Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 AC073261.1-201ENST00000429409 121 ntBASIC0.13□□□□□ -2.39
VPS35Q96QK1 SCARNA24.2-201ENST00000516968 130 ntBASIC0.13□□□□□ -2.39
VPS35Q96QK1 AP003327.1-201ENST00000529684 127 ntBASIC0.13□□□□□ -2.39
VPS35Q96QK1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.13□□□□□ -2.39
VPS35Q96QK1 AC023932.2-201ENST00000603176 175 ntBASIC0.13□□□□□ -2.39
VPS35Q96QK1 AL662814.1-201ENST00000617364 121 ntBASIC0.13□□□□□ -2.39
VPS35Q96QK1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.13□□□□□ -2.39
VPS35Q96QK1 SNORA36.1-201ENST00000363424 132 ntBASIC0.12□□□□□ -2.39
VPS35Q96QK1 Y_RNA.152-201ENST00000363578 100 ntBASIC0.12□□□□□ -2.39
VPS35Q96QK1 Y_RNA.351-201ENST00000365436 96 ntBASIC0.12□□□□□ -2.39
VPS35Q96QK1 MT-TT-201ENST00000387460 66 ntBASIC0.12□□□□□ -2.39
VPS35Q96QK1 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
VPS35Q96QK1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.12□□□□□ -2.39
VPS35Q96QK1 MTND5P22-201ENST00000458380 195 ntBASIC0.12□□□□□ -2.39
VPS35Q96QK1 RNU6-863P-201ENST00000515989 104 ntBASIC0.12□□□□□ -2.39
VPS35Q96QK1 RNU6-469P-201ENST00000516253 101 ntBASIC0.12□□□□□ -2.39
VPS35Q96QK1 RNU6-1338P-201ENST00000516328 91 ntBASIC0.12□□□□□ -2.39
VPS35Q96QK1 Y_RNA.128-201ENST00000363391 112 ntBASIC0.11□□□□□ -2.39
VPS35Q96QK1 SNORD114-26-201ENST00000363543 72 ntBASIC0.11□□□□□ -2.39
VPS35Q96QK1 SNORA1-201ENST00000384107 130 ntBASIC0.11□□□□□ -2.39
VPS35Q96QK1 Y_RNA.617-201ENST00000410920 90 ntBASIC0.11□□□□□ -2.39
VPS35Q96QK1 Y_RNA.711-201ENST00000516993 102 ntBASIC0.11□□□□□ -2.39
VPS35Q96QK1 MIR376A2-201ENST00000636782 80 ntBASIC0.11□□□□□ -2.39
VPS35Q96QK1 MIR330-201ENST00000362196 94 ntBASIC0.1□□□□□ -2.39
VPS35Q96QK1 Y_RNA.117-201ENST00000363294 101 ntBASIC0.1□□□□□ -2.39
VPS35Q96QK1 RNU6-815P-201ENST00000384080 113 ntBASIC0.1□□□□□ -2.39
VPS35Q96QK1 Y_RNA.460-201ENST00000384255 102 ntBASIC0.1□□□□□ -2.39
VPS35Q96QK1 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
VPS35Q96QK1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.1□□□□□ -2.39
VPS35Q96QK1 SNRPGP8-201ENST00000454064 226 ntBASIC0.1□□□□□ -2.39
VPS35Q96QK1 AC069113.3-201ENST00000521019 150 ntBASIC0.1□□□□□ -2.39
VPS35Q96QK1 MIR4680-201ENST00000580906 66 ntBASIC0.1□□□□□ -2.39
VPS35Q96QK1 MIR4514-201ENST00000581410 57 ntBASIC0.1□□□□□ -2.39
VPS35Q96QK1 AC134503.1-201ENST00000633048 54 ntBASIC0.1□□□□□ -2.39
VPS35Q96QK1 Y_RNA.23-201ENST00000362496 106 ntBASIC0.09□□□□□ -2.4
VPS35Q96QK1 RNU4-67P-201ENST00000364569 141 ntBASIC0.09□□□□□ -2.4
VPS35Q96QK1 RNU6-597P-201ENST00000365620 102 ntBASIC0.09□□□□□ -2.4
VPS35Q96QK1 Y_RNA.476-201ENST00000384347 108 ntBASIC0.09□□□□□ -2.4
VPS35Q96QK1 MIR644A-201ENST00000385262 94 ntBASIC0.09□□□□□ -2.4
VPS35Q96QK1 AL606845.1-201ENST00000404881 255 ntBASIC0.09□□□□□ -2.4
VPS35Q96QK1 RNU6-1203P-201ENST00000410703 110 ntBASIC0.09□□□□□ -2.4
VPS35Q96QK1 AC113618.1-201ENST00000416747 285 ntBASIC0.09□□□□□ -2.4
VPS35Q96QK1 AL512326.2-201ENST00000426359 151 ntBASIC0.09□□□□□ -2.4
VPS35Q96QK1 MTATP6P23-201ENST00000440153 476 ntBASIC0.09□□□□□ -2.4
VPS35Q96QK1 RNU7-80P-201ENST00000459562 61 ntBASIC0.09□□□□□ -2.4
VPS35Q96QK1 RNA5SP480-201ENST00000516840 109 ntBASIC0.09□□□□□ -2.4
VPS35Q96QK1 MIR5197-201ENST00000583721 112 ntBASIC0.09□□□□□ -2.4
VPS35Q96QK1 MIR6718-201ENST00000616153 80 ntBASIC0.09□□□□□ -2.4
VPS35Q96QK1 MIR4315-1-201ENST00000636800 73 ntBASIC0.09□□□□□ -2.4
VPS35Q96QK1 MIR4315-2-201ENST00000640925 73 ntBASIC0.09□□□□□ -2.4
VPS35Q96QK1 Y_RNA.13-201ENST00000362403 112 ntBASIC0.08□□□□□ -2.4
VPS35Q96QK1 RNU6-403P-201ENST00000363163 104 ntBASIC0.08□□□□□ -2.4
VPS35Q96QK1 RNU6-1099P-201ENST00000363533 107 ntBASIC0.08□□□□□ -2.4
VPS35Q96QK1 Y_RNA.199-201ENST00000364014 102 ntBASIC0.08□□□□□ -2.4
VPS35Q96QK1 RNU5E-4P-201ENST00000364931 120 ntBASIC0.08□□□□□ -2.4
VPS35Q96QK1 Y_RNA.430-201ENST00000384081 110 ntBASIC0.08□□□□□ -2.4
VPS35Q96QK1 Y_RNA.454-201ENST00000384224 113 ntBASIC0.08□□□□□ -2.4
VPS35Q96QK1 MIR616-201ENST00000385293 97 ntBASIC0.08□□□□□ -2.4
VPS35Q96QK1 RNU6-1228P-201ENST00000391014 107 ntBASIC0.08□□□□□ -2.4
VPS35Q96QK1 MIR548P-201ENST00000408336 84 ntBASIC0.08□□□□□ -2.4
VPS35Q96QK1 AC112693.2-201ENST00000556538 232 ntBASIC0.08□□□□□ -2.4
VPS35Q96QK1 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.08□□□□□ -2.4
VPS35Q96QK1 MIR3129-201ENST00000581095 76 ntBASIC0.08□□□□□ -2.4
VPS35Q96QK1 AC091932.4-201ENST00000623386 200 ntBASIC0.08□□□□□ -2.4
VPS35Q96QK1 Y_RNA.44-201ENST00000362676 108 ntBASIC0.07□□□□□ -2.4
VPS35Q96QK1 Y_RNA.138-201ENST00000363462 102 ntBASIC0.07□□□□□ -2.4
VPS35Q96QK1 Y_RNA.153-201ENST00000363615 91 ntBASIC0.07□□□□□ -2.4
VPS35Q96QK1 snoU2_19.4-201ENST00000364329 80 ntBASIC0.07□□□□□ -2.4
VPS35Q96QK1 Y_RNA.542-201ENST00000384641 111 ntBASIC0.07□□□□□ -2.4
VPS35Q96QK1 RNU2-59P-201ENST00000410482 191 ntBASIC0.07□□□□□ -2.4
VPS35Q96QK1 RNU6-453P-201ENST00000516819 85 ntBASIC0.07□□□□□ -2.4
VPS35Q96QK1 RNA5SP268-201ENST00000516828 124 ntBASIC0.07□□□□□ -2.4
VPS35Q96QK1 MIR6082-201ENST00000613604 109 ntBASIC0.07□□□□□ -2.4
VPS35Q96QK1 AL596211.1-201ENST00000569873 2277 ntBASIC0.07□□□□□ -2.4
VPS35Q96QK1 Y_RNA.32-201ENST00000362589 110 ntBASIC0.06□□□□□ -2.4
VPS35Q96QK1 U8.15-201ENST00000390947 134 ntBASIC0.06□□□□□ -2.4
VPS35Q96QK1 SNORD2.1-201ENST00000458762 69 ntBASIC0.06□□□□□ -2.4
VPS35Q96QK1 RNU6-570P-201ENST00000517051 105 ntBASIC0.06□□□□□ -2.4
VPS35Q96QK1 AC141846.1-201ENST00000568348 142 ntBASIC0.06□□□□□ -2.4
VPS35Q96QK1 MIR8087-201ENST00000612745 78 ntBASIC0.06□□□□□ -2.4
VPS35Q96QK1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
VPS35Q96QK1 Y_RNA.216-201ENST00000364205 93 ntBASIC0.05□□□□□ -2.4
VPS35Q96QK1 SNORA20-201ENST00000384662 132 ntBASIC0.05□□□□□ -2.4
VPS35Q96QK1 Y_RNA.588-201ENST00000391254 102 ntBASIC0.05□□□□□ -2.4
VPS35Q96QK1 MIR3152-201ENST00000579801 74 ntBASIC0.05□□□□□ -2.4
VPS35Q96QK1 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.05□□□□□ -2.4
VPS35Q96QK1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
VPS35Q96QK1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.04□□□□□ -2.4
VPS35Q96QK1 RNU6-765P-201ENST00000516916 99 ntBASIC0.04□□□□□ -2.4
VPS35Q96QK1 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.04□□□□□ -2.4
VPS35Q96QK1 MIR3171-201ENST00000584270 74 ntBASIC0.04□□□□□ -2.4
VPS35Q96QK1 MIR7107-201ENST00000611489 80 ntBASIC0.04□□□□□ -2.4
VPS35Q96QK1 MIR6841-201ENST00000637129 72 ntBASIC0.04□□□□□ -2.4
VPS35Q96QK1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
VPS35Q96QK1 Y_RNA.82-201ENST00000363000 102 ntBASIC0.03□□□□□ -2.4
VPS35Q96QK1 Y_RNA.92-201ENST00000363043 102 ntBASIC0.03□□□□□ -2.4
VPS35Q96QK1 SNORA42.1-201ENST00000363515 137 ntBASIC0.03□□□□□ -2.4
VPS35Q96QK1 Y_RNA.174-201ENST00000363781 105 ntBASIC0.03□□□□□ -2.4
VPS35Q96QK1 Y_RNA.235-201ENST00000364412 102 ntBASIC0.03□□□□□ -2.4
VPS35Q96QK1 Y_RNA.306-201ENST00000365015 102 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 326.1 ms