Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 SNORD38B-201ENST00000384690 67 ntBASIC1.03□□□□□ -2.24
BEST3Q8N1M1 SNORD37.2-201ENST00000391075 66 ntBASIC1.03□□□□□ -2.24
BEST3Q8N1M1 RPS23P4-201ENST00000487908 423 ntBASIC1.03□□□□□ -2.24
BEST3Q8N1M1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.03□□□□□ -2.24
BEST3Q8N1M1 MIR4452-201ENST00000583004 71 ntBASIC1.03□□□□□ -2.24
BEST3Q8N1M1 AP000753.3-201ENST00000604083 169 ntBASIC1.03□□□□□ -2.24
BEST3Q8N1M1 SNORD38B-202ENST00000625943 69 ntBASIC1.03□□□□□ -2.24
BEST3Q8N1M1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.02□□□□□ -2.25
BEST3Q8N1M1 Y_RNA.555-201ENST00000384673 110 ntBASIC1.02□□□□□ -2.25
BEST3Q8N1M1 MTND5P32-201ENST00000560711 1802 ntBASIC1.02□□□□□ -2.25
BEST3Q8N1M1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.02□□□□□ -2.25
BEST3Q8N1M1 MIR3152-201ENST00000579801 74 ntBASIC1.02□□□□□ -2.25
BEST3Q8N1M1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
BEST3Q8N1M1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
BEST3Q8N1M1 MIR377-201ENST00000362145 69 ntBASIC1.01□□□□□ -2.25
BEST3Q8N1M1 Y_RNA.52-201ENST00000362760 96 ntBASIC1.01□□□□□ -2.25
BEST3Q8N1M1 Y_RNA.150-201ENST00000363562 102 ntBASIC1.01□□□□□ -2.25
BEST3Q8N1M1 RNU6-654P-201ENST00000364373 107 ntBASIC1.01□□□□□ -2.25
BEST3Q8N1M1 SNORD113.3-201ENST00000364630 78 ntBASIC1.01□□□□□ -2.25
BEST3Q8N1M1 RNU6-125P-201ENST00000384505 107 ntBASIC1.01□□□□□ -2.25
BEST3Q8N1M1 Y_RNA.580-201ENST00000391004 95 ntBASIC1.01□□□□□ -2.25
BEST3Q8N1M1 SNORD111-201ENST00000408139 94 ntBASIC1.01□□□□□ -2.25
BEST3Q8N1M1 RNU6-588P-201ENST00000410281 105 ntBASIC1.01□□□□□ -2.25
BEST3Q8N1M1 RNU6-394P-201ENST00000410735 107 ntBASIC1.01□□□□□ -2.25
BEST3Q8N1M1 AC090844.1-201ENST00000422019 156 ntBASIC1.01□□□□□ -2.25
BEST3Q8N1M1 AC036111.3-201ENST00000526389 112 ntBASIC1.01□□□□□ -2.25
BEST3Q8N1M1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.01□□□□□ -2.25
BEST3Q8N1M1 MIR4264-201ENST00000583520 66 ntBASIC1.01□□□□□ -2.25
BEST3Q8N1M1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.01□□□□□ -2.25
BEST3Q8N1M1 AC106800.4-201ENST00000614905 153 ntBASIC1.01□□□□□ -2.25
BEST3Q8N1M1 Y_RNA.116-201ENST00000363292 103 ntBASIC1□□□□□ -2.25
BEST3Q8N1M1 Y_RNA.354-201ENST00000365448 111 ntBASIC1□□□□□ -2.25
BEST3Q8N1M1 RNU6-449P-201ENST00000383914 107 ntBASIC1□□□□□ -2.25
BEST3Q8N1M1 MIR200A-201ENST00000384875 90 ntBASIC1□□□□□ -2.25
BEST3Q8N1M1 RNU6-1319P-201ENST00000390855 104 ntBASIC1□□□□□ -2.25
BEST3Q8N1M1 RNU6-747P-201ENST00000390928 104 ntBASIC1□□□□□ -2.25
BEST3Q8N1M1 RNU6-241P-201ENST00000391148 104 ntBASIC1□□□□□ -2.25
BEST3Q8N1M1 PCNPP3-201ENST00000393579 471 ntBASIC1□□□□□ -2.25
BEST3Q8N1M1 RNU6-177P-201ENST00000411257 104 ntBASIC1□□□□□ -2.25
BEST3Q8N1M1 RPS3AP1-201ENST00000413190 320 ntBASIC1□□□□□ -2.25
BEST3Q8N1M1 HMGN1P33-201ENST00000432945 451 ntBASIC1□□□□□ -2.25
BEST3Q8N1M1 MTATP6P21-201ENST00000440681 189 ntBASIC1□□□□□ -2.25
BEST3Q8N1M1 RPS29P28-201ENST00000446439 141 ntBASIC1□□□□□ -2.25
BEST3Q8N1M1 AC023827.1-201ENST00000569247 97 ntBASIC1□□□□□ -2.25
BEST3Q8N1M1 MIR6717-201ENST00000622747 73 ntBASIC1□□□□□ -2.25
BEST3Q8N1M1 MIR3658-201ENST00000636291 56 ntBASIC1□□□□□ -2.25
BEST3Q8N1M1 Y_RNA.168-201ENST00000363740 102 ntBASIC0.99□□□□□ -2.25
BEST3Q8N1M1 Y_RNA.497-201ENST00000384447 98 ntBASIC0.99□□□□□ -2.25
BEST3Q8N1M1 SNORA2B-201ENST00000384583 137 ntBASIC0.99□□□□□ -2.25
BEST3Q8N1M1 SNORA20-201ENST00000384662 132 ntBASIC0.99□□□□□ -2.25
BEST3Q8N1M1 SNORA26.6-201ENST00000391256 115 ntBASIC0.99□□□□□ -2.25
BEST3Q8N1M1 RNU6-1190P-201ENST00000410811 104 ntBASIC0.99□□□□□ -2.25
BEST3Q8N1M1 RNU6-602P-201ENST00000411155 105 ntBASIC0.99□□□□□ -2.25
BEST3Q8N1M1 AC244023.1-201ENST00000426884 112 ntBASIC0.99□□□□□ -2.25
BEST3Q8N1M1 AC242498.1-201ENST00000604134 111 ntBASIC0.99□□□□□ -2.25
BEST3Q8N1M1 AC104465.1-201ENST00000611365 139 ntBASIC0.99□□□□□ -2.25
BEST3Q8N1M1 RNU1-93P-201ENST00000364704 169 ntBASIC0.98□□□□□ -2.25
BEST3Q8N1M1 RNU6-580P-201ENST00000365159 107 ntBASIC0.98□□□□□ -2.25
BEST3Q8N1M1 Y_RNA.430-201ENST00000384081 110 ntBASIC0.98□□□□□ -2.25
BEST3Q8N1M1 RNA5SP95-201ENST00000410319 137 ntBASIC0.98□□□□□ -2.25
BEST3Q8N1M1 RNU7-45P-201ENST00000459460 63 ntBASIC0.98□□□□□ -2.25
BEST3Q8N1M1 Y_RNA.778-201ENST00000620203 90 ntBASIC0.98□□□□□ -2.25
BEST3Q8N1M1 Y_RNA.180-201ENST00000363867 113 ntBASIC0.97□□□□□ -2.25
BEST3Q8N1M1 RNU6-151P-201ENST00000364158 107 ntBASIC0.97□□□□□ -2.25
BEST3Q8N1M1 SNORD114-24-201ENST00000365029 72 ntBASIC0.97□□□□□ -2.25
BEST3Q8N1M1 SNORD18B-201ENST00000365659 72 ntBASIC0.97□□□□□ -2.25
BEST3Q8N1M1 Y_RNA.508-201ENST00000384502 114 ntBASIC0.97□□□□□ -2.25
BEST3Q8N1M1 MIR518E-201ENST00000385252 88 ntBASIC0.97□□□□□ -2.25
BEST3Q8N1M1 Y_RNA.584-201ENST00000391090 114 ntBASIC0.97□□□□□ -2.25
BEST3Q8N1M1 FABP5P4-201ENST00000437203 171 ntBASIC0.97□□□□□ -2.25
BEST3Q8N1M1 RNU6-893P-201ENST00000458841 100 ntBASIC0.97□□□□□ -2.25
BEST3Q8N1M1 RNA5SP236-201ENST00000516169 116 ntBASIC0.97□□□□□ -2.25
BEST3Q8N1M1 AC112693.2-201ENST00000556538 232 ntBASIC0.97□□□□□ -2.25
BEST3Q8N1M1 MIR3144-201ENST00000579460 79 ntBASIC0.97□□□□□ -2.25
BEST3Q8N1M1 SNORD114-21-201ENST00000606412 72 ntBASIC0.97□□□□□ -2.25
BEST3Q8N1M1 AC021613.1-201ENST00000623880 111 ntBASIC0.97□□□□□ -2.25
BEST3Q8N1M1 MIR6767-201ENST00000637302 66 ntBASIC0.97□□□□□ -2.25
BEST3Q8N1M1 RNU4-11P-201ENST00000365287 132 ntBASIC0.96□□□□□ -2.26
BEST3Q8N1M1 Y_RNA.355-201ENST00000365462 98 ntBASIC0.96□□□□□ -2.26
BEST3Q8N1M1 SNORA22-201ENST00000383907 134 ntBASIC0.96□□□□□ -2.26
BEST3Q8N1M1 SNORD116-18-201ENST00000383961 92 ntBASIC0.96□□□□□ -2.26
BEST3Q8N1M1 RNY1P6-201ENST00000384193 109 ntBASIC0.96□□□□□ -2.26
BEST3Q8N1M1 SNORA22C-201ENST00000384614 134 ntBASIC0.96□□□□□ -2.26
BEST3Q8N1M1 RNU6-205P-201ENST00000390858 107 ntBASIC0.96□□□□□ -2.26
BEST3Q8N1M1 RNU6-907P-201ENST00000390924 102 ntBASIC0.96□□□□□ -2.26
BEST3Q8N1M1 SNORD124-201ENST00000459577 104 ntBASIC0.96□□□□□ -2.26
BEST3Q8N1M1 OR2A41P-201ENST00000473586 105 ntBASIC0.96□□□□□ -2.26
BEST3Q8N1M1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.96□□□□□ -2.26
BEST3Q8N1M1 RNU6-1130P-201ENST00000365434 107 ntBASIC0.95□□□□□ -2.26
BEST3Q8N1M1 Y_RNA.464-201ENST00000384282 110 ntBASIC0.95□□□□□ -2.26
BEST3Q8N1M1 RNU6-804P-201ENST00000384286 107 ntBASIC0.95□□□□□ -2.26
BEST3Q8N1M1 MIR520E-201ENST00000384867 87 ntBASIC0.95□□□□□ -2.26
BEST3Q8N1M1 MIR942-201ENST00000401111 86 ntBASIC0.95□□□□□ -2.26
BEST3Q8N1M1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.95□□□□□ -2.26
BEST3Q8N1M1 RNU7-62P-201ENST00000458856 62 ntBASIC0.95□□□□□ -2.26
BEST3Q8N1M1 AC011603.4-201ENST00000611325 277 ntBASIC0.95□□□□□ -2.26
BEST3Q8N1M1 AC012676.2-201ENST00000619258 186 ntBASIC0.95□□□□□ -2.26
BEST3Q8N1M1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
BEST3Q8N1M1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
BEST3Q8N1M1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 209 ms