Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 AL359821.1-201ENST00000605519 182 ntBASIC1.65□□□□□ -2.15
ACAP3Q96P50 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
ACAP3Q96P50 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.64□□□□□ -2.15
ACAP3Q96P50 AL157777.2-201ENST00000258070 137 ntBASIC1.64□□□□□ -2.15
ACAP3Q96P50 Y_RNA.218-201ENST00000364218 104 ntBASIC1.64□□□□□ -2.15
ACAP3Q96P50 RNA5SP261-201ENST00000410536 106 ntBASIC1.64□□□□□ -2.15
ACAP3Q96P50 RNU1-98P-201ENST00000458992 160 ntBASIC1.64□□□□□ -2.15
ACAP3Q96P50 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.64□□□□□ -2.15
ACAP3Q96P50 TRMT112P2-201ENST00000512910 132 ntBASIC1.64□□□□□ -2.15
ACAP3Q96P50 AC021443.1-201ENST00000604478 211 ntBASIC1.64□□□□□ -2.15
ACAP3Q96P50 AL512598.1-201ENST00000610158 273 ntBASIC1.64□□□□□ -2.15
ACAP3Q96P50 AL137067.1-201ENST00000615933 120 ntBASIC1.64□□□□□ -2.15
ACAP3Q96P50 MIR6717-201ENST00000622747 73 ntBASIC1.64□□□□□ -2.15
ACAP3Q96P50 MIR103A2-201ENST00000362154 78 ntBASIC1.63□□□□□ -2.15
ACAP3Q96P50 Y_RNA.71-201ENST00000362892 104 ntBASIC1.63□□□□□ -2.15
ACAP3Q96P50 MIR1304-201ENST00000408243 91 ntBASIC1.63□□□□□ -2.15
ACAP3Q96P50 AL606753.1-201ENST00000427435 87 ntBASIC1.63□□□□□ -2.15
ACAP3Q96P50 RNU6-1061P-201ENST00000516530 99 ntBASIC1.63□□□□□ -2.15
ACAP3Q96P50 SNORA31.24-201ENST00000517232 57 ntBASIC1.63□□□□□ -2.15
ACAP3Q96P50 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.63□□□□□ -2.15
ACAP3Q96P50 Y_RNA.280-201ENST00000364765 112 ntBASIC1.62□□□□□ -2.15
ACAP3Q96P50 RNU6-1319P-201ENST00000390855 104 ntBASIC1.62□□□□□ -2.15
ACAP3Q96P50 RNU6-747P-201ENST00000390928 104 ntBASIC1.62□□□□□ -2.15
ACAP3Q96P50 RNU6-241P-201ENST00000391148 104 ntBASIC1.62□□□□□ -2.15
ACAP3Q96P50 SNORA26.6-201ENST00000391256 115 ntBASIC1.62□□□□□ -2.15
ACAP3Q96P50 RNU6-177P-201ENST00000411257 104 ntBASIC1.62□□□□□ -2.15
ACAP3Q96P50 AC245047.7-201ENST00000440265 293 ntBASIC1.62□□□□□ -2.15
ACAP3Q96P50 AC048334.1-201ENST00000477975 159 ntBASIC1.62□□□□□ -2.15
ACAP3Q96P50 AC023790.1-201ENST00000482174 347 ntBASIC1.62□□□□□ -2.15
ACAP3Q96P50 MIR8055-201ENST00000610739 97 ntBASIC1.62□□□□□ -2.15
ACAP3Q96P50 RNA5SP264-201ENST00000363115 107 ntBASIC1.61□□□□□ -2.15
ACAP3Q96P50 RNU6-80P-201ENST00000384195 107 ntBASIC1.61□□□□□ -2.15
ACAP3Q96P50 RPS3AP1-201ENST00000413190 320 ntBASIC1.61□□□□□ -2.15
ACAP3Q96P50 AC090844.1-201ENST00000422019 156 ntBASIC1.61□□□□□ -2.15
ACAP3Q96P50 RNU7-107P-201ENST00000459121 61 ntBASIC1.61□□□□□ -2.15
ACAP3Q96P50 RN7SKP19-201ENST00000516016 252 ntBASIC1.61□□□□□ -2.15
ACAP3Q96P50 SNORA31.2-201ENST00000516019 134 ntBASIC1.61□□□□□ -2.15
ACAP3Q96P50 IGKV1-22-201ENST00000524313 326 ntBASIC1.61□□□□□ -2.15
ACAP3Q96P50 MIR4305-201ENST00000583252 102 ntBASIC1.61□□□□□ -2.15
ACAP3Q96P50 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.61□□□□□ -2.15
ACAP3Q96P50 RNU6-1117P-201ENST00000384525 104 ntBASIC1.6□□□□□ -2.15
ACAP3Q96P50 MIR1263-201ENST00000408324 86 ntBASIC1.6□□□□□ -2.15
ACAP3Q96P50 MIR1287-201ENST00000408492 90 ntBASIC1.6□□□□□ -2.15
ACAP3Q96P50 AL022718.1-201ENST00000412004 84 ntBASIC1.6□□□□□ -2.15
ACAP3Q96P50 AL354695.1-201ENST00000427935 228 ntBASIC1.6□□□□□ -2.15
ACAP3Q96P50 RNU7-164P-201ENST00000459221 62 ntBASIC1.6□□□□□ -2.15
ACAP3Q96P50 MIR8070-201ENST00000616510 88 ntBASIC1.6□□□□□ -2.15
ACAP3Q96P50 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.6□□□□□ -2.15
ACAP3Q96P50 MIR8065-201ENST00000620577 100 ntBASIC1.6□□□□□ -2.15
ACAP3Q96P50 Z97988.1-201ENST00000637697 135 ntBASIC1.6□□□□□ -2.15
ACAP3Q96P50 MIR337-201ENST00000362281 93 ntBASIC1.59□□□□□ -2.15
ACAP3Q96P50 SNORA22.1-201ENST00000362701 134 ntBASIC1.59□□□□□ -2.15
ACAP3Q96P50 Y_RNA.525-201ENST00000384570 113 ntBASIC1.59□□□□□ -2.15
ACAP3Q96P50 MIR1302-7-201ENST00000408841 72 ntBASIC1.59□□□□□ -2.15
ACAP3Q96P50 RNA5SP144-201ENST00000410846 116 ntBASIC1.59□□□□□ -2.15
ACAP3Q96P50 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.59□□□□□ -2.15
ACAP3Q96P50 RNU6-772P-201ENST00000516042 105 ntBASIC1.59□□□□□ -2.15
ACAP3Q96P50 RNU6-781P-201ENST00000516377 101 ntBASIC1.59□□□□□ -2.15
ACAP3Q96P50 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.59□□□□□ -2.15
ACAP3Q96P50 U2.22-201ENST00000636441 106 ntBASIC1.59□□□□□ -2.15
ACAP3Q96P50 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
ACAP3Q96P50 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.16
ACAP3Q96P50 ZNF209P-201ENST00000593450 2304 ntBASIC1.58□□□□□ -2.16
ACAP3Q96P50 SNORD116-14-201ENST00000383894 92 ntBASIC1.58□□□□□ -2.16
ACAP3Q96P50 SNORD116-17-201ENST00000383929 92 ntBASIC1.58□□□□□ -2.16
ACAP3Q96P50 SNORD116-15-201ENST00000384445 92 ntBASIC1.58□□□□□ -2.16
ACAP3Q96P50 SNORD38B-201ENST00000384690 67 ntBASIC1.58□□□□□ -2.16
ACAP3Q96P50 SNORD116-19-201ENST00000384729 92 ntBASIC1.58□□□□□ -2.16
ACAP3Q96P50 MIR1185-1-201ENST00000408598 86 ntBASIC1.58□□□□□ -2.16
ACAP3Q96P50 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.58□□□□□ -2.16
ACAP3Q96P50 RNU6-1333P-201ENST00000516162 93 ntBASIC1.58□□□□□ -2.16
ACAP3Q96P50 RNY4P20-201ENST00000516678 93 ntBASIC1.58□□□□□ -2.16
ACAP3Q96P50 PRELID3BP2-201ENST00000605362 201 ntBASIC1.58□□□□□ -2.16
ACAP3Q96P50 AL365222.1-201ENST00000614661 98 ntBASIC1.58□□□□□ -2.16
ACAP3Q96P50 SNORD38B-202ENST00000625943 69 ntBASIC1.58□□□□□ -2.16
ACAP3Q96P50 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.58□□□□□ -2.16
ACAP3Q96P50 RNY1P10-201ENST00000363268 113 ntBASIC1.57□□□□□ -2.16
ACAP3Q96P50 Y_RNA.127-201ENST00000363386 109 ntBASIC1.57□□□□□ -2.16
ACAP3Q96P50 Y_RNA.298-201ENST00000364960 107 ntBASIC1.57□□□□□ -2.16
ACAP3Q96P50 RNU6-396P-201ENST00000365369 105 ntBASIC1.57□□□□□ -2.16
ACAP3Q96P50 RNU6-602P-201ENST00000411155 105 ntBASIC1.57□□□□□ -2.16
ACAP3Q96P50 RNU6-1054P-201ENST00000411293 104 ntBASIC1.57□□□□□ -2.16
ACAP3Q96P50 POLR2J4-204ENST00000418424 324 ntBASIC1.57□□□□□ -2.16
ACAP3Q96P50 AC008267.6-201ENST00000441664 139 ntBASIC1.57□□□□□ -2.16
ACAP3Q96P50 RNU6-893P-201ENST00000458841 100 ntBASIC1.57□□□□□ -2.16
ACAP3Q96P50 RNU7-123P-201ENST00000515911 60 ntBASIC1.57□□□□□ -2.16
ACAP3Q96P50 RNU2-35P-201ENST00000516446 142 ntBASIC1.57□□□□□ -2.16
ACAP3Q96P50 RNU6-62P-201ENST00000516526 102 ntBASIC1.57□□□□□ -2.16
ACAP3Q96P50 AP003716.2-201ENST00000528260 108 ntBASIC1.57□□□□□ -2.16
ACAP3Q96P50 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
ACAP3Q96P50 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
ACAP3Q96P50 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
ACAP3Q96P50 Y_RNA.171-201ENST00000363760 102 ntBASIC1.56□□□□□ -2.16
ACAP3Q96P50 Y_RNA.261-201ENST00000364631 102 ntBASIC1.56□□□□□ -2.16
ACAP3Q96P50 SNORD58C-201ENST00000365223 64 ntBASIC1.56□□□□□ -2.16
ACAP3Q96P50 MIR320A-201ENST00000385302 82 ntBASIC1.56□□□□□ -2.16
ACAP3Q96P50 Y_RNA.617-201ENST00000410920 90 ntBASIC1.56□□□□□ -2.16
ACAP3Q96P50 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.56□□□□□ -2.16
ACAP3Q96P50 RNU1-92P-201ENST00000517017 135 ntBASIC1.56□□□□□ -2.16
ACAP3Q96P50 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms