Protein–RNA interactions for Protein: Q92989

CLP1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1Q92989 RNU6-409P-201ENST00000384114 104 ntBASIC2.41□□□□□ -2.02
CLP1Q92989 Y_RNA.544-201ENST00000384650 113 ntBASIC2.41□□□□□ -2.02
CLP1Q92989 MIR221-201ENST00000385135 110 ntBASIC2.41□□□□□ -2.02
CLP1Q92989 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CLP1Q92989 RNU6-602P-201ENST00000411155 105 ntBASIC2.41□□□□□ -2.02
CLP1Q92989 AL627230.6-201ENST00000611129 280 ntBASIC2.41□□□□□ -2.02
CLP1Q92989 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CLP1Q92989 RNU6-363P-201ENST00000362895 105 ntBASIC2.4□□□□□ -2.03
CLP1Q92989 RNU4-36P-201ENST00000364294 144 ntBASIC2.4□□□□□ -2.03
CLP1Q92989 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CLP1Q92989 RNU6-733P-201ENST00000410759 104 ntBASIC2.4□□□□□ -2.03
CLP1Q92989 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CLP1Q92989 AC009474.2-201ENST00000451383 136 ntBASIC2.4□□□□□ -2.03
CLP1Q92989 Y_RNA.773-201ENST00000607168 90 ntBASIC2.4□□□□□ -2.03
CLP1Q92989 MIR6895-201ENST00000613497 78 ntBASIC2.4□□□□□ -2.03
CLP1Q92989 MIR8065-201ENST00000620577 100 ntBASIC2.4□□□□□ -2.03
CLP1Q92989 MIR6766-201ENST00000622641 72 ntBASIC2.4□□□□□ -2.03
CLP1Q92989 MIR1255B1-201ENST00000636325 63 ntBASIC2.4□□□□□ -2.03
CLP1Q92989 SNORD33-201ENST00000362761 85 ntBASIC2.39□□□□□ -2.03
CLP1Q92989 Y_RNA.78-201ENST00000362970 110 ntBASIC2.39□□□□□ -2.03
CLP1Q92989 SNORA67.3-201ENST00000384366 140 ntBASIC2.39□□□□□ -2.03
CLP1Q92989 SNORA18-201ENST00000384416 132 ntBASIC2.39□□□□□ -2.03
CLP1Q92989 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.39□□□□□ -2.03
CLP1Q92989 HMGN2P19-201ENST00000425149 265 ntBASIC2.39□□□□□ -2.03
CLP1Q92989 RNA5SP233-201ENST00000459153 113 ntBASIC2.39□□□□□ -2.03
CLP1Q92989 RNA5SP200-201ENST00000516360 103 ntBASIC2.39□□□□□ -2.03
CLP1Q92989 Y_RNA.694-201ENST00000516677 117 ntBASIC2.39□□□□□ -2.03
CLP1Q92989 AC103810.8-201ENST00000607347 118 ntBASIC2.39□□□□□ -2.03
CLP1Q92989 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLP1Q92989 MIR6073-201ENST00000352083 89 ntBASIC2.38□□□□□ -2.03
CLP1Q92989 MIR21-201ENST00000362134 72 ntBASIC2.38□□□□□ -2.03
CLP1Q92989 RNU6-616P-201ENST00000384353 107 ntBASIC2.38□□□□□ -2.03
CLP1Q92989 RNU6-1065P-201ENST00000384513 106 ntBASIC2.38□□□□□ -2.03
CLP1Q92989 U8.13-201ENST00000390842 128 ntBASIC2.38□□□□□ -2.03
CLP1Q92989 RNU6-250P-201ENST00000516958 103 ntBASIC2.38□□□□□ -2.03
CLP1Q92989 AC079140.2-201ENST00000506193 142 ntBASIC2.37□□□□□ -2.03
CLP1Q92989 RNA5SP458-201ENST00000516188 119 ntBASIC2.37□□□□□ -2.03
CLP1Q92989 DEFB131E-201ENST00000532329 154 ntBASIC2.37□□□□□ -2.03
CLP1Q92989 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLP1Q92989 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.37□□□□□ -2.03
CLP1Q92989 ZNF355P-201ENST00000427301 3216 ntBASIC2.36□□□□□ -2.03
CLP1Q92989 RNU6-342P-201ENST00000384521 104 ntBASIC2.36□□□□□ -2.03
CLP1Q92989 SNORA26.9-201ENST00000391322 122 ntBASIC2.36□□□□□ -2.03
CLP1Q92989 RNA5SP237-201ENST00000410414 113 ntBASIC2.36□□□□□ -2.03
CLP1Q92989 SNORA7.5-201ENST00000410672 110 ntBASIC2.36□□□□□ -2.03
CLP1Q92989 RPL31P63-201ENST00000422565 375 ntBASIC2.36□□□□□ -2.03
CLP1Q92989 SNORA40.13-201ENST00000516379 120 ntBASIC2.36□□□□□ -2.03
CLP1Q92989 Y_RNA.676-201ENST00000516393 96 ntBASIC2.36□□□□□ -2.03
CLP1Q92989 RNA5SP82-201ENST00000516707 92 ntBASIC2.36□□□□□ -2.03
CLP1Q92989 AC019176.1-201ENST00000518519 225 ntBASIC2.36□□□□□ -2.03
CLP1Q92989 MIR3937-201ENST00000580135 106 ntBASIC2.36□□□□□ -2.03
CLP1Q92989 MIR5694-201ENST00000581190 76 ntBASIC2.36□□□□□ -2.03
CLP1Q92989 MIR3192-201ENST00000584920 77 ntBASIC2.36□□□□□ -2.03
CLP1Q92989 AL096861.1-201ENST00000610899 123 ntBASIC2.36□□□□□ -2.03
CLP1Q92989 Y_RNA.818-201ENST00000618813 71 ntBASIC2.36□□□□□ -2.03
CLP1Q92989 Y_RNA.10-201ENST00000362371 110 ntBASIC2.35□□□□□ -2.03
CLP1Q92989 MIR590-201ENST00000385008 97 ntBASIC2.35□□□□□ -2.03
CLP1Q92989 AC005908.1-201ENST00000468701 347 ntBASIC2.35□□□□□ -2.03
CLP1Q92989 RNU6-295P-201ENST00000516901 104 ntBASIC2.35□□□□□ -2.03
CLP1Q92989 AL596028.1-201ENST00000326971 197 ntBASIC2.34□□□□□ -2.03
CLP1Q92989 RNU6-1237P-201ENST00000384777 107 ntBASIC2.34□□□□□ -2.03
CLP1Q92989 MIR144-201ENST00000384886 86 ntBASIC2.34□□□□□ -2.03
CLP1Q92989 RNU6-1086P-201ENST00000410930 100 ntBASIC2.34□□□□□ -2.03
CLP1Q92989 AC090844.1-201ENST00000422019 156 ntBASIC2.34□□□□□ -2.03
CLP1Q92989 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.34□□□□□ -2.03
CLP1Q92989 RNU6-970P-201ENST00000516312 107 ntBASIC2.34□□□□□ -2.03
CLP1Q92989 MIR6132-201ENST00000622083 109 ntBASIC2.34□□□□□ -2.03
CLP1Q92989 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CLP1Q92989 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CLP1Q92989 RNU6-1298P-201ENST00000362456 101 ntBASIC2.33□□□□□ -2.04
CLP1Q92989 Y_RNA.43-201ENST00000362670 111 ntBASIC2.33□□□□□ -2.04
CLP1Q92989 RNU6-396P-201ENST00000365369 105 ntBASIC2.33□□□□□ -2.04
CLP1Q92989 MIR676-201ENST00000390702 67 ntBASIC2.33□□□□□ -2.04
CLP1Q92989 AC019129.1-201ENST00000403786 261 ntBASIC2.33□□□□□ -2.04
CLP1Q92989 RNA5SP181-201ENST00000410246 98 ntBASIC2.33□□□□□ -2.04
CLP1Q92989 RPS27P21-201ENST00000486977 252 ntBASIC2.33□□□□□ -2.04
CLP1Q92989 RNU6-904P-201ENST00000516206 101 ntBASIC2.33□□□□□ -2.04
CLP1Q92989 RNU7-35P-201ENST00000517174 62 ntBASIC2.33□□□□□ -2.04
CLP1Q92989 MIR3198-2-201ENST00000577868 80 ntBASIC2.33□□□□□ -2.04
CLP1Q92989 MIR4694-201ENST00000578534 80 ntBASIC2.33□□□□□ -2.04
CLP1Q92989 SNRPGP19-201ENST00000603826 189 ntBASIC2.33□□□□□ -2.04
CLP1Q92989 AP001318.4-201ENST00000616637 121 ntBASIC2.33□□□□□ -2.04
CLP1Q92989 AL512310.12-203ENST00000640543 90 ntBASIC2.33□□□□□ -2.04
CLP1Q92989 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.32□□□□□ -2.04
CLP1Q92989 RNY3P2-201ENST00000362918 102 ntBASIC2.32□□□□□ -2.04
CLP1Q92989 SNORD1A-201ENST00000364968 72 ntBASIC2.32□□□□□ -2.04
CLP1Q92989 Y_RNA.360-201ENST00000365512 102 ntBASIC2.32□□□□□ -2.04
CLP1Q92989 SNORA19.1-201ENST00000410656 129 ntBASIC2.32□□□□□ -2.04
CLP1Q92989 AL356379.1-201ENST00000414105 126 ntBASIC2.32□□□□□ -2.04
CLP1Q92989 RPL30P7-201ENST00000479312 323 ntBASIC2.32□□□□□ -2.04
CLP1Q92989 RNU6-521P-201ENST00000516663 105 ntBASIC2.32□□□□□ -2.04
CLP1Q92989 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.32□□□□□ -2.04
CLP1Q92989 MIR6840-201ENST00000611937 71 ntBASIC2.32□□□□□ -2.04
CLP1Q92989 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLP1Q92989 SNORA25.3-201ENST00000363205 127 ntBASIC2.31□□□□□ -2.04
CLP1Q92989 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.31□□□□□ -2.04
CLP1Q92989 SNORA48.3-201ENST00000391081 134 ntBASIC2.31□□□□□ -2.04
CLP1Q92989 RNY4P30-201ENST00000410216 95 ntBASIC2.31□□□□□ -2.04
CLP1Q92989 MIR1270-201ENST00000459320 83 ntBASIC2.31□□□□□ -2.04
CLP1Q92989 RNU7-79P-201ENST00000516082 62 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms