Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.13□□□□□ -2.43
LMX1AQ8TE12 SNORD28-201ENST00000384706 75 ntBASIC-0.13□□□□□ -2.43
LMX1AQ8TE12 RNU6-291P-201ENST00000384720 107 ntBASIC-0.13□□□□□ -2.43
LMX1AQ8TE12 MIR106A-201ENST00000384870 81 ntBASIC-0.13□□□□□ -2.43
LMX1AQ8TE12 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.13□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.13□□□□□ -2.43
LMX1AQ8TE12 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
LMX1AQ8TE12 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.13□□□□□ -2.43
LMX1AQ8TE12 AC097639.2-201ENST00000603159 172 ntBASIC-0.13□□□□□ -2.43
LMX1AQ8TE12 AC007485.1-201ENST00000616755 206 ntBASIC-0.13□□□□□ -2.43
LMX1AQ8TE12 AC091304.10-201ENST00000641554 121 ntBASIC-0.13□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.14□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.14□□□□□ -2.43
LMX1AQ8TE12 SNORA32.1-201ENST00000364514 115 ntBASIC-0.14□□□□□ -2.43
LMX1AQ8TE12 RNU6-484P-201ENST00000384016 107 ntBASIC-0.14□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.14□□□□□ -2.43
LMX1AQ8TE12 MIR610-201ENST00000385139 96 ntBASIC-0.14□□□□□ -2.43
LMX1AQ8TE12 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.14□□□□□ -2.43
LMX1AQ8TE12 MIR1912-201ENST00000410389 80 ntBASIC-0.14□□□□□ -2.43
LMX1AQ8TE12 RNA5SP261-201ENST00000410536 106 ntBASIC-0.14□□□□□ -2.43
LMX1AQ8TE12 RBMX2P4-201ENST00000441256 376 ntBASIC-0.14□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.14□□□□□ -2.43
LMX1AQ8TE12 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.14□□□□□ -2.43
LMX1AQ8TE12 MIR4491-201ENST00000581087 68 ntBASIC-0.14□□□□□ -2.43
LMX1AQ8TE12 MIR4639-201ENST00000584938 69 ntBASIC-0.14□□□□□ -2.43
LMX1AQ8TE12 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.14□□□□□ -2.43
LMX1AQ8TE12 AL360085.1-201ENST00000604713 532 ntBASIC-0.14□□□□□ -2.43
LMX1AQ8TE12 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.14□□□□□ -2.43
LMX1AQ8TE12 SNORA63.5-201ENST00000363548 123 ntBASIC-0.15□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.15□□□□□ -2.43
LMX1AQ8TE12 RNA5SP128-201ENST00000365305 116 ntBASIC-0.15□□□□□ -2.43
LMX1AQ8TE12 SNORA63.7-201ENST00000365579 123 ntBASIC-0.15□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.15□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.15□□□□□ -2.43
LMX1AQ8TE12 RPL39P34-201ENST00000477141 156 ntBASIC-0.15□□□□□ -2.43
LMX1AQ8TE12 RNA5SP153-201ENST00000516498 76 ntBASIC-0.15□□□□□ -2.43
LMX1AQ8TE12 RNU6-782P-201ENST00000516852 104 ntBASIC-0.15□□□□□ -2.43
LMX1AQ8TE12 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.15□□□□□ -2.43
LMX1AQ8TE12 MIR5589-201ENST00000579442 60 ntBASIC-0.15□□□□□ -2.43
LMX1AQ8TE12 MIR4636-201ENST00000582271 80 ntBASIC-0.15□□□□□ -2.43
LMX1AQ8TE12 MIR3925-201ENST00000584674 77 ntBASIC-0.15□□□□□ -2.43
LMX1AQ8TE12 AL670379.3-201ENST00000605040 251 ntBASIC-0.15□□□□□ -2.43
LMX1AQ8TE12 MIR376A1-201ENST00000616574 68 ntBASIC-0.15□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.16□□□□□ -2.44
LMX1AQ8TE12 RNU4-73P-201ENST00000363164 141 ntBASIC-0.16□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.16□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.16□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.16□□□□□ -2.44
LMX1AQ8TE12 MTND4LP30-201ENST00000454092 297 ntBASIC-0.16□□□□□ -2.44
LMX1AQ8TE12 RNA5SP476-201ENST00000516613 103 ntBASIC-0.16□□□□□ -2.44
LMX1AQ8TE12 SNORA25.16-201ENST00000516741 121 ntBASIC-0.16□□□□□ -2.44
LMX1AQ8TE12 IGLVI-20-201ENST00000519296 130 ntBASIC-0.16□□□□□ -2.44
LMX1AQ8TE12 AC141846.1-201ENST00000568348 142 ntBASIC-0.16□□□□□ -2.44
LMX1AQ8TE12 MIR3152-201ENST00000579801 74 ntBASIC-0.16□□□□□ -2.44
LMX1AQ8TE12 AL008718.3-201ENST00000610217 321 ntBASIC-0.16□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.16□□□□□ -2.44
LMX1AQ8TE12 MIR6841-201ENST00000637129 72 ntBASIC-0.16□□□□□ -2.44
LMX1AQ8TE12 MIR6086-201ENST00000638065 55 ntBASIC-0.16□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.17□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.17□□□□□ -2.44
LMX1AQ8TE12 RNU6-326P-201ENST00000365480 107 ntBASIC-0.17□□□□□ -2.44
LMX1AQ8TE12 RNU6-949P-201ENST00000384040 107 ntBASIC-0.17□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.17□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.17□□□□□ -2.44
LMX1AQ8TE12 SNORA27.4-201ENST00000516650 95 ntBASIC-0.17□□□□□ -2.44
LMX1AQ8TE12 AC006157.1-201ENST00000611750 366 ntBASIC-0.17□□□□□ -2.44
LMX1AQ8TE12 AC244669.1-204ENST00000621564 178 ntBASIC-0.17□□□□□ -2.44
LMX1AQ8TE12 snoU18.1-201ENST00000629629 71 ntBASIC-0.17□□□□□ -2.44
LMX1AQ8TE12 RNU6-403P-201ENST00000363163 104 ntBASIC-0.18□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.18□□□□□ -2.44
LMX1AQ8TE12 RNU4-10P-201ENST00000364383 140 ntBASIC-0.18□□□□□ -2.44
LMX1AQ8TE12 RNU6-290P-201ENST00000365212 101 ntBASIC-0.18□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.18□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.18□□□□□ -2.44
LMX1AQ8TE12 RNY3P5-201ENST00000384127 102 ntBASIC-0.18□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.18□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.18□□□□□ -2.44
LMX1AQ8TE12 MIR626-201ENST00000385032 94 ntBASIC-0.18□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.18□□□□□ -2.44
LMX1AQ8TE12 MIR1265-201ENST00000408444 86 ntBASIC-0.18□□□□□ -2.44
LMX1AQ8TE12 RNU6-121P-201ENST00000410525 99 ntBASIC-0.18□□□□□ -2.44
LMX1AQ8TE12 SNRPGP8-201ENST00000454064 226 ntBASIC-0.18□□□□□ -2.44
LMX1AQ8TE12 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.18□□□□□ -2.44
LMX1AQ8TE12 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.18□□□□□ -2.44
LMX1AQ8TE12 RNU6-897P-201ENST00000517135 105 ntBASIC-0.18□□□□□ -2.44
LMX1AQ8TE12 MIR1295B-201ENST00000636144 60 ntBASIC-0.18□□□□□ -2.44
LMX1AQ8TE12 UBE2WP1-201ENST00000362030 340 ntBASIC-0.19□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.19□□□□□ -2.44
LMX1AQ8TE12 SNORD114-31-201ENST00000363219 75 ntBASIC-0.19□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.19□□□□□ -2.44
LMX1AQ8TE12 SNORA1-201ENST00000384107 130 ntBASIC-0.19□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.19□□□□□ -2.44
LMX1AQ8TE12 MIR892B-201ENST00000401279 77 ntBASIC-0.19□□□□□ -2.44
LMX1AQ8TE12 RNA5SP237-201ENST00000410414 113 ntBASIC-0.19□□□□□ -2.44
LMX1AQ8TE12 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.19□□□□□ -2.44
LMX1AQ8TE12 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.19□□□□□ -2.44
LMX1AQ8TE12 AL731563.1-201ENST00000442202 214 ntBASIC-0.19□□□□□ -2.44
LMX1AQ8TE12 RNU7-165P-201ENST00000458864 60 ntBASIC-0.19□□□□□ -2.44
LMX1AQ8TE12 RNU7-80P-201ENST00000459562 61 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms