000365469 141 ntBASIC0.48□□□□□ -2.33
SSX3Q99909 MIR125B2-201ENST00000385128 89 ntBASIC0.48□□□□□ -2.33
SSX3Q99909 RNU4-43P-201ENST00000410628 137 ntBASIC0.48□□□□□ -2.33
SSX3Q99909 SNORD127-201ENST00000458892 86 ntBASIC0.48□□□□□ -2.33
SSX3Q99909 RNU7-185P-201ENST00000459215 60 ntBASIC0.48□□□□□ -2.33
SSX3Q99909 RNU7-45P-201ENST00000459460 63 ntBASIC0.48□□□□□ -2.33
SSX3Q99909 MIR3612-201ENST00000579753 87 ntBASIC0.48□□□□□ -2.33
SSX3Q99909 AC011921.3-201ENST00000605540 361 ntBASIC0.48□□□□□ -2.33
SSX3Q99909 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.48□□□□□ -2.33
SSX3Q99909 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.48□□□□□ -2.33
SSX3Q99909 MIR376A2-201ENST00000636782 80 ntBASIC0.48□□□□□ -2.33
SSX3Q99909 AL596211.1-201ENST00000569873 2277 ntBASIC0.48□□□□□ -2.33
SSX3Q99909 MIR18A-201ENST00000362310 71 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
SSX3Q99909 RNU6-1292P-201ENST00000383856 107 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 MIR563-201ENST00000385080 79 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 MIR613-201ENST00000385248 95 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 MT-TF-201ENST00000387314 71 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 RNU6-1319P-201ENST00000390855 104 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 RNU6-747P-201ENST00000390928 104 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 RNU6-241P-201ENST00000391148 104 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 SNORA26.6-201ENST00000391256 115 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 RNU6-447P-201ENST00000410293 104 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 RNU6-1118P-201ENST00000410382 104 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 RNU6-1076P-201ENST00000410397 104 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 RNU6-355P-201ENST00000410427 104 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 RNU6-791P-201ENST00000410467 104 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 RNU6-705P-201ENST00000410601 104 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 RNU6-1100P-201ENST00000410691 104 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 RNU6-860P-201ENST00000410860 104 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 RNU6-1217P-201ENST00000411276 104 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 RNU6-785P-201ENST00000411324 104 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 AL358176.2-201ENST00000425769 204 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 RNU7-70P-201ENST00000516941 66 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 AL365205.2-201ENST00000594586 68 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 U6.90-201ENST00000614007 104 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 U6.70-201ENST00000620287 104 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 AC091932.4-201ENST00000623386 200 ntBASIC0.47□□□□□ -2.33
SSX3Q99909 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
SSX3Q99909 Y_RNA.308-201ENST00000365043 101 ntBASIC0.46□□□□□ -2.34
SSX3Q99909 SEPT7P4-201ENST00000437076 306 ntBASIC0.46□□□□□ -2.34
SSX3Q99909 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
SSX3Q99909 SNORD116-25-201ENST00000516517 92 ntBASIC0.46□□□□□ -2.34
SSX3Q99909 RNU7-156P-201ENST00000517214 74 ntBASIC0.46□□□□□ -2.34
SSX3Q99909 MIR3152-201ENST00000579801 74 ntBASIC0.46□□□□□ -2.34
SSX3Q99909 AL162730.1-201ENST00000605734 292 ntBASIC0.46□□□□□ -2.34
SSX3Q99909 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.46□□□□□ -2.34
SSX3Q99909 PVT1_3.1-201ENST00000620853 95 ntBASIC0.46□□□□□ -2.34
SSX3Q99909 MIR30D-201ENST00000362283 70 ntBASIC0.45□□□□□ -2.34
SSX3Q99909 SNORD27-201ENST00000363981 72 ntBASIC0.45□□□□□ -2.34
SSX3Q99909 RNU6-578P-201ENST00000390980 103 ntBASIC0.45□□□□□ -2.34
SSX3Q99909 RNU6-493P-201ENST00000391321 108 ntBASIC0.45□□□□□ -2.34
SSX3Q99909 RPL39P25-201ENST00000449384 154 ntBASIC0.45□□□□□ -2.34
SSX3Q99909 RNU7-102P-201ENST00000458948 62 ntBASIC0.45□□□□□ -2.34
SSX3Q99909 RNY3P16-201ENST00000516338 101 ntBASIC0.45□□□□□ -2.34
SSX3Q99909 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.45□□□□□ -2.34
SSX3Q99909 AL360085.1-201ENST00000604713 532 ntBASIC0.45□□□□□ -2.34
SSX3Q99909 RNU6-342P-201ENST00000384521 104 ntBASIC0.44□□□□□ -2.34
SSX3Q99909 SNORA20-201ENST00000384662 132 ntBASIC0.44□□□□□ -2.34
SSX3Q99909 Y_RNA.556-201ENST00000384677 113 ntBASIC0.44□□□□□ -2.34
SSX3Q99909 MIR936-201ENST00000401264 98 ntBASIC0.44□□□□□ -2.34
SSX3Q99909 MIR1302-3-201ENST00000408128 138 ntBASIC0.44□□□□□ -2.34
SSX3Q99909 RNA5SP237-201ENST00000410414 113 ntBASIC0.44□□□□□ -2.34
SSX3Q99909 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.44□□□□□ -2.34
SSX3Q99909 Y_RNA.797-201ENST00000515977 94 ntBASIC0.44□□□□□ -2.34
SSX3Q99909 RNU6-229P-201ENST00000516614 102 ntBASIC0.44□□□□□ -2.34
SSX3Q99909 MIR378D2-201ENST00000580636 98 ntBASIC0.44□□□□□ -2.34
SSX3Q99909 AC090897.1-201ENST00000580909 226 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms