Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 Y_RNA.78-201ENST00000362970 110 ntBASIC2.23□□□□□ -2.05
LINC00116Q8NCU8 Y_RNA.299-201ENST00000364973 94 ntBASIC2.23□□□□□ -2.05
LINC00116Q8NCU8 RNU6-1067P-201ENST00000384752 107 ntBASIC2.23□□□□□ -2.05
LINC00116Q8NCU8 RNA5SP261-201ENST00000410536 106 ntBASIC2.23□□□□□ -2.05
LINC00116Q8NCU8 AC079804.2-201ENST00000490376 200 ntBASIC2.23□□□□□ -2.05
LINC00116Q8NCU8 RNU6-1258P-201ENST00000516911 111 ntBASIC2.23□□□□□ -2.05
LINC00116Q8NCU8 FO624990.1-201ENST00000636373 85 ntBASIC2.23□□□□□ -2.05
LINC00116Q8NCU8 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC00116Q8NCU8 AC005336.3-201ENST00000623833 2679 ntBASIC2.23□□□□□ -2.05
LINC00116Q8NCU8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LINC00116Q8NCU8 SNORA24-201ENST00000384096 131 ntBASIC2.22□□□□□ -2.05
LINC00116Q8NCU8 Y_RNA.507-201ENST00000384500 99 ntBASIC2.22□□□□□ -2.05
LINC00116Q8NCU8 RNU6-913P-201ENST00000390913 95 ntBASIC2.22□□□□□ -2.05
LINC00116Q8NCU8 RNU4-69P-201ENST00000410677 143 ntBASIC2.22□□□□□ -2.05
LINC00116Q8NCU8 RNU6-1190P-201ENST00000410811 104 ntBASIC2.22□□□□□ -2.05
LINC00116Q8NCU8 RNA5SP57-201ENST00000459463 123 ntBASIC2.22□□□□□ -2.05
LINC00116Q8NCU8 AC113410.1-201ENST00000505029 247 ntBASIC2.22□□□□□ -2.05
LINC00116Q8NCU8 RNA5SP33-201ENST00000516687 98 ntBASIC2.22□□□□□ -2.05
LINC00116Q8NCU8 MIR3618-201ENST00000580330 88 ntBASIC2.22□□□□□ -2.05
LINC00116Q8NCU8 MIR502-201ENST00000606349 86 ntBASIC2.22□□□□□ -2.05
LINC00116Q8NCU8 Y_RNA.773-201ENST00000607168 90 ntBASIC2.22□□□□□ -2.05
LINC00116Q8NCU8 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
LINC00116Q8NCU8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.22□□□□□ -2.05
LINC00116Q8NCU8 MIR203B-201ENST00000636080 86 ntBASIC2.22□□□□□ -2.05
LINC00116Q8NCU8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.22□□□□□ -2.05
LINC00116Q8NCU8 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
LINC00116Q8NCU8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
LINC00116Q8NCU8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
LINC00116Q8NCU8 Y_RNA.155-201ENST00000363632 101 ntBASIC2.21□□□□□ -2.06
LINC00116Q8NCU8 RNU6-1131P-201ENST00000364955 107 ntBASIC2.21□□□□□ -2.06
LINC00116Q8NCU8 RNU6-360P-201ENST00000390944 104 ntBASIC2.21□□□□□ -2.06
LINC00116Q8NCU8 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.21□□□□□ -2.06
LINC00116Q8NCU8 RPL23AP6-201ENST00000446637 472 ntBASIC2.21□□□□□ -2.06
LINC00116Q8NCU8 RNU6-904P-201ENST00000516206 101 ntBASIC2.21□□□□□ -2.06
LINC00116Q8NCU8 AL645939.4-201ENST00000604495 135 ntBASIC2.21□□□□□ -2.06
LINC00116Q8NCU8 AL049779.4-201ENST00000604500 156 ntBASIC2.21□□□□□ -2.06
LINC00116Q8NCU8 AL020996.3-201ENST00000606617 222 ntBASIC2.21□□□□□ -2.06
LINC00116Q8NCU8 Y_RNA.818-201ENST00000618813 71 ntBASIC2.21□□□□□ -2.06
LINC00116Q8NCU8 MIR6717-201ENST00000622747 73 ntBASIC2.21□□□□□ -2.06
LINC00116Q8NCU8 MIR1255B1-201ENST00000636325 63 ntBASIC2.21□□□□□ -2.06
LINC00116Q8NCU8 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.21□□□□□ -2.06
LINC00116Q8NCU8 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC00116Q8NCU8 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
LINC00116Q8NCU8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LINC00116Q8NCU8 Y_RNA.470-201ENST00000384307 117 ntBASIC2.2□□□□□ -2.06
LINC00116Q8NCU8 Y_RNA.537-201ENST00000384626 109 ntBASIC2.2□□□□□ -2.06
LINC00116Q8NCU8 SNORA26.6-201ENST00000391256 115 ntBASIC2.2□□□□□ -2.06
LINC00116Q8NCU8 AC245517.4-201ENST00000448601 281 ntBASIC2.2□□□□□ -2.06
LINC00116Q8NCU8 RNU7-73P-201ENST00000458743 63 ntBASIC2.2□□□□□ -2.06
LINC00116Q8NCU8 RNU6-717P-201ENST00000459076 104 ntBASIC2.2□□□□□ -2.06
LINC00116Q8NCU8 SNORA74.3-201ENST00000517108 154 ntBASIC2.2□□□□□ -2.06
LINC00116Q8NCU8 DEFB131E-201ENST00000532329 154 ntBASIC2.2□□□□□ -2.06
LINC00116Q8NCU8 MIR4446-201ENST00000578505 67 ntBASIC2.2□□□□□ -2.06
LINC00116Q8NCU8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LINC00116Q8NCU8 SNORD115-19-201ENST00000363098 82 ntBASIC2.19□□□□□ -2.06
LINC00116Q8NCU8 SNORD115-18-201ENST00000363293 82 ntBASIC2.19□□□□□ -2.06
LINC00116Q8NCU8 RNU4-36P-201ENST00000364294 144 ntBASIC2.19□□□□□ -2.06
LINC00116Q8NCU8 SNORA16.1-201ENST00000364597 132 ntBASIC2.19□□□□□ -2.06
LINC00116Q8NCU8 SNORD115-17-201ENST00000364612 82 ntBASIC2.19□□□□□ -2.06
LINC00116Q8NCU8 SNORA31.11-201ENST00000516528 139 ntBASIC2.19□□□□□ -2.06
LINC00116Q8NCU8 MIR548AE2-201ENST00000583456 67 ntBASIC2.19□□□□□ -2.06
LINC00116Q8NCU8 FAM71BP1-201ENST00000604431 523 ntBASIC2.19□□□□□ -2.06
LINC00116Q8NCU8 AL512598.1-201ENST00000610158 273 ntBASIC2.19□□□□□ -2.06
LINC00116Q8NCU8 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.19□□□□□ -2.06
LINC00116Q8NCU8 MIR6841-201ENST00000637129 72 ntBASIC2.19□□□□□ -2.06
LINC00116Q8NCU8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
LINC00116Q8NCU8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.18□□□□□ -2.06
LINC00116Q8NCU8 SNORD115-2-201ENST00000362842 82 ntBASIC2.18□□□□□ -2.06
LINC00116Q8NCU8 RNU6-363P-201ENST00000362895 105 ntBASIC2.18□□□□□ -2.06
LINC00116Q8NCU8 RNU6-294P-201ENST00000364999 102 ntBASIC2.18□□□□□ -2.06
LINC00116Q8NCU8 SNORD115-20-201ENST00000365099 82 ntBASIC2.18□□□□□ -2.06
LINC00116Q8NCU8 RNU6-203P-201ENST00000384038 104 ntBASIC2.18□□□□□ -2.06
LINC00116Q8NCU8 RNU6-409P-201ENST00000384114 104 ntBASIC2.18□□□□□ -2.06
LINC00116Q8NCU8 SNORD77B-201ENST00000391112 67 ntBASIC2.18□□□□□ -2.06
LINC00116Q8NCU8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LINC00116Q8NCU8 RNU6-1123P-201ENST00000362347 106 ntBASIC2.17□□□□□ -2.06
LINC00116Q8NCU8 RNY3P2-201ENST00000362918 102 ntBASIC2.17□□□□□ -2.06
LINC00116Q8NCU8 RNU4-67P-201ENST00000364569 141 ntBASIC2.17□□□□□ -2.06
LINC00116Q8NCU8 Y_RNA.430-201ENST00000384081 110 ntBASIC2.17□□□□□ -2.06
LINC00116Q8NCU8 RNA5SP338-201ENST00000410495 85 ntBASIC2.17□□□□□ -2.06
LINC00116Q8NCU8 RNU6-733P-201ENST00000410759 104 ntBASIC2.17□□□□□ -2.06
LINC00116Q8NCU8 HMGN1P33-201ENST00000432945 451 ntBASIC2.17□□□□□ -2.06
LINC00116Q8NCU8 RNU1-40P-201ENST00000516816 164 ntBASIC2.17□□□□□ -2.06
LINC00116Q8NCU8 RNU1-97P-201ENST00000516872 164 ntBASIC2.17□□□□□ -2.06
LINC00116Q8NCU8 SNORA32-201ENST00000384072 121 ntBASIC2.16□□□□□ -2.06
LINC00116Q8NCU8 RNU6-49P-201ENST00000384256 107 ntBASIC2.16□□□□□ -2.06
LINC00116Q8NCU8 RNU6-616P-201ENST00000384353 107 ntBASIC2.16□□□□□ -2.06
LINC00116Q8NCU8 SNORA7.5-201ENST00000410672 110 ntBASIC2.16□□□□□ -2.06
LINC00116Q8NCU8 AC004965.1-201ENST00000413033 213 ntBASIC2.16□□□□□ -2.06
LINC00116Q8NCU8 RPS3AP1-201ENST00000413190 320 ntBASIC2.16□□□□□ -2.06
LINC00116Q8NCU8 MTATP8P2-201ENST00000435212 202 ntBASIC2.16□□□□□ -2.06
LINC00116Q8NCU8 snoU13.16-201ENST00000459350 104 ntBASIC2.16□□□□□ -2.06
LINC00116Q8NCU8 RNU6-917P-201ENST00000516294 104 ntBASIC2.16□□□□□ -2.06
LINC00116Q8NCU8 RNU2-19P-201ENST00000517288 84 ntBASIC2.16□□□□□ -2.06
LINC00116Q8NCU8 MIR2052-201ENST00000636055 55 ntBASIC2.16□□□□□ -2.06
LINC00116Q8NCU8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.07
LINC00116Q8NCU8 RNA5SP276-201ENST00000362580 94 ntBASIC2.15□□□□□ -2.07
LINC00116Q8NCU8 Y_RNA.107-201ENST00000363190 121 ntBASIC2.15□□□□□ -2.07
LINC00116Q8NCU8 RNU6-1099P-201ENST00000363533 107 ntBASIC2.15□□□□□ -2.07
LINC00116Q8NCU8 SNORA1.1-201ENST00000364671 133 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms