Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 SCARNA24.2-201ENST00000516968 130 ntBASIC0.07□□□□□ -2.4
UFD1Q92890 AC112693.2-201ENST00000556538 232 ntBASIC0.07□□□□□ -2.4
UFD1Q92890 AC113195.1-201ENST00000579952 141 ntBASIC0.07□□□□□ -2.4
UFD1Q92890 AL160413.1-201ENST00000622780 310 ntBASIC0.07□□□□□ -2.4
UFD1Q92890 MIR376A2-201ENST00000636782 80 ntBASIC0.07□□□□□ -2.4
UFD1Q92890 MTND4P29-201ENST00000503122 1372 ntBASIC0.06□□□□□ -2.4
UFD1Q92890 RNU6-1099P-201ENST00000363533 107 ntBASIC0.06□□□□□ -2.4
UFD1Q92890 Y_RNA.158-201ENST00000363651 101 ntBASIC0.06□□□□□ -2.4
UFD1Q92890 Y_RNA.430-201ENST00000384081 110 ntBASIC0.06□□□□□ -2.4
UFD1Q92890 Y_RNA.527-201ENST00000384573 102 ntBASIC0.06□□□□□ -2.4
UFD1Q92890 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.06□□□□□ -2.4
UFD1Q92890 RNU2-59P-201ENST00000410482 191 ntBASIC0.06□□□□□ -2.4
UFD1Q92890 MTND5P22-201ENST00000458380 195 ntBASIC0.06□□□□□ -2.4
UFD1Q92890 Y_RNA.13-201ENST00000362403 112 ntBASIC0.05□□□□□ -2.4
UFD1Q92890 Y_RNA.23-201ENST00000362496 106 ntBASIC0.05□□□□□ -2.4
UFD1Q92890 Y_RNA.117-201ENST00000363294 101 ntBASIC0.05□□□□□ -2.4
UFD1Q92890 Y_RNA.128-201ENST00000363391 112 ntBASIC0.05□□□□□ -2.4
UFD1Q92890 RNU6-597P-201ENST00000365620 102 ntBASIC0.05□□□□□ -2.4
UFD1Q92890 AL606845.1-201ENST00000404881 255 ntBASIC0.05□□□□□ -2.4
UFD1Q92890 RNU7-80P-201ENST00000459562 61 ntBASIC0.05□□□□□ -2.4
UFD1Q92890 RNA5SP268-201ENST00000516828 124 ntBASIC0.05□□□□□ -2.4
UFD1Q92890 MIR4514-201ENST00000581410 57 ntBASIC0.05□□□□□ -2.4
UFD1Q92890 MIR5197-201ENST00000583721 112 ntBASIC0.05□□□□□ -2.4
UFD1Q92890 RNU6-403P-201ENST00000363163 104 ntBASIC0.04□□□□□ -2.4
UFD1Q92890 RNY1-201ENST00000364228 113 ntBASIC0.04□□□□□ -2.4
UFD1Q92890 RNU5E-4P-201ENST00000364931 120 ntBASIC0.04□□□□□ -2.4
UFD1Q92890 Y_RNA.454-201ENST00000384224 113 ntBASIC0.04□□□□□ -2.4
UFD1Q92890 Y_RNA.542-201ENST00000384641 111 ntBASIC0.04□□□□□ -2.4
UFD1Q92890 U8.15-201ENST00000390947 134 ntBASIC0.04□□□□□ -2.4
UFD1Q92890 AC113618.1-201ENST00000416747 285 ntBASIC0.04□□□□□ -2.4
UFD1Q92890 snoU13.18-201ENST00000459483 104 ntBASIC0.04□□□□□ -2.4
UFD1Q92890 Y_RNA.711-201ENST00000516993 102 ntBASIC0.04□□□□□ -2.4
UFD1Q92890 MIR6082-201ENST00000613604 109 ntBASIC0.04□□□□□ -2.4
UFD1Q92890 AC091932.4-201ENST00000623386 200 ntBASIC0.04□□□□□ -2.4
UFD1Q92890 AC134503.1-201ENST00000633048 54 ntBASIC0.04□□□□□ -2.4
UFD1Q92890 Y_RNA.32-201ENST00000362589 110 ntBASIC0.03□□□□□ -2.4
UFD1Q92890 Y_RNA.199-201ENST00000364014 102 ntBASIC0.03□□□□□ -2.4
UFD1Q92890 snoU2_19.4-201ENST00000364329 80 ntBASIC0.03□□□□□ -2.4
UFD1Q92890 Y_RNA.460-201ENST00000384255 102 ntBASIC0.03□□□□□ -2.4
UFD1Q92890 MIR616-201ENST00000385293 97 ntBASIC0.03□□□□□ -2.4
UFD1Q92890 RNU6-1228P-201ENST00000391014 107 ntBASIC0.03□□□□□ -2.4
UFD1Q92890 Y_RNA.588-201ENST00000391254 102 ntBASIC0.03□□□□□ -2.4
UFD1Q92890 RNU6-1203P-201ENST00000410703 110 ntBASIC0.03□□□□□ -2.4
UFD1Q92890 RNU6-453P-201ENST00000516819 85 ntBASIC0.03□□□□□ -2.4
UFD1Q92890 RNU6-765P-201ENST00000516916 99 ntBASIC0.03□□□□□ -2.4
UFD1Q92890 MIR3152-201ENST00000579801 74 ntBASIC0.03□□□□□ -2.4
UFD1Q92890 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.03□□□□□ -2.4
UFD1Q92890 MIR3129-201ENST00000581095 76 ntBASIC0.03□□□□□ -2.4
UFD1Q92890 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
UFD1Q92890 Y_RNA.44-201ENST00000362676 108 ntBASIC0.02□□□□□ -2.41
UFD1Q92890 SNORA42.1-201ENST00000363515 137 ntBASIC0.02□□□□□ -2.41
UFD1Q92890 Y_RNA.174-201ENST00000363781 105 ntBASIC0.02□□□□□ -2.41
UFD1Q92890 RNY1P4-201ENST00000384595 115 ntBASIC0.02□□□□□ -2.41
UFD1Q92890 AC141846.1-201ENST00000568348 142 ntBASIC0.02□□□□□ -2.41
UFD1Q92890 MIR4680-201ENST00000580906 66 ntBASIC0.02□□□□□ -2.41
UFD1Q92890 AC010487.4-201ENST00000637027 61 ntBASIC0.02□□□□□ -2.41
UFD1Q92890 AL596211.1-201ENST00000569873 2277 ntBASIC0.02□□□□□ -2.41
UFD1Q92890 Y_RNA.153-201ENST00000363615 91 ntBASIC0.01□□□□□ -2.41
UFD1Q92890 SNORA20-201ENST00000384662 132 ntBASIC0.01□□□□□ -2.41
UFD1Q92890 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
UFD1Q92890 MIR548P-201ENST00000408336 84 ntBASIC0.01□□□□□ -2.41
UFD1Q92890 Y_RNA.618-201ENST00000410949 107 ntBASIC0.01□□□□□ -2.41
UFD1Q92890 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.01□□□□□ -2.41
UFD1Q92890 SNORD2.1-201ENST00000458762 69 ntBASIC0.01□□□□□ -2.41
UFD1Q92890 SNORA31.14-201ENST00000516728 116 ntBASIC0.01□□□□□ -2.41
UFD1Q92890 RNU6-135P-201ENST00000516769 101 ntBASIC0.01□□□□□ -2.41
UFD1Q92890 MIR4491-201ENST00000581087 68 ntBASIC0.01□□□□□ -2.41
UFD1Q92890 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.01□□□□□ -2.41
UFD1Q92890 MIR7107-201ENST00000611489 80 ntBASIC0.01□□□□□ -2.41
UFD1Q92890 MIR6841-201ENST00000637129 72 ntBASIC0.01□□□□□ -2.41
UFD1Q92890 SNORA9.1-201ENST00000362412 131 ntBASIC0□□□□□ -2.41
UFD1Q92890 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
UFD1Q92890 RNU4-67P-201ENST00000364569 141 ntBASIC0□□□□□ -2.41
UFD1Q92890 AC096949.1-201ENST00000412047 152 ntBASIC0□□□□□ -2.41
UFD1Q92890 SEPT7P4-201ENST00000437076 306 ntBASIC0□□□□□ -2.41
UFD1Q92890 MTATP6P23-201ENST00000440153 476 ntBASIC0□□□□□ -2.41
UFD1Q92890 AC069271.1-201ENST00000445577 156 ntBASIC0□□□□□ -2.41
UFD1Q92890 MIR6755-201ENST00000619993 66 ntBASIC0□□□□□ -2.41
UFD1Q92890 MIR6828-201ENST00000636181 60 ntBASIC0□□□□□ -2.41
UFD1Q92890 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
UFD1Q92890 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 RNA5SP214-201ENST00000363378 118 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 RNU6-949P-201ENST00000384040 107 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 SNORA72.6-201ENST00000384520 129 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 SUMO1P3-201ENST00000439961 304 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 RNA5SP227-201ENST00000516184 113 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 RNU6-570P-201ENST00000517051 105 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 RN7SL793P-201ENST00000583259 296 ntBASIC-0.01□□□□□ -2.41
UFD1Q92890 AL365205.2-201ENST00000594586 68 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms