Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CHFRQ96EP1 SNORD115-3-201ENST00000363100 82 ntBASIC2.07□□□□□ -2.08
CHFRQ96EP1 Y_RNA.470-201ENST00000384307 117 ntBASIC2.07□□□□□ -2.08
CHFRQ96EP1 MIR518A2-201ENST00000384966 87 ntBASIC2.07□□□□□ -2.08
CHFRQ96EP1 SNORA40.18-201ENST00000391200 128 ntBASIC2.07□□□□□ -2.08
CHFRQ96EP1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.07□□□□□ -2.08
CHFRQ96EP1 AL035398.1-201ENST00000430869 322 ntBASIC2.07□□□□□ -2.08
CHFRQ96EP1 RNU7-94P-201ENST00000459576 63 ntBASIC2.07□□□□□ -2.08
CHFRQ96EP1 Y_RNA.705-201ENST00000516862 110 ntBASIC2.07□□□□□ -2.08
CHFRQ96EP1 RNU6-667P-201ENST00000517186 102 ntBASIC2.07□□□□□ -2.08
CHFRQ96EP1 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.07□□□□□ -2.08
CHFRQ96EP1 AC019288.1-201ENST00000557918 224 ntBASIC2.07□□□□□ -2.08
CHFRQ96EP1 Y_RNA.4-201ENST00000362333 112 ntBASIC2.06□□□□□ -2.08
CHFRQ96EP1 RNU6-862P-201ENST00000362804 105 ntBASIC2.06□□□□□ -2.08
CHFRQ96EP1 Y_RNA.140-201ENST00000363474 103 ntBASIC2.06□□□□□ -2.08
CHFRQ96EP1 Y_RNA.191-201ENST00000363972 113 ntBASIC2.06□□□□□ -2.08
CHFRQ96EP1 RNU6-776P-201ENST00000364403 104 ntBASIC2.06□□□□□ -2.08
CHFRQ96EP1 Y_RNA.241-201ENST00000364470 117 ntBASIC2.06□□□□□ -2.08
CHFRQ96EP1 RNU6-1022P-201ENST00000365049 104 ntBASIC2.06□□□□□ -2.08
CHFRQ96EP1 RNU4-52P-201ENST00000384209 138 ntBASIC2.06□□□□□ -2.08
CHFRQ96EP1 SNORD38C-201ENST00000384381 69 ntBASIC2.06□□□□□ -2.08
CHFRQ96EP1 RNY1P4-201ENST00000384595 115 ntBASIC2.06□□□□□ -2.08
CHFRQ96EP1 MIR583-201ENST00000384846 75 ntBASIC2.06□□□□□ -2.08
CHFRQ96EP1 MIR29C-201ENST00000385231 88 ntBASIC2.06□□□□□ -2.08
CHFRQ96EP1 SNORA17.3-201ENST00000391159 129 ntBASIC2.06□□□□□ -2.08
CHFRQ96EP1 RNA5SP450-201ENST00000411206 102 ntBASIC2.06□□□□□ -2.08
CHFRQ96EP1 SRIP3-201ENST00000413200 219 ntBASIC2.06□□□□□ -2.08
CHFRQ96EP1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.06□□□□□ -2.08
CHFRQ96EP1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.06□□□□□ -2.08
CHFRQ96EP1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.06□□□□□ -2.08
CHFRQ96EP1 ATP5J2P3-201ENST00000451550 258 ntBASIC2.06□□□□□ -2.08
CHFRQ96EP1 AC114811.1-201ENST00000507207 168 ntBASIC2.06□□□□□ -2.08
CHFRQ96EP1 Y_RNA.659-201ENST00000515994 113 ntBASIC2.06□□□□□ -2.08
CHFRQ96EP1 RNU6-1018P-201ENST00000516577 106 ntBASIC2.06□□□□□ -2.08
CHFRQ96EP1 AC024995.1-201ENST00000523014 93 ntBASIC2.06□□□□□ -2.08
CHFRQ96EP1 MIRLET7C-201ENST00000362160 84 ntBASIC2.05□□□□□ -2.08
CHFRQ96EP1 SNORD115-2-201ENST00000362842 82 ntBASIC2.05□□□□□ -2.08
CHFRQ96EP1 SNORD115-20-201ENST00000365099 82 ntBASIC2.05□□□□□ -2.08
CHFRQ96EP1 SNORD58A-201ENST00000383875 65 ntBASIC2.05□□□□□ -2.08
CHFRQ96EP1 Y_RNA.426-201ENST00000384068 113 ntBASIC2.05□□□□□ -2.08
CHFRQ96EP1 RNA5SP482-201ENST00000391269 118 ntBASIC2.05□□□□□ -2.08
CHFRQ96EP1 AC019129.1-201ENST00000403786 261 ntBASIC2.05□□□□□ -2.08
CHFRQ96EP1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.05□□□□□ -2.08
CHFRQ96EP1 RNU7-96P-201ENST00000459535 64 ntBASIC2.05□□□□□ -2.08
CHFRQ96EP1 AC090821.2-201ENST00000523552 176 ntBASIC2.05□□□□□ -2.08
CHFRQ96EP1 MIR5089-201ENST00000580047 84 ntBASIC2.05□□□□□ -2.08
CHFRQ96EP1 MIR548AE2-201ENST00000583456 67 ntBASIC2.05□□□□□ -2.08
CHFRQ96EP1 MIR4448-201ENST00000584360 86 ntBASIC2.05□□□□□ -2.08
CHFRQ96EP1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CHFRQ96EP1 Y_RNA.247-201ENST00000364500 92 ntBASIC2.04□□□□□ -2.08
CHFRQ96EP1 Y_RNA.299-201ENST00000364973 94 ntBASIC2.04□□□□□ -2.08
CHFRQ96EP1 RNU6-652P-201ENST00000365488 107 ntBASIC2.04□□□□□ -2.08
CHFRQ96EP1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.04□□□□□ -2.08
CHFRQ96EP1 U8.15-201ENST00000390947 134 ntBASIC2.04□□□□□ -2.08
CHFRQ96EP1 Y_RNA.611-201ENST00000410682 108 ntBASIC2.04□□□□□ -2.08
CHFRQ96EP1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.04□□□□□ -2.08
CHFRQ96EP1 CST2P1-201ENST00000425770 87 ntBASIC2.04□□□□□ -2.08
CHFRQ96EP1 RNU7-113P-201ENST00000459273 62 ntBASIC2.04□□□□□ -2.08
CHFRQ96EP1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CHFRQ96EP1 RNU7-181P-201ENST00000517234 74 ntBASIC2.04□□□□□ -2.08
CHFRQ96EP1 AP000942.3-201ENST00000603702 160 ntBASIC2.04□□□□□ -2.08
CHFRQ96EP1 AL773524.1-201ENST00000614065 229 ntBASIC2.04□□□□□ -2.08
CHFRQ96EP1 MIR548BB-201ENST00000626714 66 ntBASIC2.04□□□□□ -2.08
CHFRQ96EP1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CHFRQ96EP1 SNORD115-34-201ENST00000362441 82 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 SNORD115-12-201ENST00000362583 82 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 RNU6-1313P-201ENST00000362622 102 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 SNORD115-29-201ENST00000362834 82 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 SNORD115-9-201ENST00000362912 82 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 SNORD115-21-201ENST00000362963 81 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 Y_RNA.94-201ENST00000363068 106 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 SNORD115-14-201ENST00000363090 81 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 Y_RNA.96-201ENST00000363092 109 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 Y_RNA.99-201ENST00000363138 105 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 SNORD115-41-201ENST00000363608 82 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 SNORD115-11-201ENST00000363616 82 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 SNORD115-5-201ENST00000363633 82 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 SNORD115-39-201ENST00000363694 82 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 SNORD115-4-201ENST00000363810 82 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 SNORD115-6-201ENST00000363942 82 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 SNORD115-42-201ENST00000364273 82 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 SNORD115-15-201ENST00000364809 81 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 SNORD115-26-201ENST00000365067 82 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 SNORD115-10-201ENST00000365073 81 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 SNORD115-43-201ENST00000365503 82 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 SNORD115-36-201ENST00000365629 82 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 MIR515-2-201ENST00000384883 83 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 MIR515-1-201ENST00000384884 83 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 RNU6-1319P-201ENST00000390855 104 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 RNU6-747P-201ENST00000390928 104 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 RNA5SP109-201ENST00000391010 116 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 RNU6-241P-201ENST00000391148 104 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 MIR1262-201ENST00000408276 93 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 RNU6-177P-201ENST00000411257 104 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 AC244636.1-201ENST00000421152 228 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 AC245047.3-201ENST00000429428 127 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 AC003989.2-201ENST00000440224 169 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 MIR376B-201ENST00000614515 100 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 MIR6841-201ENST00000637129 72 ntBASIC2.03□□□□□ -2.08
CHFRQ96EP1 MIR4662A-201ENST00000637499 67 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms