Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 Y_RNA.690-201ENST00000516603 95 ntBASIC1.17□□□□□ -2.22
NPAS1Q99742 MIR3660-201ENST00000584845 100 ntBASIC1.17□□□□□ -2.22
NPAS1Q99742 HSPE1P19-201ENST00000603327 295 ntBASIC1.17□□□□□ -2.22
NPAS1Q99742 MIR6717-201ENST00000622747 73 ntBASIC1.17□□□□□ -2.22
NPAS1Q99742 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
NPAS1Q99742 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
NPAS1Q99742 RNU6-690P-201ENST00000365242 106 ntBASIC1.16□□□□□ -2.22
NPAS1Q99742 Y_RNA.488-201ENST00000384403 102 ntBASIC1.16□□□□□ -2.22
NPAS1Q99742 RNU6-125P-201ENST00000384505 107 ntBASIC1.16□□□□□ -2.22
NPAS1Q99742 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
NPAS1Q99742 RNU6-460P-201ENST00000391158 108 ntBASIC1.16□□□□□ -2.22
NPAS1Q99742 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.16□□□□□ -2.22
NPAS1Q99742 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.16□□□□□ -2.22
NPAS1Q99742 AC021613.1-201ENST00000623880 111 ntBASIC1.16□□□□□ -2.22
NPAS1Q99742 Z97988.1-201ENST00000637697 135 ntBASIC1.16□□□□□ -2.22
NPAS1Q99742 SNORD113.3-201ENST00000364630 78 ntBASIC1.15□□□□□ -2.23
NPAS1Q99742 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.15□□□□□ -2.23
NPAS1Q99742 MIR758-201ENST00000390227 88 ntBASIC1.15□□□□□ -2.23
NPAS1Q99742 RNU6-1319P-201ENST00000390855 104 ntBASIC1.15□□□□□ -2.23
NPAS1Q99742 RNU6-747P-201ENST00000390928 104 ntBASIC1.15□□□□□ -2.23
NPAS1Q99742 RNU6-241P-201ENST00000391148 104 ntBASIC1.15□□□□□ -2.23
NPAS1Q99742 RNU6-177P-201ENST00000411257 104 ntBASIC1.15□□□□□ -2.23
NPAS1Q99742 RNU6-893P-201ENST00000458841 100 ntBASIC1.15□□□□□ -2.23
NPAS1Q99742 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.15□□□□□ -2.23
NPAS1Q99742 snoU13.31-201ENST00000607291 104 ntBASIC1.15□□□□□ -2.23
NPAS1Q99742 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
NPAS1Q99742 Y_RNA.120-201ENST00000363304 110 ntBASIC1.14□□□□□ -2.23
NPAS1Q99742 Y_RNA.170-201ENST00000363746 110 ntBASIC1.14□□□□□ -2.23
NPAS1Q99742 RNY1P11-201ENST00000363759 113 ntBASIC1.14□□□□□ -2.23
NPAS1Q99742 MIR618-201ENST00000385287 98 ntBASIC1.14□□□□□ -2.23
NPAS1Q99742 RNU6-613P-201ENST00000410412 108 ntBASIC1.14□□□□□ -2.23
NPAS1Q99742 RNU6-602P-201ENST00000411155 105 ntBASIC1.14□□□□□ -2.23
NPAS1Q99742 AC067940.1-201ENST00000458411 300 ntBASIC1.14□□□□□ -2.23
NPAS1Q99742 Y_RNA.686-201ENST00000516548 134 ntBASIC1.14□□□□□ -2.23
NPAS1Q99742 MIR4264-201ENST00000583520 66 ntBASIC1.14□□□□□ -2.23
NPAS1Q99742 AL353770.2-201ENST00000620024 78 ntBASIC1.14□□□□□ -2.23
NPAS1Q99742 AC027335.2-201ENST00000624030 375 ntBASIC1.14□□□□□ -2.23
NPAS1Q99742 Y_RNA.343-201ENST00000365354 112 ntBASIC1.13□□□□□ -2.23
NPAS1Q99742 RNU6-1237P-201ENST00000384777 107 ntBASIC1.13□□□□□ -2.23
NPAS1Q99742 RNU7-62P-201ENST00000458856 62 ntBASIC1.13□□□□□ -2.23
NPAS1Q99742 RN7SKP179-201ENST00000516126 217 ntBASIC1.13□□□□□ -2.23
NPAS1Q99742 RNU6-255P-201ENST00000516957 105 ntBASIC1.13□□□□□ -2.23
NPAS1Q99742 RNA5SP404-201ENST00000517118 132 ntBASIC1.13□□□□□ -2.23
NPAS1Q99742 AP001328.1-201ENST00000528550 176 ntBASIC1.13□□□□□ -2.23
NPAS1Q99742 MIR4781-201ENST00000585250 76 ntBASIC1.13□□□□□ -2.23
NPAS1Q99742 AL157834.3-201ENST00000615543 103 ntBASIC1.13□□□□□ -2.23
NPAS1Q99742 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.13□□□□□ -2.23
NPAS1Q99742 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
NPAS1Q99742 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
NPAS1Q99742 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.12□□□□□ -2.23
NPAS1Q99742 SNORA22.1-201ENST00000362701 134 ntBASIC1.12□□□□□ -2.23
NPAS1Q99742 Y_RNA.251-201ENST00000364551 99 ntBASIC1.12□□□□□ -2.23
NPAS1Q99742 RNU6-309P-201ENST00000364573 106 ntBASIC1.12□□□□□ -2.23
NPAS1Q99742 RNU6-915P-201ENST00000364943 103 ntBASIC1.12□□□□□ -2.23
NPAS1Q99742 MIR942-201ENST00000401111 86 ntBASIC1.12□□□□□ -2.23
NPAS1Q99742 SNORD111-201ENST00000408139 94 ntBASIC1.12□□□□□ -2.23
NPAS1Q99742 RNA5SP237-201ENST00000410414 113 ntBASIC1.12□□□□□ -2.23
NPAS1Q99742 RNU7-200P-201ENST00000516105 62 ntBASIC1.12□□□□□ -2.23
NPAS1Q99742 Y_RNA.692-201ENST00000516627 105 ntBASIC1.12□□□□□ -2.23
NPAS1Q99742 AC036111.3-201ENST00000526389 112 ntBASIC1.12□□□□□ -2.23
NPAS1Q99742 AC133485.4-201ENST00000561835 220 ntBASIC1.12□□□□□ -2.23
NPAS1Q99742 AC138907.4-201ENST00000570107 226 ntBASIC1.12□□□□□ -2.23
NPAS1Q99742 MIR4498-201ENST00000577599 66 ntBASIC1.12□□□□□ -2.23
NPAS1Q99742 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.11□□□□□ -2.23
NPAS1Q99742 RNU6-53P-201ENST00000365367 106 ntBASIC1.11□□□□□ -2.23
NPAS1Q99742 MIR588-201ENST00000384900 83 ntBASIC1.11□□□□□ -2.23
NPAS1Q99742 SNORD12C-201ENST00000386307 89 ntBASIC1.11□□□□□ -2.23
NPAS1Q99742 MT-TN-201ENST00000387400 73 ntBASIC1.11□□□□□ -2.23
NPAS1Q99742 AL603914.1-201ENST00000401964 204 ntBASIC1.11□□□□□ -2.23
NPAS1Q99742 MIR548I1-201ENST00000408810 149 ntBASIC1.11□□□□□ -2.23
NPAS1Q99742 AL022718.1-201ENST00000412004 84 ntBASIC1.11□□□□□ -2.23
NPAS1Q99742 AC244023.1-201ENST00000426884 112 ntBASIC1.11□□□□□ -2.23
NPAS1Q99742 RNU6-240P-201ENST00000516098 97 ntBASIC1.11□□□□□ -2.23
NPAS1Q99742 RNA5SP236-201ENST00000516169 116 ntBASIC1.11□□□□□ -2.23
NPAS1Q99742 RNU6-346P-201ENST00000516288 111 ntBASIC1.11□□□□□ -2.23
NPAS1Q99742 AC242498.1-201ENST00000604134 111 ntBASIC1.11□□□□□ -2.23
NPAS1Q99742 RNU6-94P-201ENST00000607728 107 ntBASIC1.11□□□□□ -2.23
NPAS1Q99742 AC011603.4-201ENST00000611325 277 ntBASIC1.11□□□□□ -2.23
NPAS1Q99742 AC106800.4-201ENST00000614905 153 ntBASIC1.11□□□□□ -2.23
NPAS1Q99742 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
NPAS1Q99742 Y_RNA.338-201ENST00000365320 114 ntBASIC1.1□□□□□ -2.23
NPAS1Q99742 Y_RNA.420-201ENST00000384043 110 ntBASIC1.1□□□□□ -2.23
NPAS1Q99742 SNORA26.6-201ENST00000391256 115 ntBASIC1.1□□□□□ -2.23
NPAS1Q99742 RPL39P25-201ENST00000449384 154 ntBASIC1.1□□□□□ -2.23
NPAS1Q99742 RNA5SP272-201ENST00000516095 111 ntBASIC1.1□□□□□ -2.23
NPAS1Q99742 Y_RNA.757-201ENST00000578934 114 ntBASIC1.1□□□□□ -2.23
NPAS1Q99742 RNU6-349P-201ENST00000362402 107 ntBASIC1.09□□□□□ -2.23
NPAS1Q99742 RNU6-508P-201ENST00000363231 103 ntBASIC1.09□□□□□ -2.23
NPAS1Q99742 Y_RNA.168-201ENST00000363740 102 ntBASIC1.09□□□□□ -2.23
NPAS1Q99742 SNORD124-201ENST00000459577 104 ntBASIC1.09□□□□□ -2.23
NPAS1Q99742 RNU6-1212P-201ENST00000517023 104 ntBASIC1.09□□□□□ -2.23
NPAS1Q99742 RNU2-60P-201ENST00000517290 128 ntBASIC1.09□□□□□ -2.23
NPAS1Q99742 AC021443.1-201ENST00000604478 211 ntBASIC1.09□□□□□ -2.23
NPAS1Q99742 RNU6-934P-201ENST00000365154 107 ntBASIC1.08□□□□□ -2.24
NPAS1Q99742 Y_RNA.430-201ENST00000384081 110 ntBASIC1.08□□□□□ -2.24
NPAS1Q99742 MIR200A-201ENST00000384875 90 ntBASIC1.08□□□□□ -2.24
NPAS1Q99742 MIR569-201ENST00000385228 96 ntBASIC1.08□□□□□ -2.24
NPAS1Q99742 FABP5P4-201ENST00000437203 171 ntBASIC1.08□□□□□ -2.24
NPAS1Q99742 RNU7-197P-201ENST00000458836 62 ntBASIC1.08□□□□□ -2.24
NPAS1Q99742 RNU7-113P-201ENST00000459273 62 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms