Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 Y_RNA.455-201ENST00000384230 98 ntBASIC0.08□□□□□ -2.4
CCDC65Q8IXS2 SNORA26-201ENST00000391286 122 ntBASIC0.08□□□□□ -2.4
CCDC65Q8IXS2 SNORD93-201ENST00000408813 74 ntBASIC0.08□□□□□ -2.4
CCDC65Q8IXS2 RNU6-651P-201ENST00000411040 105 ntBASIC0.08□□□□□ -2.4
CCDC65Q8IXS2 Y_RNA.622-201ENST00000411091 108 ntBASIC0.08□□□□□ -2.4
CCDC65Q8IXS2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.08□□□□□ -2.4
CCDC65Q8IXS2 AP003327.1-201ENST00000529684 127 ntBASIC0.08□□□□□ -2.4
CCDC65Q8IXS2 MIR4315-1-201ENST00000636800 73 ntBASIC0.08□□□□□ -2.4
CCDC65Q8IXS2 MIR4315-2-201ENST00000640925 73 ntBASIC0.08□□□□□ -2.4
CCDC65Q8IXS2 Y_RNA.351-201ENST00000365436 96 ntBASIC0.07□□□□□ -2.4
CCDC65Q8IXS2 Y_RNA.432-201ENST00000384087 111 ntBASIC0.07□□□□□ -2.4
CCDC65Q8IXS2 Y_RNA.527-201ENST00000384573 102 ntBASIC0.07□□□□□ -2.4
CCDC65Q8IXS2 RNU6-1228P-201ENST00000391014 107 ntBASIC0.07□□□□□ -2.4
CCDC65Q8IXS2 RNU2-59P-201ENST00000410482 191 ntBASIC0.07□□□□□ -2.4
CCDC65Q8IXS2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.07□□□□□ -2.4
CCDC65Q8IXS2 Y_RNA.711-201ENST00000516993 102 ntBASIC0.07□□□□□ -2.4
CCDC65Q8IXS2 RNU6-988P-201ENST00000519081 107 ntBASIC0.07□□□□□ -2.4
CCDC65Q8IXS2 RN7SL793P-201ENST00000583259 296 ntBASIC0.07□□□□□ -2.4
CCDC65Q8IXS2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.07□□□□□ -2.4
CCDC65Q8IXS2 AL160413.1-201ENST00000622780 310 ntBASIC0.07□□□□□ -2.4
CCDC65Q8IXS2 MIR6828-201ENST00000636181 60 ntBASIC0.07□□□□□ -2.4
CCDC65Q8IXS2 Y_RNA.13-201ENST00000362403 112 ntBASIC0.06□□□□□ -2.4
CCDC65Q8IXS2 Y_RNA.138-201ENST00000363462 102 ntBASIC0.06□□□□□ -2.4
CCDC65Q8IXS2 Y_RNA.153-201ENST00000363615 91 ntBASIC0.06□□□□□ -2.4
CCDC65Q8IXS2 RNY1P4-201ENST00000384595 115 ntBASIC0.06□□□□□ -2.4
CCDC65Q8IXS2 RNU6-1203P-201ENST00000410703 110 ntBASIC0.06□□□□□ -2.4
CCDC65Q8IXS2 AC073261.1-201ENST00000429409 121 ntBASIC0.06□□□□□ -2.4
CCDC65Q8IXS2 SNORD2.1-201ENST00000458762 69 ntBASIC0.06□□□□□ -2.4
CCDC65Q8IXS2 RNU6-1137P-201ENST00000517073 99 ntBASIC0.06□□□□□ -2.4
CCDC65Q8IXS2 AC112693.2-201ENST00000556538 232 ntBASIC0.06□□□□□ -2.4
CCDC65Q8IXS2 MIR4514-201ENST00000581410 57 ntBASIC0.06□□□□□ -2.4
CCDC65Q8IXS2 MIR6755-201ENST00000619993 66 ntBASIC0.06□□□□□ -2.4
CCDC65Q8IXS2 AC091932.4-201ENST00000623386 200 ntBASIC0.06□□□□□ -2.4
CCDC65Q8IXS2 MIR6841-201ENST00000637129 72 ntBASIC0.06□□□□□ -2.4
CCDC65Q8IXS2 Y_RNA.32-201ENST00000362589 110 ntBASIC0.05□□□□□ -2.4
CCDC65Q8IXS2 Y_RNA.128-201ENST00000363391 112 ntBASIC0.05□□□□□ -2.4
CCDC65Q8IXS2 Y_RNA.216-201ENST00000364205 93 ntBASIC0.05□□□□□ -2.4
CCDC65Q8IXS2 AL606845.1-201ENST00000404881 255 ntBASIC0.05□□□□□ -2.4
CCDC65Q8IXS2 AL512326.2-201ENST00000426359 151 ntBASIC0.05□□□□□ -2.4
CCDC65Q8IXS2 MTATP6P23-201ENST00000440153 476 ntBASIC0.05□□□□□ -2.4
CCDC65Q8IXS2 AC069271.1-201ENST00000445577 156 ntBASIC0.05□□□□□ -2.4
CCDC65Q8IXS2 RNA5SP268-201ENST00000516828 124 ntBASIC0.05□□□□□ -2.4
CCDC65Q8IXS2 SCARNA24.2-201ENST00000516968 130 ntBASIC0.05□□□□□ -2.4
CCDC65Q8IXS2 MIR4680-201ENST00000580906 66 ntBASIC0.05□□□□□ -2.4
CCDC65Q8IXS2 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.05□□□□□ -2.4
CCDC65Q8IXS2 MIR5197-201ENST00000583721 112 ntBASIC0.05□□□□□ -2.4
CCDC65Q8IXS2 MIR7107-201ENST00000611489 80 ntBASIC0.05□□□□□ -2.4
CCDC65Q8IXS2 MIR6082-201ENST00000613604 109 ntBASIC0.05□□□□□ -2.4
CCDC65Q8IXS2 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.05□□□□□ -2.4
CCDC65Q8IXS2 SNORA42.1-201ENST00000363515 137 ntBASIC0.04□□□□□ -2.4
CCDC65Q8IXS2 RNU4-67P-201ENST00000364569 141 ntBASIC0.04□□□□□ -2.4
CCDC65Q8IXS2 MIR616-201ENST00000385293 97 ntBASIC0.04□□□□□ -2.4
CCDC65Q8IXS2 RNU6-1143P-201ENST00000516125 104 ntBASIC0.04□□□□□ -2.4
CCDC65Q8IXS2 RNU6-561P-201ENST00000516222 102 ntBASIC0.04□□□□□ -2.4
CCDC65Q8IXS2 SNORA31.14-201ENST00000516728 116 ntBASIC0.04□□□□□ -2.4
CCDC65Q8IXS2 AC141846.1-201ENST00000568348 142 ntBASIC0.04□□□□□ -2.4
CCDC65Q8IXS2 MIR4491-201ENST00000581087 68 ntBASIC0.04□□□□□ -2.4
CCDC65Q8IXS2 MIR3129-201ENST00000581095 76 ntBASIC0.04□□□□□ -2.4
CCDC65Q8IXS2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.04□□□□□ -2.4
CCDC65Q8IXS2 AC134503.1-201ENST00000633048 54 ntBASIC0.04□□□□□ -2.4
CCDC65Q8IXS2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
CCDC65Q8IXS2 MIR302B-201ENST00000362188 73 ntBASIC0.03□□□□□ -2.4
CCDC65Q8IXS2 SNORD114-9-201ENST00000364370 72 ntBASIC0.03□□□□□ -2.4
CCDC65Q8IXS2 Y_RNA.393-201ENST00000383936 102 ntBASIC0.03□□□□□ -2.4
CCDC65Q8IXS2 MIR193B-201ENST00000384907 83 ntBASIC0.03□□□□□ -2.4
CCDC65Q8IXS2 AC022028.1-201ENST00000412054 408 ntBASIC0.03□□□□□ -2.4
CCDC65Q8IXS2 MIR6718-201ENST00000616153 80 ntBASIC0.03□□□□□ -2.4
CCDC65Q8IXS2 Y_RNA.82-201ENST00000363000 102 ntBASIC0.02□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.92-201ENST00000363043 102 ntBASIC0.02□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.235-201ENST00000364412 102 ntBASIC0.02□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.306-201ENST00000365015 102 ntBASIC0.02□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.312-201ENST00000365089 102 ntBASIC0.02□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.322-201ENST00000365151 102 ntBASIC0.02□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.476-201ENST00000384347 108 ntBASIC0.02□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.542-201ENST00000384641 111 ntBASIC0.02□□□□□ -2.41
CCDC65Q8IXS2 MIR613-201ENST00000385248 95 ntBASIC0.02□□□□□ -2.41
CCDC65Q8IXS2 RNA5SP261-201ENST00000410536 106 ntBASIC0.02□□□□□ -2.41
CCDC65Q8IXS2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.02□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.650-201ENST00000459002 102 ntBASIC0.02□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.673-201ENST00000516306 88 ntBASIC0.02□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.777-201ENST00000516982 102 ntBASIC0.02□□□□□ -2.41
CCDC65Q8IXS2 RNA5SP47-201ENST00000517230 109 ntBASIC0.02□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.771-201ENST00000598668 102 ntBASIC0.02□□□□□ -2.41
CCDC65Q8IXS2 AC023932.2-201ENST00000603176 175 ntBASIC0.02□□□□□ -2.41
CCDC65Q8IXS2 AL442067.1-201ENST00000613261 223 ntBASIC0.02□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.789-201ENST00000622480 102 ntBASIC0.02□□□□□ -2.41
CCDC65Q8IXS2 RNU6-403P-201ENST00000363163 104 ntBASIC0.01□□□□□ -2.41
CCDC65Q8IXS2 RNU6-1292P-201ENST00000383856 107 ntBASIC0.01□□□□□ -2.41
CCDC65Q8IXS2 MIR548P-201ENST00000408336 84 ntBASIC0.01□□□□□ -2.41
CCDC65Q8IXS2 RNA5SP237-201ENST00000410414 113 ntBASIC0.01□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.618-201ENST00000410949 107 ntBASIC0.01□□□□□ -2.41
CCDC65Q8IXS2 RNU7-80P-201ENST00000459562 61 ntBASIC0.01□□□□□ -2.41
CCDC65Q8IXS2 RNU6-765P-201ENST00000516916 99 ntBASIC0.01□□□□□ -2.41
CCDC65Q8IXS2 AC020661.2-201ENST00000560114 134 ntBASIC0.01□□□□□ -2.41
CCDC65Q8IXS2 Y_RNA.44-201ENST00000362676 108 ntBASIC0□□□□□ -2.41
CCDC65Q8IXS2 RNA5SP214-201ENST00000363378 118 ntBASIC0□□□□□ -2.41
CCDC65Q8IXS2 RNU6-949P-201ENST00000384040 107 ntBASIC0□□□□□ -2.41
CCDC65Q8IXS2 RNU6-291P-201ENST00000384720 107 ntBASIC0□□□□□ -2.41
CCDC65Q8IXS2 RNU6-381P-201ENST00000391259 108 ntBASIC0□□□□□ -2.41
CCDC65Q8IXS2 SCARNA16.5-201ENST00000517114 183 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms