Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 RN7SKP179-201ENST00000516126 217 ntBASIC1.26□□□□□ -2.21
CCDC33Q8N5R6 AC131055.1-201ENST00000584626 316 ntBASIC1.26□□□□□ -2.21
CCDC33Q8N5R6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
CCDC33Q8N5R6 MTND5P32-201ENST00000560711 1802 ntBASIC1.25□□□□□ -2.21
CCDC33Q8N5R6 MIR302B-201ENST00000362188 73 ntBASIC1.25□□□□□ -2.21
CCDC33Q8N5R6 Y_RNA.150-201ENST00000363562 102 ntBASIC1.25□□□□□ -2.21
CCDC33Q8N5R6 SNORA1.1-201ENST00000364671 133 ntBASIC1.25□□□□□ -2.21
CCDC33Q8N5R6 Y_RNA.580-201ENST00000391004 95 ntBASIC1.25□□□□□ -2.21
CCDC33Q8N5R6 SNORA26.6-201ENST00000391256 115 ntBASIC1.25□□□□□ -2.21
CCDC33Q8N5R6 RNU6-394P-201ENST00000410735 107 ntBASIC1.25□□□□□ -2.21
CCDC33Q8N5R6 RNU6-1190P-201ENST00000410811 104 ntBASIC1.25□□□□□ -2.21
CCDC33Q8N5R6 HMGN1P33-201ENST00000432945 451 ntBASIC1.25□□□□□ -2.21
CCDC33Q8N5R6 RNA5SP220-201ENST00000516298 104 ntBASIC1.25□□□□□ -2.21
CCDC33Q8N5R6 MIR3668-201ENST00000582138 75 ntBASIC1.25□□□□□ -2.21
CCDC33Q8N5R6 MIR4264-201ENST00000583520 66 ntBASIC1.25□□□□□ -2.21
CCDC33Q8N5R6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC33Q8N5R6 RNU1-133P-201ENST00000364867 167 ntBASIC1.24□□□□□ -2.21
CCDC33Q8N5R6 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.24□□□□□ -2.21
CCDC33Q8N5R6 AC036111.3-201ENST00000526389 112 ntBASIC1.24□□□□□ -2.21
CCDC33Q8N5R6 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.24□□□□□ -2.21
CCDC33Q8N5R6 AC106800.4-201ENST00000614905 153 ntBASIC1.24□□□□□ -2.21
CCDC33Q8N5R6 AL596211.1-201ENST00000569873 2277 ntBASIC1.24□□□□□ -2.21
CCDC33Q8N5R6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CCDC33Q8N5R6 Y_RNA.168-201ENST00000363740 102 ntBASIC1.23□□□□□ -2.21
CCDC33Q8N5R6 Y_RNA.497-201ENST00000384447 98 ntBASIC1.23□□□□□ -2.21
CCDC33Q8N5R6 RNU6-588P-201ENST00000410281 105 ntBASIC1.23□□□□□ -2.21
CCDC33Q8N5R6 RNA5SP261-201ENST00000410536 106 ntBASIC1.23□□□□□ -2.21
CCDC33Q8N5R6 RNU6-602P-201ENST00000411155 105 ntBASIC1.23□□□□□ -2.21
CCDC33Q8N5R6 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.23□□□□□ -2.21
CCDC33Q8N5R6 RNA5SP236-201ENST00000516169 116 ntBASIC1.23□□□□□ -2.21
CCDC33Q8N5R6 RNU7-70P-201ENST00000516941 66 ntBASIC1.23□□□□□ -2.21
CCDC33Q8N5R6 AP000753.3-201ENST00000604083 169 ntBASIC1.23□□□□□ -2.21
CCDC33Q8N5R6 RMST_2.1-201ENST00000617263 136 ntBASIC1.23□□□□□ -2.21
CCDC33Q8N5R6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CCDC33Q8N5R6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CCDC33Q8N5R6 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.23□□□□□ -2.21
CCDC33Q8N5R6 SNORD113.3-201ENST00000364630 78 ntBASIC1.22□□□□□ -2.21
CCDC33Q8N5R6 RNU6-580P-201ENST00000365159 107 ntBASIC1.22□□□□□ -2.21
CCDC33Q8N5R6 MIR520E-201ENST00000384867 87 ntBASIC1.22□□□□□ -2.21
CCDC33Q8N5R6 RNU6-907P-201ENST00000390924 102 ntBASIC1.22□□□□□ -2.21
CCDC33Q8N5R6 RNA5SP95-201ENST00000410319 137 ntBASIC1.22□□□□□ -2.21
CCDC33Q8N5R6 AC244023.1-201ENST00000426884 112 ntBASIC1.22□□□□□ -2.21
CCDC33Q8N5R6 RNU7-45P-201ENST00000459460 63 ntBASIC1.22□□□□□ -2.21
CCDC33Q8N5R6 AC023827.1-201ENST00000569247 97 ntBASIC1.22□□□□□ -2.21
CCDC33Q8N5R6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC33Q8N5R6 AC242498.1-201ENST00000604134 111 ntBASIC1.22□□□□□ -2.21
CCDC33Q8N5R6 MIR6717-201ENST00000622747 73 ntBASIC1.22□□□□□ -2.21
CCDC33Q8N5R6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC33Q8N5R6 RNU1-93P-201ENST00000364704 169 ntBASIC1.21□□□□□ -2.22
CCDC33Q8N5R6 SNORD38B-201ENST00000384690 67 ntBASIC1.21□□□□□ -2.22
CCDC33Q8N5R6 MIR200A-201ENST00000384875 90 ntBASIC1.21□□□□□ -2.22
CCDC33Q8N5R6 RNU6-1319P-201ENST00000390855 104 ntBASIC1.21□□□□□ -2.22
CCDC33Q8N5R6 RNU6-747P-201ENST00000390928 104 ntBASIC1.21□□□□□ -2.22
CCDC33Q8N5R6 SNORD37.2-201ENST00000391075 66 ntBASIC1.21□□□□□ -2.22
CCDC33Q8N5R6 RNU6-241P-201ENST00000391148 104 ntBASIC1.21□□□□□ -2.22
CCDC33Q8N5R6 SNORD111-201ENST00000408139 94 ntBASIC1.21□□□□□ -2.22
CCDC33Q8N5R6 RNU6-177P-201ENST00000411257 104 ntBASIC1.21□□□□□ -2.22
CCDC33Q8N5R6 RPS29P1-201ENST00000465274 159 ntBASIC1.21□□□□□ -2.22
CCDC33Q8N5R6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.21□□□□□ -2.22
CCDC33Q8N5R6 SNORD38B-202ENST00000625943 69 ntBASIC1.21□□□□□ -2.22
CCDC33Q8N5R6 Y_RNA.180-201ENST00000363867 113 ntBASIC1.2□□□□□ -2.22
CCDC33Q8N5R6 RNU6-449P-201ENST00000383914 107 ntBASIC1.2□□□□□ -2.22
CCDC33Q8N5R6 Y_RNA.430-201ENST00000384081 110 ntBASIC1.2□□□□□ -2.22
CCDC33Q8N5R6 SNORA2B-201ENST00000384583 137 ntBASIC1.2□□□□□ -2.22
CCDC33Q8N5R6 RPS3AP1-201ENST00000413190 320 ntBASIC1.2□□□□□ -2.22
CCDC33Q8N5R6 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC33Q8N5R6 MIR3144-201ENST00000579460 79 ntBASIC1.2□□□□□ -2.22
CCDC33Q8N5R6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC33Q8N5R6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.2□□□□□ -2.22
CCDC33Q8N5R6 MIR6841-201ENST00000637129 72 ntBASIC1.2□□□□□ -2.22
CCDC33Q8N5R6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CCDC33Q8N5R6 RNY1P11-201ENST00000363759 113 ntBASIC1.19□□□□□ -2.22
CCDC33Q8N5R6 Y_RNA.251-201ENST00000364551 99 ntBASIC1.19□□□□□ -2.22
CCDC33Q8N5R6 RNU4-11P-201ENST00000365287 132 ntBASIC1.19□□□□□ -2.22
CCDC33Q8N5R6 RNU6-1130P-201ENST00000365434 107 ntBASIC1.19□□□□□ -2.22
CCDC33Q8N5R6 RNU6-205P-201ENST00000390858 107 ntBASIC1.19□□□□□ -2.22
CCDC33Q8N5R6 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
CCDC33Q8N5R6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC33Q8N5R6 SNORD124-201ENST00000459577 104 ntBASIC1.19□□□□□ -2.22
CCDC33Q8N5R6 OR2A41P-201ENST00000473586 105 ntBASIC1.19□□□□□ -2.22
CCDC33Q8N5R6 RNU2-60P-201ENST00000517290 128 ntBASIC1.19□□□□□ -2.22
CCDC33Q8N5R6 AC112693.2-201ENST00000556538 232 ntBASIC1.19□□□□□ -2.22
CCDC33Q8N5R6 MIR4295-201ENST00000585286 85 ntBASIC1.19□□□□□ -2.22
CCDC33Q8N5R6 HSPE1P19-201ENST00000603327 295 ntBASIC1.19□□□□□ -2.22
CCDC33Q8N5R6 AC104465.1-201ENST00000611365 139 ntBASIC1.19□□□□□ -2.22
CCDC33Q8N5R6 Y_RNA.778-201ENST00000620203 90 ntBASIC1.19□□□□□ -2.22
CCDC33Q8N5R6 AC021613.1-201ENST00000623880 111 ntBASIC1.19□□□□□ -2.22
CCDC33Q8N5R6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
CCDC33Q8N5R6 AL391516.1-201ENST00000554380 2449 ntBASIC1.18□□□□□ -2.22
CCDC33Q8N5R6 SNORD116-18-201ENST00000383961 92 ntBASIC1.18□□□□□ -2.22
CCDC33Q8N5R6 RNU6-804P-201ENST00000384286 107 ntBASIC1.18□□□□□ -2.22
CCDC33Q8N5R6 AC087343.1-201ENST00000477341 475 ntBASIC1.18□□□□□ -2.22
CCDC33Q8N5R6 SNORD114-24-201ENST00000365029 72 ntBASIC1.17□□□□□ -2.22
CCDC33Q8N5R6 RNY1P6-201ENST00000384193 109 ntBASIC1.17□□□□□ -2.22
CCDC33Q8N5R6 MIR3152-201ENST00000579801 74 ntBASIC1.17□□□□□ -2.22
CCDC33Q8N5R6 RNU6-94P-201ENST00000607728 107 ntBASIC1.17□□□□□ -2.22
CCDC33Q8N5R6 MIR6767-201ENST00000637302 66 ntBASIC1.17□□□□□ -2.22
CCDC33Q8N5R6 RNU6-151P-201ENST00000364158 107 ntBASIC1.16□□□□□ -2.22
CCDC33Q8N5R6 Y_RNA.354-201ENST00000365448 111 ntBASIC1.16□□□□□ -2.22
CCDC33Q8N5R6 Y_RNA.464-201ENST00000384282 110 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 263 ms