Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 Y_RNA.812-201ENST00000610788 101 ntBASIC0.4□□□□□ -2.35
SKA3Q8IX90 Y_RNA.784-201ENST00000613803 101 ntBASIC0.4□□□□□ -2.35
SKA3Q8IX90 AC022709.1-201ENST00000615967 87 ntBASIC0.4□□□□□ -2.35
SKA3Q8IX90 Y_RNA.787-201ENST00000616522 101 ntBASIC0.4□□□□□ -2.35
SKA3Q8IX90 Y_RNA.780-201ENST00000617336 101 ntBASIC0.4□□□□□ -2.35
SKA3Q8IX90 Y_RNA.801-201ENST00000619005 101 ntBASIC0.4□□□□□ -2.35
SKA3Q8IX90 MIR6513-201ENST00000621188 64 ntBASIC0.4□□□□□ -2.35
SKA3Q8IX90 AC091932.4-201ENST00000623386 200 ntBASIC0.4□□□□□ -2.35
SKA3Q8IX90 Y_RNA.145-201ENST00000363527 102 ntBASIC0.39□□□□□ -2.35
SKA3Q8IX90 Y_RNA.277-201ENST00000364754 102 ntBASIC0.39□□□□□ -2.35
SKA3Q8IX90 Y_RNA.354-201ENST00000365448 111 ntBASIC0.39□□□□□ -2.35
SKA3Q8IX90 RNU4-45P-201ENST00000365469 141 ntBASIC0.39□□□□□ -2.35
SKA3Q8IX90 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
SKA3Q8IX90 RNU6-364P-201ENST00000384387 107 ntBASIC0.39□□□□□ -2.35
SKA3Q8IX90 MT-TF-201ENST00000387314 71 ntBASIC0.39□□□□□ -2.35
SKA3Q8IX90 SNORA26.6-201ENST00000391256 115 ntBASIC0.39□□□□□ -2.35
SKA3Q8IX90 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.39□□□□□ -2.35
SKA3Q8IX90 RNU7-102P-201ENST00000458948 62 ntBASIC0.39□□□□□ -2.35
SKA3Q8IX90 RNU6-1132P-201ENST00000459214 107 ntBASIC0.39□□□□□ -2.35
SKA3Q8IX90 AL365205.2-201ENST00000594586 68 ntBASIC0.39□□□□□ -2.35
SKA3Q8IX90 AC008737.2-201ENST00000599446 118 ntBASIC0.39□□□□□ -2.35
SKA3Q8IX90 AC008608.1-201ENST00000603910 127 ntBASIC0.39□□□□□ -2.35
SKA3Q8IX90 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.39□□□□□ -2.35
SKA3Q8IX90 MIR6717-201ENST00000622747 73 ntBASIC0.39□□□□□ -2.35
SKA3Q8IX90 AL596211.1-201ENST00000569873 2277 ntBASIC0.39□□□□□ -2.35
SKA3Q8IX90 MIR30D-201ENST00000362283 70 ntBASIC0.38□□□□□ -2.35
SKA3Q8IX90 Y_RNA.149-201ENST00000363558 117 ntBASIC0.38□□□□□ -2.35
SKA3Q8IX90 RNU6-103P-201ENST00000363686 107 ntBASIC0.38□□□□□ -2.35
SKA3Q8IX90 Y_RNA.351-201ENST00000365436 96 ntBASIC0.38□□□□□ -2.35
SKA3Q8IX90 MIR125B2-201ENST00000385128 89 ntBASIC0.38□□□□□ -2.35
SKA3Q8IX90 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.38□□□□□ -2.35
SKA3Q8IX90 AC011921.3-201ENST00000605540 361 ntBASIC0.38□□□□□ -2.35
SKA3Q8IX90 AL162730.1-201ENST00000605734 292 ntBASIC0.38□□□□□ -2.35
SKA3Q8IX90 Y_RNA.47-201ENST00000362697 108 ntBASIC0.37□□□□□ -2.35
SKA3Q8IX90 Y_RNA.76-201ENST00000362931 109 ntBASIC0.37□□□□□ -2.35
SKA3Q8IX90 MIR548H3-201ENST00000408771 118 ntBASIC0.37□□□□□ -2.35
SKA3Q8IX90 RNA5SP261-201ENST00000410536 106 ntBASIC0.37□□□□□ -2.35
SKA3Q8IX90 RNU4-43P-201ENST00000410628 137 ntBASIC0.37□□□□□ -2.35
SKA3Q8IX90 SNORA68.3-201ENST00000515906 83 ntBASIC0.37□□□□□ -2.35
SKA3Q8IX90 RNU7-156P-201ENST00000517214 74 ntBASIC0.37□□□□□ -2.35
SKA3Q8IX90 AC090897.1-201ENST00000580909 226 ntBASIC0.37□□□□□ -2.35
SKA3Q8IX90 Y_RNA.292-201ENST00000364904 97 ntBASIC0.36□□□□□ -2.35
SKA3Q8IX90 Y_RNA.308-201ENST00000365043 101 ntBASIC0.36□□□□□ -2.35
SKA3Q8IX90 RNU6-597P-201ENST00000365620 102 ntBASIC0.36□□□□□ -2.35
SKA3Q8IX90 Y_RNA.454-201ENST00000384224 113 ntBASIC0.36□□□□□ -2.35
SKA3Q8IX90 Y_RNA.459-201ENST00000384251 102 ntBASIC0.36□□□□□ -2.35
SKA3Q8IX90 RNU6-738P-201ENST00000384531 106 ntBASIC0.36□□□□□ -2.35
SKA3Q8IX90 MIR936-201ENST00000401264 98 ntBASIC0.36□□□□□ -2.35
SKA3Q8IX90 RNA5SP237-201ENST00000410414 113 ntBASIC0.36□□□□□ -2.35
SKA3Q8IX90 SEPT7P4-201ENST00000437076 306 ntBASIC0.36□□□□□ -2.35
SKA3Q8IX90 RPL39P25-201ENST00000449384 154 ntBASIC0.36□□□□□ -2.35
SKA3Q8IX90 AL121914.1-201ENST00000450188 156 ntBASIC0.36□□□□□ -2.35
SKA3Q8IX90 RNU7-80P-201ENST00000459562 61 ntBASIC0.36□□□□□ -2.35
SKA3Q8IX90 RN7SKP12-201ENST00000516275 143 ntBASIC0.36□□□□□ -2.35
SKA3Q8IX90 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
SKA3Q8IX90 Y_RNA.288-201ENST00000364854 92 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 RNU6-1292P-201ENST00000383856 107 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 RNU6-1319P-201ENST00000390855 104 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 RNU6-747P-201ENST00000390928 104 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 RNU6-241P-201ENST00000391148 104 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 SNORD100-201ENST00000408573 76 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 RNU6-447P-201ENST00000410293 104 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 RNU6-1118P-201ENST00000410382 104 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 RNU6-1076P-201ENST00000410397 104 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 RNU6-355P-201ENST00000410427 104 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 RNU6-791P-201ENST00000410467 104 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 RNU6-705P-201ENST00000410601 104 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 RNU6-1100P-201ENST00000410691 104 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 RNU6-860P-201ENST00000410860 104 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 RNU6-1217P-201ENST00000411276 104 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 RNU6-785P-201ENST00000411324 104 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.35□□□□□ -2.35
SKA3Q8IX90 RNY3P16-201ENST00000516338 101 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 MIR4744-201ENST00000581563 82 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 SNORD92-201ENST00000585078 85 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 U6.90-201ENST00000614007 104 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 AL662814.1-201ENST00000617364 121 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 U6.70-201ENST00000620287 104 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 AC243829.3-201ENST00000622177 108 ntBASIC0.35□□□□□ -2.35
SKA3Q8IX90 SNORA20-201ENST00000384662 132 ntBASIC0.34□□□□□ -2.36
SKA3Q8IX90 RNU6-493P-201ENST00000391321 108 ntBASIC0.34□□□□□ -2.36
SKA3Q8IX90 RNA5SP193-201ENST00000410353 107 ntBASIC0.34□□□□□ -2.36
SKA3Q8IX90 Y_RNA.618-201ENST00000410949 107 ntBASIC0.34□□□□□ -2.36
SKA3Q8IX90 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.34□□□□□ -2.36
SKA3Q8IX90 SNORD116-25-201ENST00000516517 92 ntBASIC0.34□□□□□ -2.36
SKA3Q8IX90 RNU7-70P-201ENST00000516941 66 ntBASIC0.34□□□□□ -2.36
SKA3Q8IX90 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.34□□□□□ -2.36
SKA3Q8IX90 MIR4711-201ENST00000578274 70 ntBASIC0.34□□□□□ -2.36
SKA3Q8IX90 AL360085.1-201ENST00000604713 532 ntBASIC0.34□□□□□ -2.36
SKA3Q8IX90 RNU2-4P-201ENST00000606190 192 ntBASIC0.34□□□□□ -2.36
SKA3Q8IX90 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.34□□□□□ -2.36
SKA3Q8IX90 AC092634.7-201ENST00000621022 103 ntBASIC0.34□□□□□ -2.36
SKA3Q8IX90 MIR5087-201ENST00000635826 76 ntBASIC0.34□□□□□ -2.36
SKA3Q8IX90 SNORD27-201ENST00000363981 72 ntBASIC0.33□□□□□ -2.36
SKA3Q8IX90 RNU6-978P-201ENST00000364371 103 ntBASIC0.33□□□□□ -2.36
SKA3Q8IX90 RNU6-342P-201ENST00000384521 104 ntBASIC0.33□□□□□ -2.36
SKA3Q8IX90 RNU6-1011P-201ENST00000384668 107 ntBASIC0.33□□□□□ -2.36
SKA3Q8IX90 Y_RNA.562-201ENST00000384695 113 ntBASIC0.33□□□□□ -2.36
SKA3Q8IX90 RNU6-578P-201ENST00000390980 103 ntBASIC0.33□□□□□ -2.36
SKA3Q8IX90 RNU4-83P-201ENST00000410863 133 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 211 ms