Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 FAM71BP1-201ENST00000604431 523 ntBASIC0.89□□□□□ -2.27
RTL3Q8N8U3 AC098479.1-201ENST00000609225 154 ntBASIC0.89□□□□□ -2.27
RTL3Q8N8U3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
RTL3Q8N8U3 MIR103A2-201ENST00000362154 78 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 SNORA25.3-201ENST00000363205 127 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 SNORA25.7-201ENST00000364375 127 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 RNU6-886P-201ENST00000384319 105 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.555-201ENST00000384673 110 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 RNU6-907P-201ENST00000390924 102 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 RNU6-394P-201ENST00000410735 107 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 RPS3AP1-201ENST00000413190 320 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 SNORA4-201ENST00000584302 138 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 MIR8055-201ENST00000610739 97 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 SEPT14P17-201ENST00000617978 177 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.87□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.272-201ENST00000364696 102 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 MT-TN-201ENST00000387400 73 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 RNU6-913P-201ENST00000390913 95 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.580-201ENST00000391004 95 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 RNU6-613P-201ENST00000410412 108 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 AL035398.1-201ENST00000430869 322 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 FABP5P4-201ENST00000437203 171 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.87□□□□□ -2.27
RTL3Q8N8U3 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 RNU7-53P-201ENST00000516705 60 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 MIR4698-201ENST00000577795 80 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 Z97988.1-201ENST00000637697 135 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 RNU6-1082P-201ENST00000364574 107 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 SNORD114-22-201ENST00000365423 72 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.357-201ENST00000365487 109 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 SNORA75.5-201ENST00000391291 81 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.86□□□□□ -2.27
RTL3Q8N8U3 RNU7-67P-201ENST00000459003 62 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 RNA5SP236-201ENST00000516169 116 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 RNU6-958P-201ENST00000516995 106 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 DNAJC19P2-201ENST00000593340 302 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 MIR6734-201ENST00000621166 68 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 AC091932.4-201ENST00000623386 200 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 MIR6516-201ENST00000630554 81 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 MIR377-201ENST00000362145 69 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.180-201ENST00000363867 113 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 RNU6-1336P-201ENST00000383886 109 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.521-201ENST00000384560 114 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 MIR608-201ENST00000384820 100 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 SNORA26.6-201ENST00000391256 115 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 MIR548I3-201ENST00000408378 149 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 RNU2-11P-201ENST00000459191 187 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 RNU7-80P-201ENST00000459562 61 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 AC013244.2-201ENST00000603396 103 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.52-201ENST00000362760 96 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.150-201ENST00000363562 102 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 RNU6-580P-201ENST00000365159 107 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.351-201ENST00000365436 96 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.454-201ENST00000384224 113 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 RNU6-125P-201ENST00000384505 107 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 AC090844.1-201ENST00000422019 156 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 MIR2115-201ENST00000516657 100 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 RNU6-1149P-201ENST00000516810 97 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 RNU6-1212P-201ENST00000517023 104 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.84□□□□□ -2.27
RTL3Q8N8U3 AC131055.1-201ENST00000584626 316 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 MIR3658-201ENST00000636291 56 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 MTND5P32-201ENST00000560711 1802 ntBASIC0.83□□□□□ -2.28
RTL3Q8N8U3 RNU6-654P-201ENST00000364373 107 ntBASIC0.83□□□□□ -2.28
RTL3Q8N8U3 Y_RNA.251-201ENST00000364551 99 ntBASIC0.83□□□□□ -2.28
RTL3Q8N8U3 RNU6-396P-201ENST00000365369 105 ntBASIC0.83□□□□□ -2.28
RTL3Q8N8U3 Y_RNA.497-201ENST00000384447 98 ntBASIC0.83□□□□□ -2.28
RTL3Q8N8U3 MIR548I1-201ENST00000408810 149 ntBASIC0.83□□□□□ -2.28
RTL3Q8N8U3 RNA5SP255-201ENST00000516370 107 ntBASIC0.83□□□□□ -2.28
RTL3Q8N8U3 MIR3668-201ENST00000582138 75 ntBASIC0.83□□□□□ -2.28
RTL3Q8N8U3 MIR6844-201ENST00000637122 62 ntBASIC0.83□□□□□ -2.28
RTL3Q8N8U3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.82□□□□□ -2.28
RTL3Q8N8U3 Y_RNA.270-201ENST00000364693 104 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 RNU6-818P-201ENST00000364837 108 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 Y_RNA.430-201ENST00000384081 110 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 Y_RNA.464-201ENST00000384282 110 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 MIR489-201ENST00000384923 84 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 RNU6-588P-201ENST00000410281 105 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 RNU6-1190P-201ENST00000410811 104 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 RNU6-602P-201ENST00000411155 105 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 AC244023.1-201ENST00000426884 112 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 RNU7-197P-201ENST00000458836 62 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 RNU2-60P-201ENST00000517290 128 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 AC036111.3-201ENST00000526389 112 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 MIR4264-201ENST00000583520 66 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 AC242498.1-201ENST00000604134 111 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 AC106800.4-201ENST00000614905 153 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 MIR6841-201ENST00000637129 72 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
RTL3Q8N8U3 Y_RNA.168-201ENST00000363740 102 ntBASIC0.81□□□□□ -2.28
RTL3Q8N8U3 RNY1P11-201ENST00000363759 113 ntBASIC0.81□□□□□ -2.28
RTL3Q8N8U3 MIR520E-201ENST00000384867 87 ntBASIC0.81□□□□□ -2.28
RTL3Q8N8U3 RNU6-1319P-201ENST00000390855 104 ntBASIC0.81□□□□□ -2.28
RTL3Q8N8U3 RNU6-747P-201ENST00000390928 104 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms