Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 Y_RNA.52-201ENST00000362760 96 ntBASIC1.05□□□□□ -2.24
RAB40AQ8WXH6 RPS29P28-201ENST00000446439 141 ntBASIC1.05□□□□□ -2.24
RAB40AQ8WXH6 AC004223.1-201ENST00000479840 271 ntBASIC1.05□□□□□ -2.24
RAB40AQ8WXH6 RNU7-121P-201ENST00000516604 62 ntBASIC1.05□□□□□ -2.24
RAB40AQ8WXH6 RNU6-94P-201ENST00000607728 107 ntBASIC1.05□□□□□ -2.24
RAB40AQ8WXH6 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
RAB40AQ8WXH6 SNORA20-201ENST00000384662 132 ntBASIC1.04□□□□□ -2.24
RAB40AQ8WXH6 RNU6-602P-201ENST00000411155 105 ntBASIC1.04□□□□□ -2.24
RAB40AQ8WXH6 RPS3AP1-201ENST00000413190 320 ntBASIC1.04□□□□□ -2.24
RAB40AQ8WXH6 FABP5P4-201ENST00000437203 171 ntBASIC1.04□□□□□ -2.24
RAB40AQ8WXH6 RNU7-45P-201ENST00000459460 63 ntBASIC1.04□□□□□ -2.24
RAB40AQ8WXH6 FTX_2.1-201ENST00000618816 94 ntBASIC1.04□□□□□ -2.24
RAB40AQ8WXH6 MIR6717-201ENST00000622747 73 ntBASIC1.04□□□□□ -2.24
RAB40AQ8WXH6 MIR3658-201ENST00000636291 56 ntBASIC1.04□□□□□ -2.24
RAB40AQ8WXH6 Y_RNA.354-201ENST00000365448 111 ntBASIC1.03□□□□□ -2.24
RAB40AQ8WXH6 RNU6-588P-201ENST00000410281 105 ntBASIC1.03□□□□□ -2.24
RAB40AQ8WXH6 RNU2-64P-201ENST00000411315 191 ntBASIC1.03□□□□□ -2.24
RAB40AQ8WXH6 AC244023.1-201ENST00000426884 112 ntBASIC1.03□□□□□ -2.24
RAB40AQ8WXH6 AC067940.1-201ENST00000458411 300 ntBASIC1.03□□□□□ -2.24
RAB40AQ8WXH6 MIR3152-201ENST00000579801 74 ntBASIC1.03□□□□□ -2.24
RAB40AQ8WXH6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.03□□□□□ -2.24
RAB40AQ8WXH6 AC242498.1-201ENST00000604134 111 ntBASIC1.03□□□□□ -2.24
RAB40AQ8WXH6 AC091895.1-201ENST00000624494 256 ntBASIC1.03□□□□□ -2.24
RAB40AQ8WXH6 RNU6-1319P-201ENST00000390855 104 ntBASIC1.02□□□□□ -2.25
RAB40AQ8WXH6 RNU6-747P-201ENST00000390928 104 ntBASIC1.02□□□□□ -2.25
RAB40AQ8WXH6 RNU6-241P-201ENST00000391148 104 ntBASIC1.02□□□□□ -2.25
RAB40AQ8WXH6 SNORA26.6-201ENST00000391256 115 ntBASIC1.02□□□□□ -2.25
RAB40AQ8WXH6 RNU6-177P-201ENST00000411257 104 ntBASIC1.02□□□□□ -2.25
RAB40AQ8WXH6 RNU7-62P-201ENST00000458856 62 ntBASIC1.02□□□□□ -2.25
RAB40AQ8WXH6 OR2A41P-201ENST00000473586 105 ntBASIC1.02□□□□□ -2.25
RAB40AQ8WXH6 HSPE1P19-201ENST00000603327 295 ntBASIC1.02□□□□□ -2.25
RAB40AQ8WXH6 AC098479.1-201ENST00000609225 154 ntBASIC1.02□□□□□ -2.25
RAB40AQ8WXH6 Y_RNA.150-201ENST00000363562 102 ntBASIC1.01□□□□□ -2.25
RAB40AQ8WXH6 RNU6-580P-201ENST00000365159 107 ntBASIC1.01□□□□□ -2.25
RAB40AQ8WXH6 AC104465.1-201ENST00000611365 139 ntBASIC1.01□□□□□ -2.25
RAB40AQ8WXH6 AC012676.2-201ENST00000619258 186 ntBASIC1.01□□□□□ -2.25
RAB40AQ8WXH6 AC021613.1-201ENST00000623880 111 ntBASIC1.01□□□□□ -2.25
RAB40AQ8WXH6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1□□□□□ -2.25
RAB40AQ8WXH6 RNU6-449P-201ENST00000383914 107 ntBASIC1□□□□□ -2.25
RAB40AQ8WXH6 Y_RNA.430-201ENST00000384081 110 ntBASIC1□□□□□ -2.25
RAB40AQ8WXH6 RNY1P6-201ENST00000384193 109 ntBASIC1□□□□□ -2.25
RAB40AQ8WXH6 Y_RNA.497-201ENST00000384447 98 ntBASIC1□□□□□ -2.25
RAB40AQ8WXH6 MTATP6P21-201ENST00000440681 189 ntBASIC1□□□□□ -2.25
RAB40AQ8WXH6 PDCD5P2-201ENST00000507570 312 ntBASIC1□□□□□ -2.25
RAB40AQ8WXH6 MIR3668-201ENST00000582138 75 ntBASIC1□□□□□ -2.25
RAB40AQ8WXH6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1□□□□□ -2.25
RAB40AQ8WXH6 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
RAB40AQ8WXH6 AL391516.1-201ENST00000554380 2449 ntBASIC0.99□□□□□ -2.25
RAB40AQ8WXH6 RNU4-16P-201ENST00000364737 141 ntBASIC0.99□□□□□ -2.25
RAB40AQ8WXH6 RNU6-53P-201ENST00000365367 106 ntBASIC0.99□□□□□ -2.25
RAB40AQ8WXH6 RNU6-886P-201ENST00000384319 105 ntBASIC0.99□□□□□ -2.25
RAB40AQ8WXH6 MIR588-201ENST00000384900 83 ntBASIC0.99□□□□□ -2.25
RAB40AQ8WXH6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.99□□□□□ -2.25
RAB40AQ8WXH6 UBL5P1-201ENST00000507979 193 ntBASIC0.99□□□□□ -2.25
RAB40AQ8WXH6 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
RAB40AQ8WXH6 MIR8070-201ENST00000616510 88 ntBASIC0.99□□□□□ -2.25
RAB40AQ8WXH6 RNU4-11P-201ENST00000365287 132 ntBASIC0.98□□□□□ -2.25
RAB40AQ8WXH6 SNORD18B-201ENST00000365659 72 ntBASIC0.98□□□□□ -2.25
RAB40AQ8WXH6 SNORD116-18-201ENST00000383961 92 ntBASIC0.98□□□□□ -2.25
RAB40AQ8WXH6 Y_RNA.584-201ENST00000391090 114 ntBASIC0.98□□□□□ -2.25
RAB40AQ8WXH6 PCNPP3-201ENST00000393579 471 ntBASIC0.98□□□□□ -2.25
RAB40AQ8WXH6 RNA5SP236-201ENST00000516169 116 ntBASIC0.98□□□□□ -2.25
RAB40AQ8WXH6 AC112693.2-201ENST00000556538 232 ntBASIC0.98□□□□□ -2.25
RAB40AQ8WXH6 MIR6740-201ENST00000618268 113 ntBASIC0.98□□□□□ -2.25
RAB40AQ8WXH6 SNORA22.1-201ENST00000362701 134 ntBASIC0.97□□□□□ -2.25
RAB40AQ8WXH6 RNU6-151P-201ENST00000364158 107 ntBASIC0.97□□□□□ -2.25
RAB40AQ8WXH6 Y_RNA.555-201ENST00000384673 110 ntBASIC0.97□□□□□ -2.25
RAB40AQ8WXH6 SNORD12C-201ENST00000386307 89 ntBASIC0.97□□□□□ -2.25
RAB40AQ8WXH6 Y_RNA.580-201ENST00000391004 95 ntBASIC0.97□□□□□ -2.25
RAB40AQ8WXH6 RNU6-394P-201ENST00000410735 107 ntBASIC0.97□□□□□ -2.25
RAB40AQ8WXH6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.97□□□□□ -2.25
RAB40AQ8WXH6 RNU6-893P-201ENST00000458841 100 ntBASIC0.97□□□□□ -2.25
RAB40AQ8WXH6 snoU13.2-201ENST00000459201 104 ntBASIC0.97□□□□□ -2.25
RAB40AQ8WXH6 MIR4295-201ENST00000585286 85 ntBASIC0.97□□□□□ -2.25
RAB40AQ8WXH6 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
RAB40AQ8WXH6 AL136317.1-201ENST00000612653 226 ntBASIC0.97□□□□□ -2.25
RAB40AQ8WXH6 Y_RNA.778-201ENST00000620203 90 ntBASIC0.97□□□□□ -2.25
RAB40AQ8WXH6 Y_RNA.8-201ENST00000362353 102 ntBASIC0.96□□□□□ -2.26
RAB40AQ8WXH6 SNORA25.9-201ENST00000365087 128 ntBASIC0.96□□□□□ -2.26
RAB40AQ8WXH6 RNU6-934P-201ENST00000365154 107 ntBASIC0.96□□□□□ -2.26
RAB40AQ8WXH6 RNU6-1130P-201ENST00000365434 107 ntBASIC0.96□□□□□ -2.26
RAB40AQ8WXH6 SNORD89-201ENST00000390981 114 ntBASIC0.96□□□□□ -2.26
RAB40AQ8WXH6 RNU6-1165P-201ENST00000410119 107 ntBASIC0.96□□□□□ -2.26
RAB40AQ8WXH6 RNA5SP247-201ENST00000411181 105 ntBASIC0.96□□□□□ -2.26
RAB40AQ8WXH6 SNORD83.1-201ENST00000411362 77 ntBASIC0.96□□□□□ -2.26
RAB40AQ8WXH6 U7.7-201ENST00000459276 60 ntBASIC0.96□□□□□ -2.26
RAB40AQ8WXH6 snoU13.21-201ENST00000459368 105 ntBASIC0.96□□□□□ -2.26
RAB40AQ8WXH6 RNA5SP255-201ENST00000516370 107 ntBASIC0.96□□□□□ -2.26
RAB40AQ8WXH6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.96□□□□□ -2.26
RAB40AQ8WXH6 MIR6841-201ENST00000637129 72 ntBASIC0.96□□□□□ -2.26
RAB40AQ8WXH6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
RAB40AQ8WXH6 AC010332.2-201ENST00000613083 1904 ntBASIC0.95□□□□□ -2.26
RAB40AQ8WXH6 MIR1-1-201ENST00000362147 71 ntBASIC0.95□□□□□ -2.26
RAB40AQ8WXH6 RNU6-690P-201ENST00000365242 106 ntBASIC0.95□□□□□ -2.26
RAB40AQ8WXH6 SNORA22-201ENST00000383907 134 ntBASIC0.95□□□□□ -2.26
RAB40AQ8WXH6 RNU6-804P-201ENST00000384286 107 ntBASIC0.95□□□□□ -2.26
RAB40AQ8WXH6 SNORA22C-201ENST00000384614 134 ntBASIC0.95□□□□□ -2.26
RAB40AQ8WXH6 MIR499A-201ENST00000384903 122 ntBASIC0.95□□□□□ -2.26
RAB40AQ8WXH6 MIR100-201ENST00000385259 80 ntBASIC0.95□□□□□ -2.26
RAB40AQ8WXH6 MIR1827-201ENST00000408549 66 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 218.2 ms