Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 RNU6-41P-201ENST00000384741 107 ntBASIC1.96□□□□□ -2.1
SHCBP1Q8NEM2 SUMO2P12-201ENST00000405924 140 ntBASIC1.96□□□□□ -2.1
SHCBP1Q8NEM2 RPL23AP6-201ENST00000446637 472 ntBASIC1.96□□□□□ -2.1
SHCBP1Q8NEM2 SNORD123-201ENST00000459473 70 ntBASIC1.96□□□□□ -2.1
SHCBP1Q8NEM2 RPL39P34-201ENST00000477141 156 ntBASIC1.96□□□□□ -2.1
SHCBP1Q8NEM2 RNA5SP170-201ENST00000517150 101 ntBASIC1.96□□□□□ -2.1
SHCBP1Q8NEM2 MIR4299-201ENST00000577899 72 ntBASIC1.96□□□□□ -2.1
SHCBP1Q8NEM2 MIR548AR-201ENST00000582191 57 ntBASIC1.96□□□□□ -2.1
SHCBP1Q8NEM2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.96□□□□□ -2.1
SHCBP1Q8NEM2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
SHCBP1Q8NEM2 Y_RNA.163-201ENST00000363702 113 ntBASIC1.95□□□□□ -2.1
SHCBP1Q8NEM2 Y_RNA.323-201ENST00000365157 109 ntBASIC1.95□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-1014P-201ENST00000383940 103 ntBASIC1.95□□□□□ -2.1
SHCBP1Q8NEM2 MIR548D2-201ENST00000384955 97 ntBASIC1.95□□□□□ -2.1
SHCBP1Q8NEM2 POLR2J4-204ENST00000418424 324 ntBASIC1.95□□□□□ -2.1
SHCBP1Q8NEM2 AL512326.2-201ENST00000426359 151 ntBASIC1.95□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-958P-201ENST00000516995 106 ntBASIC1.95□□□□□ -2.1
SHCBP1Q8NEM2 DNAJC19P9-201ENST00000555084 351 ntBASIC1.95□□□□□ -2.1
SHCBP1Q8NEM2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.95□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-94P-201ENST00000607728 107 ntBASIC1.95□□□□□ -2.1
SHCBP1Q8NEM2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
SHCBP1Q8NEM2 Y_RNA.49-201ENST00000362714 112 ntBASIC1.94□□□□□ -2.1
SHCBP1Q8NEM2 Y_RNA.309-201ENST00000365046 111 ntBASIC1.94□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-203P-201ENST00000384038 104 ntBASIC1.94□□□□□ -2.1
SHCBP1Q8NEM2 SNORA24-201ENST00000384096 131 ntBASIC1.94□□□□□ -2.1
SHCBP1Q8NEM2 Y_RNA.508-201ENST00000384502 114 ntBASIC1.94□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-360P-201ENST00000390944 104 ntBASIC1.94□□□□□ -2.1
SHCBP1Q8NEM2 RPS29P29-201ENST00000456396 171 ntBASIC1.94□□□□□ -2.1
SHCBP1Q8NEM2 RN7SL274P-201ENST00000492268 272 ntBASIC1.94□□□□□ -2.1
SHCBP1Q8NEM2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.94□□□□□ -2.1
SHCBP1Q8NEM2 MIR4419B-201ENST00000577260 68 ntBASIC1.94□□□□□ -2.1
SHCBP1Q8NEM2 MIR3163-201ENST00000581592 73 ntBASIC1.94□□□□□ -2.1
SHCBP1Q8NEM2 FAM106DP-201ENST00000586416 501 ntBASIC1.94□□□□□ -2.1
SHCBP1Q8NEM2 MIR8070-201ENST00000616510 88 ntBASIC1.94□□□□□ -2.1
SHCBP1Q8NEM2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.94□□□□□ -2.1
SHCBP1Q8NEM2 Y_RNA.43-201ENST00000362670 111 ntBASIC1.93□□□□□ -2.1
SHCBP1Q8NEM2 U8.6-201ENST00000364939 135 ntBASIC1.93□□□□□ -2.1
SHCBP1Q8NEM2 Y_RNA.328-201ENST00000365208 113 ntBASIC1.93□□□□□ -2.1
SHCBP1Q8NEM2 SNORA70.7-201ENST00000384159 133 ntBASIC1.93□□□□□ -2.1
SHCBP1Q8NEM2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-1319P-201ENST00000390855 104 ntBASIC1.93□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-747P-201ENST00000390928 104 ntBASIC1.93□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-241P-201ENST00000391148 104 ntBASIC1.93□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-1190P-201ENST00000410811 104 ntBASIC1.93□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-177P-201ENST00000411257 104 ntBASIC1.93□□□□□ -2.1
SHCBP1Q8NEM2 AL022718.1-201ENST00000412004 84 ntBASIC1.93□□□□□ -2.1
SHCBP1Q8NEM2 RPL31P63-201ENST00000422565 375 ntBASIC1.93□□□□□ -2.1
SHCBP1Q8NEM2 RNU7-67P-201ENST00000459003 62 ntBASIC1.93□□□□□ -2.1
SHCBP1Q8NEM2 AC004812.1-201ENST00000540773 146 ntBASIC1.93□□□□□ -2.1
SHCBP1Q8NEM2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.93□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-766P-201ENST00000362478 107 ntBASIC1.92□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-756P-201ENST00000383997 107 ntBASIC1.92□□□□□ -2.1
SHCBP1Q8NEM2 MIR499A-201ENST00000384903 122 ntBASIC1.92□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-913P-201ENST00000390913 95 ntBASIC1.92□□□□□ -2.1
SHCBP1Q8NEM2 SNORA26.6-201ENST00000391256 115 ntBASIC1.92□□□□□ -2.1
SHCBP1Q8NEM2 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.92□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-917P-201ENST00000516294 104 ntBASIC1.92□□□□□ -2.1
SHCBP1Q8NEM2 RNU7-53P-201ENST00000516705 60 ntBASIC1.92□□□□□ -2.1
SHCBP1Q8NEM2 RNU7-6P-201ENST00000516845 62 ntBASIC1.92□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-1258P-201ENST00000516911 111 ntBASIC1.92□□□□□ -2.1
SHCBP1Q8NEM2 AC068339.1-201ENST00000526965 141 ntBASIC1.92□□□□□ -2.1
SHCBP1Q8NEM2 AC022254.1-201ENST00000567857 235 ntBASIC1.92□□□□□ -2.1
SHCBP1Q8NEM2 MIR5009-201ENST00000578736 100 ntBASIC1.92□□□□□ -2.1
SHCBP1Q8NEM2 MIR4791-201ENST00000607666 84 ntBASIC1.92□□□□□ -2.1
SHCBP1Q8NEM2 AL512598.1-201ENST00000610158 273 ntBASIC1.92□□□□□ -2.1
SHCBP1Q8NEM2 AC243994.1-201ENST00000618627 109 ntBASIC1.92□□□□□ -2.1
SHCBP1Q8NEM2 AC106754.2-201ENST00000623006 233 ntBASIC1.92□□□□□ -2.1
SHCBP1Q8NEM2 AC095038.3-201ENST00000634439 195 ntBASIC1.92□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-1123P-201ENST00000362347 106 ntBASIC1.91□□□□□ -2.1
SHCBP1Q8NEM2 Y_RNA.171-201ENST00000363760 102 ntBASIC1.91□□□□□ -2.1
SHCBP1Q8NEM2 SNORA51.5-201ENST00000384126 131 ntBASIC1.91□□□□□ -2.1
SHCBP1Q8NEM2 Y_RNA.531-201ENST00000384589 121 ntBASIC1.91□□□□□ -2.1
SHCBP1Q8NEM2 MIR194-1-201ENST00000384892 85 ntBASIC1.91□□□□□ -2.1
SHCBP1Q8NEM2 MIR1302-5-201ENST00000408164 150 ntBASIC1.91□□□□□ -2.1
SHCBP1Q8NEM2 RNA5SP489-201ENST00000410986 109 ntBASIC1.91□□□□□ -2.1
SHCBP1Q8NEM2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.91□□□□□ -2.1
SHCBP1Q8NEM2 RPS23P4-201ENST00000487908 423 ntBASIC1.91□□□□□ -2.1
SHCBP1Q8NEM2 SNORA74.3-201ENST00000517108 154 ntBASIC1.91□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-537P-201ENST00000517277 103 ntBASIC1.91□□□□□ -2.1
SHCBP1Q8NEM2 MIR6841-201ENST00000637129 72 ntBASIC1.91□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-1255P-201ENST00000363434 112 ntBASIC1.9□□□□□ -2.11
SHCBP1Q8NEM2 RNU7-73P-201ENST00000458743 63 ntBASIC1.9□□□□□ -2.11
SHCBP1Q8NEM2 RNU7-95P-201ENST00000459222 64 ntBASIC1.9□□□□□ -2.11
SHCBP1Q8NEM2 RNA5SP57-201ENST00000459463 123 ntBASIC1.9□□□□□ -2.11
SHCBP1Q8NEM2 Y_RNA.677-201ENST00000516401 85 ntBASIC1.9□□□□□ -2.11
SHCBP1Q8NEM2 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.9□□□□□ -2.11
SHCBP1Q8NEM2 MIR3618-201ENST00000580330 88 ntBASIC1.9□□□□□ -2.11
SHCBP1Q8NEM2 MIR4713-201ENST00000582691 75 ntBASIC1.9□□□□□ -2.11
SHCBP1Q8NEM2 AC087741.2-201ENST00000619415 172 ntBASIC1.9□□□□□ -2.11
SHCBP1Q8NEM2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.89□□□□□ -2.11
SHCBP1Q8NEM2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SHCBP1Q8NEM2 SNORA22.1-201ENST00000362701 134 ntBASIC1.89□□□□□ -2.11
SHCBP1Q8NEM2 SNORA25.9-201ENST00000365087 128 ntBASIC1.89□□□□□ -2.11
SHCBP1Q8NEM2 Y_RNA.537-201ENST00000384626 109 ntBASIC1.89□□□□□ -2.11
SHCBP1Q8NEM2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.89□□□□□ -2.11
SHCBP1Q8NEM2 AL513534.2-201ENST00000603836 250 ntBASIC1.89□□□□□ -2.11
SHCBP1Q8NEM2 AL020996.3-201ENST00000606617 222 ntBASIC1.89□□□□□ -2.11
SHCBP1Q8NEM2 MIR6717-201ENST00000622747 73 ntBASIC1.89□□□□□ -2.11
SHCBP1Q8NEM2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.89□□□□□ -2.11
SHCBP1Q8NEM2 AL162726.3-218ENST00000636401 95 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms