Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 MIR1257-201ENST00000408490 117 ntBASIC0.48□□□□□ -2.33
CCDC197Q8NCU1 RNA5SP261-201ENST00000410536 106 ntBASIC0.48□□□□□ -2.33
CCDC197Q8NCU1 AL121914.1-201ENST00000450188 156 ntBASIC0.48□□□□□ -2.33
CCDC197Q8NCU1 MTND1P19-201ENST00000511780 315 ntBASIC0.48□□□□□ -2.33
CCDC197Q8NCU1 SNORD116-25-201ENST00000516517 92 ntBASIC0.48□□□□□ -2.33
CCDC197Q8NCU1 AC008608.1-201ENST00000603910 127 ntBASIC0.48□□□□□ -2.33
CCDC197Q8NCU1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
CCDC197Q8NCU1 MIR373-201ENST00000362273 69 ntBASIC0.47□□□□□ -2.33
CCDC197Q8NCU1 Y_RNA.20-201ENST00000362479 113 ntBASIC0.47□□□□□ -2.33
CCDC197Q8NCU1 Y_RNA.269-201ENST00000364685 89 ntBASIC0.47□□□□□ -2.33
CCDC197Q8NCU1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
CCDC197Q8NCU1 RNU6-493P-201ENST00000391321 108 ntBASIC0.47□□□□□ -2.33
CCDC197Q8NCU1 RNU6-321P-201ENST00000410912 106 ntBASIC0.47□□□□□ -2.33
CCDC197Q8NCU1 MTND2P23-201ENST00000422990 651 ntBASIC0.47□□□□□ -2.33
CCDC197Q8NCU1 RNU6-237P-201ENST00000515985 71 ntBASIC0.47□□□□□ -2.33
CCDC197Q8NCU1 RNU6-327P-201ENST00000516270 127 ntBASIC0.47□□□□□ -2.33
CCDC197Q8NCU1 MIR378D2-201ENST00000580636 98 ntBASIC0.47□□□□□ -2.33
CCDC197Q8NCU1 AC090897.1-201ENST00000580909 226 ntBASIC0.47□□□□□ -2.33
CCDC197Q8NCU1 SNORD92-201ENST00000585078 85 ntBASIC0.47□□□□□ -2.33
CCDC197Q8NCU1 RNU2-4P-201ENST00000606190 192 ntBASIC0.47□□□□□ -2.33
CCDC197Q8NCU1 Y_RNA.121-201ENST00000363309 113 ntBASIC0.46□□□□□ -2.34
CCDC197Q8NCU1 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
CCDC197Q8NCU1 SNORD27-201ENST00000363981 72 ntBASIC0.46□□□□□ -2.34
CCDC197Q8NCU1 Y_RNA.238-201ENST00000364441 102 ntBASIC0.46□□□□□ -2.34
CCDC197Q8NCU1 RNU6-597P-201ENST00000365620 102 ntBASIC0.46□□□□□ -2.34
CCDC197Q8NCU1 SNORD100-201ENST00000408573 76 ntBASIC0.46□□□□□ -2.34
CCDC197Q8NCU1 RNU7-102P-201ENST00000458948 62 ntBASIC0.46□□□□□ -2.34
CCDC197Q8NCU1 SCARNA15.1-201ENST00000516384 125 ntBASIC0.46□□□□□ -2.34
CCDC197Q8NCU1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
CCDC197Q8NCU1 MIR6841-201ENST00000637129 72 ntBASIC0.46□□□□□ -2.34
CCDC197Q8NCU1 AL596211.1-201ENST00000569873 2277 ntBASIC0.46□□□□□ -2.34
CCDC197Q8NCU1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.45□□□□□ -2.34
CCDC197Q8NCU1 Y_RNA.350-201ENST00000365409 98 ntBASIC0.45□□□□□ -2.34
CCDC197Q8NCU1 RNU6-364P-201ENST00000384387 107 ntBASIC0.45□□□□□ -2.34
CCDC197Q8NCU1 MIR1302-3-201ENST00000408128 138 ntBASIC0.45□□□□□ -2.34
CCDC197Q8NCU1 Y_RNA.626-201ENST00000411288 95 ntBASIC0.45□□□□□ -2.34
CCDC197Q8NCU1 SEPT7P4-201ENST00000437076 306 ntBASIC0.45□□□□□ -2.34
CCDC197Q8NCU1 RN7SKP12-201ENST00000516275 143 ntBASIC0.45□□□□□ -2.34
CCDC197Q8NCU1 SCARNA15-202ENST00000516881 127 ntBASIC0.45□□□□□ -2.34
CCDC197Q8NCU1 RNU7-156P-201ENST00000517214 74 ntBASIC0.45□□□□□ -2.34
CCDC197Q8NCU1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.45□□□□□ -2.34
CCDC197Q8NCU1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.45□□□□□ -2.34
CCDC197Q8NCU1 MIR4308-201ENST00000580634 81 ntBASIC0.45□□□□□ -2.34
CCDC197Q8NCU1 AL662814.1-201ENST00000617364 121 ntBASIC0.45□□□□□ -2.34
CCDC197Q8NCU1 Y_RNA.477-201ENST00000384352 108 ntBASIC0.44□□□□□ -2.34
CCDC197Q8NCU1 MIR624-201ENST00000385217 97 ntBASIC0.44□□□□□ -2.34
CCDC197Q8NCU1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.44□□□□□ -2.34
CCDC197Q8NCU1 RNA5SP127-201ENST00000411051 133 ntBASIC0.44□□□□□ -2.34
CCDC197Q8NCU1 Y_RNA.673-201ENST00000516306 88 ntBASIC0.44□□□□□ -2.34
CCDC197Q8NCU1 RNA5SP102-201ENST00000516865 106 ntBASIC0.44□□□□□ -2.34
CCDC197Q8NCU1 Z83818.1-201ENST00000603584 150 ntBASIC0.44□□□□□ -2.34
CCDC197Q8NCU1 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.44□□□□□ -2.34
CCDC197Q8NCU1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.44□□□□□ -2.34
CCDC197Q8NCU1 Y_RNA.65-201ENST00000362846 100 ntBASIC0.43□□□□□ -2.34
CCDC197Q8NCU1 RNU6-923P-201ENST00000364753 107 ntBASIC0.43□□□□□ -2.34
CCDC197Q8NCU1 RNU6-643P-201ENST00000384018 107 ntBASIC0.43□□□□□ -2.34
CCDC197Q8NCU1 Y_RNA.571-201ENST00000384753 98 ntBASIC0.43□□□□□ -2.34
CCDC197Q8NCU1 RNU6-447P-201ENST00000410293 104 ntBASIC0.43□□□□□ -2.34
CCDC197Q8NCU1 RNU6-1118P-201ENST00000410382 104 ntBASIC0.43□□□□□ -2.34
CCDC197Q8NCU1 RNU6-1076P-201ENST00000410397 104 ntBASIC0.43□□□□□ -2.34
CCDC197Q8NCU1 RNU6-355P-201ENST00000410427 104 ntBASIC0.43□□□□□ -2.34
CCDC197Q8NCU1 RNU6-791P-201ENST00000410467 104 ntBASIC0.43□□□□□ -2.34
CCDC197Q8NCU1 RNU6-705P-201ENST00000410601 104 ntBASIC0.43□□□□□ -2.34
CCDC197Q8NCU1 RNU6-1100P-201ENST00000410691 104 ntBASIC0.43□□□□□ -2.34
CCDC197Q8NCU1 RNU6-860P-201ENST00000410860 104 ntBASIC0.43□□□□□ -2.34
CCDC197Q8NCU1 RNU6-1217P-201ENST00000411276 104 ntBASIC0.43□□□□□ -2.34
CCDC197Q8NCU1 RNU6-785P-201ENST00000411324 104 ntBASIC0.43□□□□□ -2.34
CCDC197Q8NCU1 Y_RNA.797-201ENST00000515977 94 ntBASIC0.43□□□□□ -2.34
CCDC197Q8NCU1 MIR3152-201ENST00000579801 74 ntBASIC0.43□□□□□ -2.34
CCDC197Q8NCU1 U6.90-201ENST00000614007 104 ntBASIC0.43□□□□□ -2.34
CCDC197Q8NCU1 U6.70-201ENST00000620287 104 ntBASIC0.43□□□□□ -2.34
CCDC197Q8NCU1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
CCDC197Q8NCU1 RNU1-133P-201ENST00000364867 167 ntBASIC0.42□□□□□ -2.34
CCDC197Q8NCU1 RNU6-275P-201ENST00000364910 107 ntBASIC0.42□□□□□ -2.34
CCDC197Q8NCU1 Y_RNA.478-201ENST00000384358 107 ntBASIC0.42□□□□□ -2.34
CCDC197Q8NCU1 AC002350.1-201ENST00000490759 375 ntBASIC0.42□□□□□ -2.34
CCDC197Q8NCU1 RNU6-1045P-201ENST00000516321 107 ntBASIC0.42□□□□□ -2.34
CCDC197Q8NCU1 Y_RNA.680-201ENST00000516441 93 ntBASIC0.42□□□□□ -2.34
CCDC197Q8NCU1 SNORA4-201ENST00000584302 138 ntBASIC0.42□□□□□ -2.34
CCDC197Q8NCU1 AL162730.1-201ENST00000605734 292 ntBASIC0.42□□□□□ -2.34
CCDC197Q8NCU1 AC062037.2-201ENST00000610137 73 ntBASIC0.42□□□□□ -2.34
CCDC197Q8NCU1 AC021613.1-201ENST00000623880 111 ntBASIC0.42□□□□□ -2.34
CCDC197Q8NCU1 MIR5087-201ENST00000635826 76 ntBASIC0.42□□□□□ -2.34
CCDC197Q8NCU1 Y_RNA.182-201ENST00000363880 111 ntBASIC0.41□□□□□ -2.34
CCDC197Q8NCU1 SNORA20-201ENST00000384662 132 ntBASIC0.41□□□□□ -2.34
CCDC197Q8NCU1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.41□□□□□ -2.34
CCDC197Q8NCU1 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
CCDC197Q8NCU1 RNU7-70P-201ENST00000516941 66 ntBASIC0.41□□□□□ -2.34
CCDC197Q8NCU1 MIR3128-201ENST00000581957 66 ntBASIC0.41□□□□□ -2.34
CCDC197Q8NCU1 Y_RNA.42-201ENST00000362660 108 ntBASIC0.4□□□□□ -2.35
CCDC197Q8NCU1 SNORA22.1-201ENST00000362701 134 ntBASIC0.4□□□□□ -2.35
CCDC197Q8NCU1 Y_RNA.162-201ENST00000363683 102 ntBASIC0.4□□□□□ -2.35
CCDC197Q8NCU1 RNU6-342P-201ENST00000384521 104 ntBASIC0.4□□□□□ -2.35
CCDC197Q8NCU1 RNU4-70P-201ENST00000384579 139 ntBASIC0.4□□□□□ -2.35
CCDC197Q8NCU1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.4□□□□□ -2.35
CCDC197Q8NCU1 RNA5SP237-201ENST00000410414 113 ntBASIC0.4□□□□□ -2.35
CCDC197Q8NCU1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.4□□□□□ -2.35
CCDC197Q8NCU1 RNU6-1023P-201ENST00000516137 106 ntBASIC0.4□□□□□ -2.35
CCDC197Q8NCU1 RNU4-71P-201ENST00000516258 113 ntBASIC0.4□□□□□ -2.35
CCDC197Q8NCU1 RNU6-1149P-201ENST00000516810 97 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 397.6 ms