Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AP003733.2-201ENST00000529409 171 ntBASIC-0.43□□□□□ -2.48
ZNF439Q8NDP4 DEFB131E-201ENST00000532329 154 ntBASIC-0.43□□□□□ -2.48
ZNF439Q8NDP4 MIR4724-201ENST00000579485 89 ntBASIC-0.43□□□□□ -2.48
ZNF439Q8NDP4 AL121655.1-201ENST00000605811 308 ntBASIC-0.43□□□□□ -2.48
ZNF439Q8NDP4 U7.6-201ENST00000610841 64 ntBASIC-0.43□□□□□ -2.48
ZNF439Q8NDP4 PART1_1.1-201ENST00000611761 217 ntBASIC-0.43□□□□□ -2.48
ZNF439Q8NDP4 AC084782.3-201ENST00000612282 578 ntBASIC-0.43□□□□□ -2.48
ZNF439Q8NDP4 AC091932.4-201ENST00000623386 200 ntBASIC-0.43□□□□□ -2.48
ZNF439Q8NDP4 AL162726.3-218ENST00000636401 95 ntBASIC-0.43□□□□□ -2.48
ZNF439Q8NDP4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 MIR148A-201ENST00000362215 68 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 MIR367-201ENST00000362299 68 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 SNORD114-28-201ENST00000363610 72 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 RNU4-24P-201ENST00000364565 139 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 U8.6-201ENST00000364939 135 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 RNU6-102P-201ENST00000384485 104 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 RNA5SP261-201ENST00000410536 106 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 PMCHL1-202ENST00000423102 261 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 SEPT14P8-201ENST00000508026 178 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 RNA5SP285-201ENST00000516619 119 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 AC026407.1-201ENST00000518369 204 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 IGLVI-20-201ENST00000519296 130 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 NAMPTP3-201ENST00000569273 224 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 C8orf59P2-201ENST00000603441 271 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 AL360085.1-201ENST00000604713 532 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 AC104985.2-201ENST00000620598 500 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 AC084368.1-201ENST00000620935 65 ntBASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.44□□□□□ -2.48
ZNF439Q8NDP4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 RNU6-845P-201ENST00000362578 103 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 SNORA22.1-201ENST00000362701 134 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 RNU6-484P-201ENST00000384016 107 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 SNORD116-2-201ENST00000384274 95 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 RNU6-480P-201ENST00000384332 107 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 SNORD116-6-201ENST00000384711 96 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 SNORD110-201ENST00000408189 75 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 AC114755.3-201ENST00000481111 251 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 RNU7-79P-201ENST00000516082 62 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 RNU6-720P-201ENST00000516363 108 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 RNU6-358P-201ENST00000516564 75 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 MIR4645-201ENST00000583158 77 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 AL356055.1-201ENST00000602528 446 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 SNORD113-5-201ENST00000607261 78 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 SNORD58B-201ENST00000607313 66 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 U4.5-201ENST00000617137 123 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 AC105081.1-201ENST00000617727 106 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 U6.109-201ENST00000636749 87 ntBASIC-0.45□□□□□ -2.48
ZNF439Q8NDP4 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.46□□□□□ -2.48
ZNF439Q8NDP4 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.46□□□□□ -2.48
ZNF439Q8NDP4 RNU4-58P-201ENST00000363192 141 ntBASIC-0.46□□□□□ -2.48
ZNF439Q8NDP4 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.46□□□□□ -2.48
ZNF439Q8NDP4 RNY1P2-201ENST00000364820 117 ntBASIC-0.46□□□□□ -2.48
ZNF439Q8NDP4 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.46□□□□□ -2.48
ZNF439Q8NDP4 MIR626-201ENST00000385032 94 ntBASIC-0.46□□□□□ -2.48
ZNF439Q8NDP4 MIR516B1-201ENST00000385211 90 ntBASIC-0.46□□□□□ -2.48
ZNF439Q8NDP4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.46□□□□□ -2.48
ZNF439Q8NDP4 MIR1277-201ENST00000408536 78 ntBASIC-0.46□□□□□ -2.48
ZNF439Q8NDP4 RNU6-284P-201ENST00000411105 106 ntBASIC-0.46□□□□□ -2.48
ZNF439Q8NDP4 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.46□□□□□ -2.48
ZNF439Q8NDP4 AL589823.1-201ENST00000429577 183 ntBASIC-0.46□□□□□ -2.48
ZNF439Q8NDP4 HSPE1P25-201ENST00000455484 251 ntBASIC-0.46□□□□□ -2.48
ZNF439Q8NDP4 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.46□□□□□ -2.48
ZNF439Q8NDP4 RNU6-507P-201ENST00000516045 100 ntBASIC-0.46□□□□□ -2.48
ZNF439Q8NDP4 AC007485.1-201ENST00000616755 206 ntBASIC-0.46□□□□□ -2.48
ZNF439Q8NDP4 AC021613.1-201ENST00000623880 111 ntBASIC-0.46□□□□□ -2.48
ZNF439Q8NDP4 MTND4LP32-201ENST00000636111 270 ntBASIC-0.46□□□□□ -2.48
ZNF439Q8NDP4 MIR6759-201ENST00000638110 65 ntBASIC-0.46□□□□□ -2.48
ZNF439Q8NDP4 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.47□□□□□ -2.48
ZNF439Q8NDP4 SNORD113-8-201ENST00000363497 74 ntBASIC-0.47□□□□□ -2.48
ZNF439Q8NDP4 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.47□□□□□ -2.48
ZNF439Q8NDP4 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.47□□□□□ -2.48
ZNF439Q8NDP4 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.47□□□□□ -2.48
ZNF439Q8NDP4 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.47□□□□□ -2.48
ZNF439Q8NDP4 SNORD81.2-201ENST00000365153 76 ntBASIC-0.47□□□□□ -2.48
ZNF439Q8NDP4 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.47□□□□□ -2.48
ZNF439Q8NDP4 AC016907.1-201ENST00000419483 435 ntBASIC-0.47□□□□□ -2.48
ZNF439Q8NDP4 AC006210.1-201ENST00000424882 111 ntBASIC-0.47□□□□□ -2.48
ZNF439Q8NDP4 SNRPGP8-201ENST00000454064 226 ntBASIC-0.47□□□□□ -2.48
ZNF439Q8NDP4 U8.20-201ENST00000459445 131 ntBASIC-0.47□□□□□ -2.48
ZNF439Q8NDP4 SNORA25.13-201ENST00000516395 103 ntBASIC-0.47□□□□□ -2.48
ZNF439Q8NDP4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.47□□□□□ -2.48
ZNF439Q8NDP4 AL008718.3-201ENST00000610217 321 ntBASIC-0.47□□□□□ -2.48
ZNF439Q8NDP4 MIR548AZ-201ENST00000616567 95 ntBASIC-0.47□□□□□ -2.48
ZNF439Q8NDP4 AC073869.9-201ENST00000641610 120 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms