Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RNU6-12P-201ENST00000384604 107 ntBASIC2.08□□□□□ -2.08
BRF1Q92994 RNU6-41P-201ENST00000384741 107 ntBASIC2.08□□□□□ -2.08
BRF1Q92994 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
BRF1Q92994 AL451046.2-201ENST00000403074 277 ntBASIC2.08□□□□□ -2.08
BRF1Q92994 RNU4-69P-201ENST00000410677 143 ntBASIC2.08□□□□□ -2.08
BRF1Q92994 AC015688.6-201ENST00000577737 104 ntBASIC2.08□□□□□ -2.08
BRF1Q92994 AL162726.3-218ENST00000636401 95 ntBASIC2.08□□□□□ -2.08
BRF1Q92994 MIR583-201ENST00000384846 75 ntBASIC2.07□□□□□ -2.08
BRF1Q92994 U8.13-201ENST00000390842 128 ntBASIC2.07□□□□□ -2.08
BRF1Q92994 RNA5SP89-201ENST00000410300 108 ntBASIC2.07□□□□□ -2.08
BRF1Q92994 RPS3AP1-201ENST00000413190 320 ntBASIC2.07□□□□□ -2.08
BRF1Q92994 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
BRF1Q92994 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.07□□□□□ -2.08
BRF1Q92994 Z97988.1-201ENST00000637697 135 ntBASIC2.07□□□□□ -2.08
BRF1Q92994 AL359851.1-201ENST00000569460 4997 ntBASIC2.07□□□□□ -2.08
BRF1Q92994 RNU6-1298P-201ENST00000362456 101 ntBASIC2.06□□□□□ -2.08
BRF1Q92994 Y_RNA.328-201ENST00000365208 113 ntBASIC2.06□□□□□ -2.08
BRF1Q92994 Y_RNA.495-201ENST00000384435 112 ntBASIC2.06□□□□□ -2.08
BRF1Q92994 MIR1912-201ENST00000410389 80 ntBASIC2.06□□□□□ -2.08
BRF1Q92994 AL356379.1-201ENST00000414105 126 ntBASIC2.06□□□□□ -2.08
BRF1Q92994 RNA5SP233-201ENST00000459153 113 ntBASIC2.06□□□□□ -2.08
BRF1Q92994 RN7SL429P-201ENST00000479090 223 ntBASIC2.06□□□□□ -2.08
BRF1Q92994 RN7SL489P-201ENST00000486185 223 ntBASIC2.06□□□□□ -2.08
BRF1Q92994 RN7SL327P-201ENST00000488659 223 ntBASIC2.06□□□□□ -2.08
BRF1Q92994 RN7SL853P-201ENST00000617250 223 ntBASIC2.06□□□□□ -2.08
BRF1Q92994 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
BRF1Q92994 SNORA1.1-201ENST00000364671 133 ntBASIC2.05□□□□□ -2.08
BRF1Q92994 Y_RNA.470-201ENST00000384307 117 ntBASIC2.05□□□□□ -2.08
BRF1Q92994 RNU6-1113P-201ENST00000384348 107 ntBASIC2.05□□□□□ -2.08
BRF1Q92994 SNORD41-201ENST00000386967 70 ntBASIC2.05□□□□□ -2.08
BRF1Q92994 RNU6-250P-201ENST00000516958 103 ntBASIC2.05□□□□□ -2.08
BRF1Q92994 AC103810.8-201ENST00000607347 118 ntBASIC2.05□□□□□ -2.08
BRF1Q92994 MIR6845-201ENST00000613182 61 ntBASIC2.05□□□□□ -2.08
BRF1Q92994 AC084768.2-201ENST00000622736 221 ntBASIC2.05□□□□□ -2.08
BRF1Q92994 Y_RNA.78-201ENST00000362970 110 ntBASIC2.04□□□□□ -2.08
BRF1Q92994 Y_RNA.354-201ENST00000365448 111 ntBASIC2.04□□□□□ -2.08
BRF1Q92994 RNU6-756P-201ENST00000383997 107 ntBASIC2.04□□□□□ -2.08
BRF1Q92994 HMGN1P33-201ENST00000432945 451 ntBASIC2.04□□□□□ -2.08
BRF1Q92994 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.04□□□□□ -2.08
BRF1Q92994 RNA5SP33-201ENST00000516687 98 ntBASIC2.04□□□□□ -2.08
BRF1Q92994 SNORA44.1-201ENST00000517031 108 ntBASIC2.04□□□□□ -2.08
BRF1Q92994 AC024614.2-201ENST00000577584 372 ntBASIC2.04□□□□□ -2.08
BRF1Q92994 MIR3618-201ENST00000580330 88 ntBASIC2.04□□□□□ -2.08
BRF1Q92994 AL627230.6-201ENST00000611129 280 ntBASIC2.04□□□□□ -2.08
BRF1Q92994 MIR4251-201ENST00000635819 61 ntBASIC2.04□□□□□ -2.08
BRF1Q92994 SNORA51.5-201ENST00000384126 131 ntBASIC2.03□□□□□ -2.08
BRF1Q92994 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.03□□□□□ -2.08
BRF1Q92994 RNU7-41P-201ENST00000515917 61 ntBASIC2.03□□□□□ -2.08
BRF1Q92994 AL357312.1-201ENST00000603879 298 ntBASIC2.03□□□□□ -2.08
BRF1Q92994 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
BRF1Q92994 RNU6-816P-201ENST00000390914 107 ntBASIC2.02□□□□□ -2.09
BRF1Q92994 RNU6-1268P-201ENST00000391214 107 ntBASIC2.02□□□□□ -2.09
BRF1Q92994 RNU6-1239P-201ENST00000391310 107 ntBASIC2.02□□□□□ -2.09
BRF1Q92994 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.02□□□□□ -2.09
BRF1Q92994 MIR548AE2-201ENST00000583456 67 ntBASIC2.02□□□□□ -2.09
BRF1Q92994 MIR8081-201ENST00000611533 95 ntBASIC2.02□□□□□ -2.09
BRF1Q92994 MIR8065-201ENST00000620577 100 ntBASIC2.02□□□□□ -2.09
BRF1Q92994 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
BRF1Q92994 RNU6-363P-201ENST00000362895 105 ntBASIC2.01□□□□□ -2.09
BRF1Q92994 SNORD77B-201ENST00000391112 67 ntBASIC2.01□□□□□ -2.09
BRF1Q92994 RNU2-40P-201ENST00000410833 196 ntBASIC2.01□□□□□ -2.09
BRF1Q92994 RNU6-602P-201ENST00000411155 105 ntBASIC2.01□□□□□ -2.09
BRF1Q92994 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.01□□□□□ -2.09
BRF1Q92994 snoU13.15-201ENST00000459407 104 ntBASIC2.01□□□□□ -2.09
BRF1Q92994 SNORD111.1-201ENST00000516421 86 ntBASIC2.01□□□□□ -2.09
BRF1Q92994 Y_RNA.694-201ENST00000516677 117 ntBASIC2.01□□□□□ -2.09
BRF1Q92994 MIR548AO-201ENST00000579992 96 ntBASIC2.01□□□□□ -2.09
BRF1Q92994 Y_RNA.773-201ENST00000607168 90 ntBASIC2.01□□□□□ -2.09
BRF1Q92994 GHRLOS.1-201ENST00000610995 70 ntBASIC2.01□□□□□ -2.09
BRF1Q92994 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.01□□□□□ -2.09
BRF1Q92994 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
BRF1Q92994 RNA5SP48-201ENST00000363969 126 ntBASIC2□□□□□ -2.09
BRF1Q92994 MIR30A-201ENST00000385092 71 ntBASIC2□□□□□ -2.09
BRF1Q92994 MIR1289-2-201ENST00000408360 111 ntBASIC2□□□□□ -2.09
BRF1Q92994 RPL39P25-201ENST00000449384 154 ntBASIC2□□□□□ -2.09
BRF1Q92994 MIR1270-201ENST00000459320 83 ntBASIC2□□□□□ -2.09
BRF1Q92994 RNA5SP170-201ENST00000517150 101 ntBASIC2□□□□□ -2.09
BRF1Q92994 RNU6-537P-201ENST00000517277 103 ntBASIC2□□□□□ -2.09
BRF1Q92994 AC012493.3-201ENST00000604494 112 ntBASIC2□□□□□ -2.09
BRF1Q92994 FAS-AS1.2-201ENST00000620386 170 ntBASIC2□□□□□ -2.09
BRF1Q92994 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
BRF1Q92994 MIR302D-201ENST00000362275 68 ntBASIC1.99□□□□□ -2.09
BRF1Q92994 Y_RNA.43-201ENST00000362670 111 ntBASIC1.99□□□□□ -2.09
BRF1Q92994 SNORD33-201ENST00000362761 85 ntBASIC1.99□□□□□ -2.09
BRF1Q92994 Y_RNA.507-201ENST00000384500 99 ntBASIC1.99□□□□□ -2.09
BRF1Q92994 RNU6-922P-201ENST00000516753 99 ntBASIC1.99□□□□□ -2.09
BRF1Q92994 RNU6-295P-201ENST00000516901 104 ntBASIC1.99□□□□□ -2.09
BRF1Q92994 AP001318.4-201ENST00000616637 121 ntBASIC1.99□□□□□ -2.09
BRF1Q92994 MIR1255B1-201ENST00000636325 63 ntBASIC1.99□□□□□ -2.09
BRF1Q92994 WWP1P1-201ENST00000466609 2769 ntBASIC1.98□□□□□ -2.09
BRF1Q92994 Y_RNA.544-201ENST00000384650 113 ntBASIC1.98□□□□□ -2.09
BRF1Q92994 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.98□□□□□ -2.09
BRF1Q92994 snoU13.9-201ENST00000458927 103 ntBASIC1.98□□□□□ -2.09
BRF1Q92994 RNU6-904P-201ENST00000516206 101 ntBASIC1.98□□□□□ -2.09
BRF1Q92994 Y_RNA.677-201ENST00000516401 85 ntBASIC1.98□□□□□ -2.09
BRF1Q92994 CYP3A52P-201ENST00000563326 91 ntBASIC1.98□□□□□ -2.09
BRF1Q92994 AL096840.1-201ENST00000603287 93 ntBASIC1.98□□□□□ -2.09
BRF1Q92994 RNU4-67P-201ENST00000364569 141 ntBASIC1.97□□□□□ -2.09
BRF1Q92994 Y_RNA.348-201ENST00000365403 103 ntBASIC1.97□□□□□ -2.09
BRF1Q92994 SNORA11.2-201ENST00000408318 127 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms