Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 SNX2P2-201ENST00000424553 323 ntBASIC0.89□□□□□ -2.27
ZIM3Q96PE6 RNU2-11P-201ENST00000459191 187 ntBASIC0.89□□□□□ -2.27
ZIM3Q96PE6 MIR1270-201ENST00000459320 83 ntBASIC0.89□□□□□ -2.27
ZIM3Q96PE6 RNU7-96P-201ENST00000459535 64 ntBASIC0.89□□□□□ -2.27
ZIM3Q96PE6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.89□□□□□ -2.27
ZIM3Q96PE6 AC048334.1-201ENST00000477975 159 ntBASIC0.89□□□□□ -2.27
ZIM3Q96PE6 RNA5SP404-201ENST00000517118 132 ntBASIC0.89□□□□□ -2.27
ZIM3Q96PE6 AL022345.2-201ENST00000606307 135 ntBASIC0.89□□□□□ -2.27
ZIM3Q96PE6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
ZIM3Q96PE6 MIR8065-201ENST00000620577 100 ntBASIC0.89□□□□□ -2.27
ZIM3Q96PE6 AL391516.1-201ENST00000554380 2449 ntBASIC0.88□□□□□ -2.27
ZIM3Q96PE6 SNORA25.3-201ENST00000363205 127 ntBASIC0.88□□□□□ -2.27
ZIM3Q96PE6 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
ZIM3Q96PE6 Y_RNA.351-201ENST00000365436 96 ntBASIC0.88□□□□□ -2.27
ZIM3Q96PE6 MT-TI-201ENST00000387365 69 ntBASIC0.88□□□□□ -2.27
ZIM3Q96PE6 AC244023.1-201ENST00000426884 112 ntBASIC0.88□□□□□ -2.27
ZIM3Q96PE6 AL035398.1-201ENST00000430869 322 ntBASIC0.88□□□□□ -2.27
ZIM3Q96PE6 UBL5P1-201ENST00000507979 193 ntBASIC0.88□□□□□ -2.27
ZIM3Q96PE6 RNU2-35P-201ENST00000516446 142 ntBASIC0.88□□□□□ -2.27
ZIM3Q96PE6 Y_RNA.690-201ENST00000516603 95 ntBASIC0.88□□□□□ -2.27
ZIM3Q96PE6 RNU6-958P-201ENST00000516995 106 ntBASIC0.88□□□□□ -2.27
ZIM3Q96PE6 AC013244.2-201ENST00000603396 103 ntBASIC0.88□□□□□ -2.27
ZIM3Q96PE6 AC242498.1-201ENST00000604134 111 ntBASIC0.88□□□□□ -2.27
ZIM3Q96PE6 MIR4251-201ENST00000635819 61 ntBASIC0.88□□□□□ -2.27
ZIM3Q96PE6 Z97988.1-201ENST00000637697 135 ntBASIC0.88□□□□□ -2.27
ZIM3Q96PE6 Y_RNA.114-201ENST00000363265 113 ntBASIC0.87□□□□□ -2.27
ZIM3Q96PE6 RNA5SP99-201ENST00000364020 114 ntBASIC0.87□□□□□ -2.27
ZIM3Q96PE6 RNU6-654P-201ENST00000364373 107 ntBASIC0.87□□□□□ -2.27
ZIM3Q96PE6 RNU4-16P-201ENST00000364737 141 ntBASIC0.87□□□□□ -2.27
ZIM3Q96PE6 SNORA1.2-201ENST00000365189 134 ntBASIC0.87□□□□□ -2.27
ZIM3Q96PE6 Y_RNA.366-201ENST00000365540 102 ntBASIC0.87□□□□□ -2.27
ZIM3Q96PE6 SNORA51.10-201ENST00000384418 136 ntBASIC0.87□□□□□ -2.27
ZIM3Q96PE6 MIR532-201ENST00000385025 91 ntBASIC0.87□□□□□ -2.27
ZIM3Q96PE6 MIR146A-201ENST00000385201 99 ntBASIC0.87□□□□□ -2.27
ZIM3Q96PE6 AC245047.7-201ENST00000440265 293 ntBASIC0.87□□□□□ -2.27
ZIM3Q96PE6 RNU7-107P-201ENST00000459121 61 ntBASIC0.87□□□□□ -2.27
ZIM3Q96PE6 RNU6-322P-201ENST00000516010 103 ntBASIC0.87□□□□□ -2.27
ZIM3Q96PE6 RNU6-781P-201ENST00000516377 101 ntBASIC0.87□□□□□ -2.27
ZIM3Q96PE6 RNU6-1234P-201ENST00000516877 103 ntBASIC0.87□□□□□ -2.27
ZIM3Q96PE6 AP001328.1-201ENST00000528550 176 ntBASIC0.87□□□□□ -2.27
ZIM3Q96PE6 U7.2-201ENST00000607576 63 ntBASIC0.87□□□□□ -2.27
ZIM3Q96PE6 uc_338.6-201ENST00000613544 171 ntBASIC0.87□□□□□ -2.27
ZIM3Q96PE6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
ZIM3Q96PE6 MIR378A-201ENST00000362177 66 ntBASIC0.86□□□□□ -2.27
ZIM3Q96PE6 Y_RNA.343-201ENST00000365354 112 ntBASIC0.86□□□□□ -2.27
ZIM3Q96PE6 RNY1P6-201ENST00000384193 109 ntBASIC0.86□□□□□ -2.27
ZIM3Q96PE6 RNU6-959P-201ENST00000384671 107 ntBASIC0.86□□□□□ -2.27
ZIM3Q96PE6 SNORA40-201ENST00000388090 126 ntBASIC0.86□□□□□ -2.27
ZIM3Q96PE6 SNORA75.2-201ENST00000391138 150 ntBASIC0.86□□□□□ -2.27
ZIM3Q96PE6 SNORA75.3-201ENST00000391231 150 ntBASIC0.86□□□□□ -2.27
ZIM3Q96PE6 RNA5SP144-201ENST00000410846 116 ntBASIC0.86□□□□□ -2.27
ZIM3Q96PE6 RNU6-602P-201ENST00000411155 105 ntBASIC0.86□□□□□ -2.27
ZIM3Q96PE6 RNU4-61P-201ENST00000411243 107 ntBASIC0.86□□□□□ -2.27
ZIM3Q96PE6 Y_RNA.630-201ENST00000411370 108 ntBASIC0.86□□□□□ -2.27
ZIM3Q96PE6 AL158147.1-201ENST00000443970 75 ntBASIC0.86□□□□□ -2.27
ZIM3Q96PE6 RNU6-351P-201ENST00000516097 100 ntBASIC0.86□□□□□ -2.27
ZIM3Q96PE6 RNU6-240P-201ENST00000516098 97 ntBASIC0.86□□□□□ -2.27
ZIM3Q96PE6 FAM71BP1-201ENST00000604431 523 ntBASIC0.86□□□□□ -2.27
ZIM3Q96PE6 MIR6857-201ENST00000613267 93 ntBASIC0.86□□□□□ -2.27
ZIM3Q96PE6 MIR6717-201ENST00000622747 73 ntBASIC0.86□□□□□ -2.27
ZIM3Q96PE6 AC021613.1-201ENST00000623880 111 ntBASIC0.86□□□□□ -2.27
ZIM3Q96PE6 MIR6516-201ENST00000630554 81 ntBASIC0.86□□□□□ -2.27
ZIM3Q96PE6 AL596211.1-201ENST00000569873 2277 ntBASIC0.86□□□□□ -2.27
ZIM3Q96PE6 MIR342-201ENST00000362212 99 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 RNU6-235P-201ENST00000362644 107 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 Y_RNA.71-201ENST00000362892 104 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 RNA5SP264-201ENST00000363115 107 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 RNA5SP48-201ENST00000363969 126 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 RNU6-53P-201ENST00000365367 106 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 Y_RNA.430-201ENST00000384081 110 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 RNU6-1104P-201ENST00000384723 104 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 RNU6-1319P-201ENST00000390855 104 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 RNU6-747P-201ENST00000390928 104 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 RNU6-241P-201ENST00000391148 104 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 RNU6-177P-201ENST00000411257 104 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.85□□□□□ -2.27
ZIM3Q96PE6 TMSB4XP3-201ENST00000445144 114 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 snoU13.16-201ENST00000459350 104 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 RPS23P4-201ENST00000487908 423 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 SNORA31.2-201ENST00000516019 134 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 RNU6-659P-201ENST00000516454 104 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 Y_RNA.757-201ENST00000578934 114 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 AL357312.1-201ENST00000603879 298 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.85□□□□□ -2.27
ZIM3Q96PE6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
ZIM3Q96PE6 Y_RNA.171-201ENST00000363760 102 ntBASIC0.84□□□□□ -2.27
ZIM3Q96PE6 RNU1-133P-201ENST00000364867 167 ntBASIC0.84□□□□□ -2.27
ZIM3Q96PE6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.84□□□□□ -2.27
ZIM3Q96PE6 RNA5SP95-201ENST00000410319 137 ntBASIC0.84□□□□□ -2.27
ZIM3Q96PE6 RNU6-735P-201ENST00000410612 107 ntBASIC0.84□□□□□ -2.27
ZIM3Q96PE6 AL512326.2-201ENST00000426359 151 ntBASIC0.84□□□□□ -2.27
ZIM3Q96PE6 RNU7-67P-201ENST00000459003 62 ntBASIC0.84□□□□□ -2.27
ZIM3Q96PE6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.84□□□□□ -2.27
ZIM3Q96PE6 RNU7-123P-201ENST00000515911 60 ntBASIC0.84□□□□□ -2.27
ZIM3Q96PE6 RN7SKP88-201ENST00000516847 250 ntBASIC0.84□□□□□ -2.27
ZIM3Q96PE6 AC022523.2-201ENST00000561045 150 ntBASIC0.84□□□□□ -2.27
ZIM3Q96PE6 AC011603.4-201ENST00000611325 277 ntBASIC0.84□□□□□ -2.27
ZIM3Q96PE6 7SK.8-201ENST00000612110 250 ntBASIC0.84□□□□□ -2.27
ZIM3Q96PE6 7SK.11-201ENST00000615477 250 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 303.1 ms