Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.17□□□□□ -2.44
USP47Q96K76 RNU4-10P-201ENST00000364383 140 ntBASIC-0.17□□□□□ -2.44
USP47Q96K76 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.17□□□□□ -2.44
USP47Q96K76 MIR593-201ENST00000384856 100 ntBASIC-0.17□□□□□ -2.44
USP47Q96K76 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.17□□□□□ -2.44
USP47Q96K76 RNU6-507P-201ENST00000516045 100 ntBASIC-0.17□□□□□ -2.44
USP47Q96K76 AL662814.1-201ENST00000617364 121 ntBASIC-0.17□□□□□ -2.44
USP47Q96K76 MIR6828-201ENST00000636181 60 ntBASIC-0.17□□□□□ -2.44
USP47Q96K76 AC112487.2-201ENST00000637950 304 ntBASIC-0.17□□□□□ -2.44
USP47Q96K76 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.18□□□□□ -2.44
USP47Q96K76 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.18□□□□□ -2.44
USP47Q96K76 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.18□□□□□ -2.44
USP47Q96K76 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.18□□□□□ -2.44
USP47Q96K76 RNU6-127P-201ENST00000390897 107 ntBASIC-0.18□□□□□ -2.44
USP47Q96K76 SNORD115-46-201ENST00000390982 71 ntBASIC-0.18□□□□□ -2.44
USP47Q96K76 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.18□□□□□ -2.44
USP47Q96K76 MIR4491-201ENST00000581087 68 ntBASIC-0.18□□□□□ -2.44
USP47Q96K76 AC091304.10-201ENST00000641554 121 ntBASIC-0.18□□□□□ -2.44
USP47Q96K76 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 RNU6-597P-201ENST00000365620 102 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 MIR145-201ENST00000384967 88 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 MIR760-201ENST00000390220 80 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 MIR1302-11-201ENST00000408051 138 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 MIR1302-9-201ENST00000408365 138 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 MIR1302-10-201ENST00000408734 138 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 RNA5SP261-201ENST00000410536 106 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 HMGN2P22-201ENST00000427588 175 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 RNA5SP47-201ENST00000517230 109 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 AP003733.2-201ENST00000529409 171 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 MIR1302-2-201ENST00000607096 138 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 AC007485.1-201ENST00000616755 206 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 AC139792.2-201ENST00000624218 587 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 MIR409-201ENST00000362237 79 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 SNORA32.1-201ENST00000364514 115 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 RNU6-662P-201ENST00000384253 104 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 MIR526A2-201ENST00000390198 65 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 SNORA26-201ENST00000391286 122 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 AC006006.1-201ENST00000603082 144 ntBASIC-0.19□□□□□ -2.44
USP47Q96K76 RNU6-653P-201ENST00000363074 106 ntBASIC-0.2□□□□□ -2.44
USP47Q96K76 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.2□□□□□ -2.44
USP47Q96K76 RNU6-514P-201ENST00000384208 107 ntBASIC-0.2□□□□□ -2.44
USP47Q96K76 SNORA72.6-201ENST00000384520 129 ntBASIC-0.2□□□□□ -2.44
USP47Q96K76 SNORD28-201ENST00000384706 75 ntBASIC-0.2□□□□□ -2.44
USP47Q96K76 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.2□□□□□ -2.44
USP47Q96K76 RNU6-848P-201ENST00000515948 107 ntBASIC-0.2□□□□□ -2.44
USP47Q96K76 RNU6-475P-201ENST00000516073 104 ntBASIC-0.2□□□□□ -2.44
USP47Q96K76 RNU6-617P-201ENST00000516147 107 ntBASIC-0.2□□□□□ -2.44
USP47Q96K76 RNU6-473P-201ENST00000516164 107 ntBASIC-0.2□□□□□ -2.44
USP47Q96K76 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.2□□□□□ -2.44
USP47Q96K76 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.2□□□□□ -2.44
USP47Q96K76 RNU6-135P-201ENST00000516769 101 ntBASIC-0.2□□□□□ -2.44
USP47Q96K76 AL133255.1-201ENST00000606374 441 ntBASIC-0.2□□□□□ -2.44
USP47Q96K76 snoU18.1-201ENST00000629629 71 ntBASIC-0.2□□□□□ -2.44
USP47Q96K76 MIR499B-201ENST00000636498 73 ntBASIC-0.2□□□□□ -2.44
USP47Q96K76 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.21□□□□□ -2.44
USP47Q96K76 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.21□□□□□ -2.44
USP47Q96K76 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.21□□□□□ -2.44
USP47Q96K76 RNU6-765P-201ENST00000516916 99 ntBASIC-0.21□□□□□ -2.44
USP47Q96K76 RNU6-897P-201ENST00000517135 105 ntBASIC-0.21□□□□□ -2.44
USP47Q96K76 MIR3152-201ENST00000579801 74 ntBASIC-0.21□□□□□ -2.44
USP47Q96K76 MIR5688-201ENST00000580619 83 ntBASIC-0.21□□□□□ -2.44
USP47Q96K76 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.22□□□□□ -2.45
USP47Q96K76 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.22□□□□□ -2.45
USP47Q96K76 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.22□□□□□ -2.45
USP47Q96K76 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.22□□□□□ -2.45
USP47Q96K76 RNA5SP128-201ENST00000365305 116 ntBASIC-0.22□□□□□ -2.45
USP47Q96K76 RNU6-535P-201ENST00000384722 107 ntBASIC-0.22□□□□□ -2.45
USP47Q96K76 FGF7P4-201ENST00000509595 295 ntBASIC-0.22□□□□□ -2.45
USP47Q96K76 AC141846.1-201ENST00000568348 142 ntBASIC-0.22□□□□□ -2.45
USP47Q96K76 MTND5P34-201ENST00000568888 325 ntBASIC-0.22□□□□□ -2.45
USP47Q96K76 AC244669.1-204ENST00000621564 178 ntBASIC-0.22□□□□□ -2.45
USP47Q96K76 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.23□□□□□ -2.45
USP47Q96K76 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.23□□□□□ -2.45
USP47Q96K76 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.23□□□□□ -2.45
USP47Q96K76 RNU6-291P-201ENST00000384720 107 ntBASIC-0.23□□□□□ -2.45
USP47Q96K76 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.23□□□□□ -2.45
USP47Q96K76 RPL39P34-201ENST00000477141 156 ntBASIC-0.23□□□□□ -2.45
USP47Q96K76 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.23□□□□□ -2.45
USP47Q96K76 MIR4639-201ENST00000584938 69 ntBASIC-0.23□□□□□ -2.45
USP47Q96K76 AL008718.3-201ENST00000610217 321 ntBASIC-0.23□□□□□ -2.45
USP47Q96K76 AC090574.1-201ENST00000623186 233 ntBASIC-0.23□□□□□ -2.45
USP47Q96K76 SNORA25.1-201ENST00000362326 128 ntBASIC-0.24□□□□□ -2.45
USP47Q96K76 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.24□□□□□ -2.45
USP47Q96K76 SNORD114-28-201ENST00000363610 72 ntBASIC-0.24□□□□□ -2.45
USP47Q96K76 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.24□□□□□ -2.45
USP47Q96K76 RNY3P1-201ENST00000365085 102 ntBASIC-0.24□□□□□ -2.45
USP47Q96K76 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.24□□□□□ -2.45
USP47Q96K76 MIR215-201ENST00000384858 110 ntBASIC-0.24□□□□□ -2.45
USP47Q96K76 RNU2-55P-201ENST00000411146 174 ntBASIC-0.24□□□□□ -2.45
USP47Q96K76 RNU7-80P-201ENST00000459562 61 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 394.1 ms