Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MIR8066-201ENST00000617280 78 ntBASIC0.13□□□□□ -2.39
CDKL3Q8IVW4 UBE2WP1-201ENST00000362030 340 ntBASIC0.12□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.210-201ENST00000364161 110 ntBASIC0.12□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.276-201ENST00000364732 109 ntBASIC0.12□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.634-201ENST00000364811 113 ntBASIC0.12□□□□□ -2.39
CDKL3Q8IVW4 MIR626-201ENST00000385032 94 ntBASIC0.12□□□□□ -2.39
CDKL3Q8IVW4 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
CDKL3Q8IVW4 SNORD93-201ENST00000408813 74 ntBASIC0.12□□□□□ -2.39
CDKL3Q8IVW4 RNU2-55P-201ENST00000411146 174 ntBASIC0.12□□□□□ -2.39
CDKL3Q8IVW4 RNU7-45P-201ENST00000459460 63 ntBASIC0.12□□□□□ -2.39
CDKL3Q8IVW4 AP001282.2-201ENST00000616149 309 ntBASIC0.12□□□□□ -2.39
CDKL3Q8IVW4 MIR6717-201ENST00000622747 73 ntBASIC0.12□□□□□ -2.39
CDKL3Q8IVW4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.12□□□□□ -2.39
CDKL3Q8IVW4 MIR302B-201ENST00000362188 73 ntBASIC0.11□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.42-201ENST00000362660 108 ntBASIC0.11□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.64-201ENST00000362845 102 ntBASIC0.11□□□□□ -2.39
CDKL3Q8IVW4 RNU6-484P-201ENST00000384016 107 ntBASIC0.11□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.432-201ENST00000384087 111 ntBASIC0.11□□□□□ -2.39
CDKL3Q8IVW4 RNU4-83P-201ENST00000410863 133 ntBASIC0.11□□□□□ -2.39
CDKL3Q8IVW4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.11□□□□□ -2.39
CDKL3Q8IVW4 MIR6755-201ENST00000619993 66 ntBASIC0.11□□□□□ -2.39
CDKL3Q8IVW4 MTND4P29-201ENST00000503122 1372 ntBASIC0.1□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.304-201ENST00000365011 112 ntBASIC0.1□□□□□ -2.39
CDKL3Q8IVW4 SNORA22B-201ENST00000383876 138 ntBASIC0.1□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.455-201ENST00000384230 98 ntBASIC0.1□□□□□ -2.39
CDKL3Q8IVW4 RNU6-1289P-201ENST00000384431 106 ntBASIC0.1□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.509-201ENST00000384506 99 ntBASIC0.1□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.527-201ENST00000384573 102 ntBASIC0.1□□□□□ -2.39
CDKL3Q8IVW4 MIR644A-201ENST00000385262 94 ntBASIC0.1□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.622-201ENST00000411091 108 ntBASIC0.1□□□□□ -2.39
CDKL3Q8IVW4 AC073261.1-201ENST00000429409 121 ntBASIC0.1□□□□□ -2.39
CDKL3Q8IVW4 RPL39P25-201ENST00000449384 154 ntBASIC0.1□□□□□ -2.39
CDKL3Q8IVW4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.1□□□□□ -2.39
CDKL3Q8IVW4 SERF1AP1-201ENST00000514575 187 ntBASIC0.1□□□□□ -2.39
CDKL3Q8IVW4 RNA5SP153-201ENST00000516498 76 ntBASIC0.1□□□□□ -2.39
CDKL3Q8IVW4 SCARNA24.2-201ENST00000516968 130 ntBASIC0.1□□□□□ -2.39
CDKL3Q8IVW4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.1□□□□□ -2.39
CDKL3Q8IVW4 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.1□□□□□ -2.39
CDKL3Q8IVW4 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.1□□□□□ -2.39
CDKL3Q8IVW4 AL160413.1-201ENST00000622780 310 ntBASIC0.1□□□□□ -2.39
CDKL3Q8IVW4 AC067863.3-201ENST00000624172 122 ntBASIC0.1□□□□□ -2.39
CDKL3Q8IVW4 Y_RNA.68-201ENST00000362881 102 ntBASIC0.09□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.84-201ENST00000363011 104 ntBASIC0.09□□□□□ -2.4
CDKL3Q8IVW4 RNU6-653P-201ENST00000363074 106 ntBASIC0.09□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.152-201ENST00000363578 100 ntBASIC0.09□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.351-201ENST00000365436 96 ntBASIC0.09□□□□□ -2.4
CDKL3Q8IVW4 MT-TT-201ENST00000387460 66 ntBASIC0.09□□□□□ -2.4
CDKL3Q8IVW4 RNA5SP237-201ENST00000410414 113 ntBASIC0.09□□□□□ -2.4
CDKL3Q8IVW4 RNA5SP261-201ENST00000410536 106 ntBASIC0.09□□□□□ -2.4
CDKL3Q8IVW4 SNRPGP8-201ENST00000454064 226 ntBASIC0.09□□□□□ -2.4
CDKL3Q8IVW4 MTND5P22-201ENST00000458380 195 ntBASIC0.09□□□□□ -2.4
CDKL3Q8IVW4 RNU6-1143P-201ENST00000516125 104 ntBASIC0.09□□□□□ -2.4
CDKL3Q8IVW4 AC069113.3-201ENST00000521019 150 ntBASIC0.09□□□□□ -2.4
CDKL3Q8IVW4 AC113195.1-201ENST00000579952 141 ntBASIC0.09□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.117-201ENST00000363294 101 ntBASIC0.08□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.128-201ENST00000363391 112 ntBASIC0.08□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.158-201ENST00000363651 101 ntBASIC0.08□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.275-201ENST00000364726 110 ntBASIC0.08□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.280-201ENST00000364765 112 ntBASIC0.08□□□□□ -2.4
CDKL3Q8IVW4 SNORA1-201ENST00000384107 130 ntBASIC0.08□□□□□ -2.4
CDKL3Q8IVW4 RNY3P5-201ENST00000384127 102 ntBASIC0.08□□□□□ -2.4
CDKL3Q8IVW4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.08□□□□□ -2.4
CDKL3Q8IVW4 RNU6-469P-201ENST00000516253 101 ntBASIC0.08□□□□□ -2.4
CDKL3Q8IVW4 RNU6-1338P-201ENST00000516328 91 ntBASIC0.08□□□□□ -2.4
CDKL3Q8IVW4 MIR5190-201ENST00000581537 80 ntBASIC0.08□□□□□ -2.4
CDKL3Q8IVW4 AC097639.2-201ENST00000603159 172 ntBASIC0.08□□□□□ -2.4
CDKL3Q8IVW4 AL662814.1-201ENST00000617364 121 ntBASIC0.08□□□□□ -2.4
CDKL3Q8IVW4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.08□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.23-201ENST00000362496 106 ntBASIC0.07□□□□□ -2.4
CDKL3Q8IVW4 RNU6-1228P-201ENST00000391014 107 ntBASIC0.07□□□□□ -2.4
CDKL3Q8IVW4 AL512326.2-201ENST00000426359 151 ntBASIC0.07□□□□□ -2.4
CDKL3Q8IVW4 MIR7107-201ENST00000611489 80 ntBASIC0.07□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.13-201ENST00000362403 112 ntBASIC0.06□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.32-201ENST00000362589 110 ntBASIC0.06□□□□□ -2.4
CDKL3Q8IVW4 RNU6-403P-201ENST00000363163 104 ntBASIC0.06□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.199-201ENST00000364014 102 ntBASIC0.06□□□□□ -2.4
CDKL3Q8IVW4 snoU2_19.4-201ENST00000364329 80 ntBASIC0.06□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.412-201ENST00000384001 104 ntBASIC0.06□□□□□ -2.4
CDKL3Q8IVW4 U8.15-201ENST00000390947 134 ntBASIC0.06□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.588-201ENST00000391254 102 ntBASIC0.06□□□□□ -2.4
CDKL3Q8IVW4 AL606845.1-201ENST00000404881 255 ntBASIC0.06□□□□□ -2.4
CDKL3Q8IVW4 RNU6-1203P-201ENST00000410703 110 ntBASIC0.06□□□□□ -2.4
CDKL3Q8IVW4 AC113618.1-201ENST00000416747 285 ntBASIC0.06□□□□□ -2.4
CDKL3Q8IVW4 RNU7-80P-201ENST00000459562 61 ntBASIC0.06□□□□□ -2.4
CDKL3Q8IVW4 RNU6-453P-201ENST00000516819 85 ntBASIC0.06□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.711-201ENST00000516993 102 ntBASIC0.06□□□□□ -2.4
CDKL3Q8IVW4 AC112693.2-201ENST00000556538 232 ntBASIC0.06□□□□□ -2.4
CDKL3Q8IVW4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.06□□□□□ -2.4
CDKL3Q8IVW4 AC134503.1-201ENST00000633048 54 ntBASIC0.06□□□□□ -2.4
CDKL3Q8IVW4 MIR4315-1-201ENST00000636800 73 ntBASIC0.06□□□□□ -2.4
CDKL3Q8IVW4 MIR4315-2-201ENST00000640925 73 ntBASIC0.06□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.44-201ENST00000362676 108 ntBASIC0.05□□□□□ -2.4
CDKL3Q8IVW4 RNU5E-4P-201ENST00000364931 120 ntBASIC0.05□□□□□ -2.4
CDKL3Q8IVW4 RNU6-187P-201ENST00000384139 106 ntBASIC0.05□□□□□ -2.4
CDKL3Q8IVW4 Y_RNA.460-201ENST00000384255 102 ntBASIC0.05□□□□□ -2.4
CDKL3Q8IVW4 MIR616-201ENST00000385293 97 ntBASIC0.05□□□□□ -2.4
CDKL3Q8IVW4 RNU2-59P-201ENST00000410482 191 ntBASIC0.05□□□□□ -2.4
CDKL3Q8IVW4 RNU6-651P-201ENST00000411040 105 ntBASIC0.05□□□□□ -2.4
CDKL3Q8IVW4 MTATP6P23-201ENST00000440153 476 ntBASIC0.05□□□□□ -2.4
CDKL3Q8IVW4 AC069271.1-201ENST00000445577 156 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms