Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RNU6-1189P-201ENST00000383958 107 ntBASIC1.24□□□□□ -2.21
HERC6Q8IVU3 Y_RNA.410-201ENST00000383992 113 ntBASIC1.24□□□□□ -2.21
HERC6Q8IVU3 Y_RNA.440-201ENST00000384120 114 ntBASIC1.24□□□□□ -2.21
HERC6Q8IVU3 Y_RNA.506-201ENST00000384494 102 ntBASIC1.24□□□□□ -2.21
HERC6Q8IVU3 RNA5SP436-201ENST00000516020 115 ntBASIC1.24□□□□□ -2.21
HERC6Q8IVU3 RNA5SP404-201ENST00000517118 132 ntBASIC1.24□□□□□ -2.21
HERC6Q8IVU3 MIR3646-201ENST00000578301 84 ntBASIC1.24□□□□□ -2.21
HERC6Q8IVU3 SNORD115-40-201ENST00000606510 82 ntBASIC1.24□□□□□ -2.21
HERC6Q8IVU3 MIR4791-201ENST00000607666 84 ntBASIC1.24□□□□□ -2.21
HERC6Q8IVU3 AC243994.1-201ENST00000618627 109 ntBASIC1.24□□□□□ -2.21
HERC6Q8IVU3 Y_RNA.778-201ENST00000620203 90 ntBASIC1.24□□□□□ -2.21
HERC6Q8IVU3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HERC6Q8IVU3 Y_RNA.251-201ENST00000364551 99 ntBASIC1.23□□□□□ -2.21
HERC6Q8IVU3 RNU4-11P-201ENST00000365287 132 ntBASIC1.23□□□□□ -2.21
HERC6Q8IVU3 RNU6-1062P-201ENST00000383908 107 ntBASIC1.23□□□□□ -2.21
HERC6Q8IVU3 Y_RNA.497-201ENST00000384447 98 ntBASIC1.23□□□□□ -2.21
HERC6Q8IVU3 MIR624-201ENST00000385217 97 ntBASIC1.23□□□□□ -2.21
HERC6Q8IVU3 SNORA40.5-201ENST00000391061 128 ntBASIC1.23□□□□□ -2.21
HERC6Q8IVU3 RNU7-197P-201ENST00000458836 62 ntBASIC1.23□□□□□ -2.21
HERC6Q8IVU3 RNU7-200P-201ENST00000516105 62 ntBASIC1.23□□□□□ -2.21
HERC6Q8IVU3 RNU6-346P-201ENST00000516288 111 ntBASIC1.23□□□□□ -2.21
HERC6Q8IVU3 SCARNA15-202ENST00000516881 127 ntBASIC1.23□□□□□ -2.21
HERC6Q8IVU3 AC090821.2-201ENST00000523552 176 ntBASIC1.23□□□□□ -2.21
HERC6Q8IVU3 MTND5P32-201ENST00000560711 1802 ntBASIC1.22□□□□□ -2.21
HERC6Q8IVU3 SNORA25.3-201ENST00000363205 127 ntBASIC1.22□□□□□ -2.21
HERC6Q8IVU3 RNU1-124P-201ENST00000363861 145 ntBASIC1.22□□□□□ -2.21
HERC6Q8IVU3 Y_RNA.205-201ENST00000364128 113 ntBASIC1.22□□□□□ -2.21
HERC6Q8IVU3 SNORA75.5-201ENST00000391291 81 ntBASIC1.22□□□□□ -2.21
HERC6Q8IVU3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.22□□□□□ -2.21
HERC6Q8IVU3 RNA5SP127-201ENST00000411051 133 ntBASIC1.22□□□□□ -2.21
HERC6Q8IVU3 RNU7-67P-201ENST00000459003 62 ntBASIC1.22□□□□□ -2.21
HERC6Q8IVU3 RNU7-21P-201ENST00000459430 62 ntBASIC1.22□□□□□ -2.21
HERC6Q8IVU3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.22□□□□□ -2.21
HERC6Q8IVU3 MIR5197-201ENST00000583721 112 ntBASIC1.22□□□□□ -2.21
HERC6Q8IVU3 SEPT14P17-201ENST00000617978 177 ntBASIC1.22□□□□□ -2.21
HERC6Q8IVU3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
HERC6Q8IVU3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
HERC6Q8IVU3 AC008163.1-202ENST00000636004 2889 ntBASIC1.21□□□□□ -2.22
HERC6Q8IVU3 Y_RNA.330-201ENST00000365230 109 ntBASIC1.21□□□□□ -2.22
HERC6Q8IVU3 SNORA27-201ENST00000384323 126 ntBASIC1.21□□□□□ -2.22
HERC6Q8IVU3 MIR19B1-201ENST00000384829 87 ntBASIC1.21□□□□□ -2.22
HERC6Q8IVU3 AC002429.1-201ENST00000437672 148 ntBASIC1.21□□□□□ -2.22
HERC6Q8IVU3 RN7SKP179-201ENST00000516126 217 ntBASIC1.21□□□□□ -2.22
HERC6Q8IVU3 RNU2-60P-201ENST00000517290 128 ntBASIC1.21□□□□□ -2.22
HERC6Q8IVU3 AC112693.2-201ENST00000556538 232 ntBASIC1.21□□□□□ -2.22
HERC6Q8IVU3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.21□□□□□ -2.22
HERC6Q8IVU3 RNU6-508P-201ENST00000363231 103 ntBASIC1.2□□□□□ -2.22
HERC6Q8IVU3 RNU6-396P-201ENST00000365369 105 ntBASIC1.2□□□□□ -2.22
HERC6Q8IVU3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.2□□□□□ -2.22
HERC6Q8IVU3 Y_RNA.400-201ENST00000383963 111 ntBASIC1.2□□□□□ -2.22
HERC6Q8IVU3 SNORA24-201ENST00000384096 131 ntBASIC1.2□□□□□ -2.22
HERC6Q8IVU3 RNU6-125P-201ENST00000384505 107 ntBASIC1.2□□□□□ -2.22
HERC6Q8IVU3 MIR200A-201ENST00000384875 90 ntBASIC1.2□□□□□ -2.22
HERC6Q8IVU3 snoU13.16-201ENST00000459350 104 ntBASIC1.2□□□□□ -2.22
HERC6Q8IVU3 RNA5SP272-201ENST00000516095 111 ntBASIC1.2□□□□□ -2.22
HERC6Q8IVU3 MIR2115-201ENST00000516657 100 ntBASIC1.2□□□□□ -2.22
HERC6Q8IVU3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.2□□□□□ -2.22
HERC6Q8IVU3 AP003716.2-201ENST00000528260 108 ntBASIC1.2□□□□□ -2.22
HERC6Q8IVU3 MTND1P7-201ENST00000632801 297 ntBASIC1.2□□□□□ -2.22
HERC6Q8IVU3 Y_RNA.52-201ENST00000362760 96 ntBASIC1.19□□□□□ -2.22
HERC6Q8IVU3 RNU6-774P-201ENST00000363238 107 ntBASIC1.19□□□□□ -2.22
HERC6Q8IVU3 Y_RNA.215-201ENST00000364204 112 ntBASIC1.19□□□□□ -2.22
HERC6Q8IVU3 MIR569-201ENST00000385228 96 ntBASIC1.19□□□□□ -2.22
HERC6Q8IVU3 SNORD37.2-201ENST00000391075 66 ntBASIC1.19□□□□□ -2.22
HERC6Q8IVU3 RNU7-53P-201ENST00000516705 60 ntBASIC1.19□□□□□ -2.22
HERC6Q8IVU3 RNU6-1149P-201ENST00000516810 97 ntBASIC1.19□□□□□ -2.22
HERC6Q8IVU3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.19□□□□□ -2.22
HERC6Q8IVU3 AC131055.1-201ENST00000584626 316 ntBASIC1.19□□□□□ -2.22
HERC6Q8IVU3 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.19□□□□□ -2.22
HERC6Q8IVU3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
HERC6Q8IVU3 MIR373-201ENST00000362273 69 ntBASIC1.18□□□□□ -2.22
HERC6Q8IVU3 Y_RNA.351-201ENST00000365436 96 ntBASIC1.18□□□□□ -2.22
HERC6Q8IVU3 RNU6-913P-201ENST00000390913 95 ntBASIC1.18□□□□□ -2.22
HERC6Q8IVU3 SNORA75.2-201ENST00000391138 150 ntBASIC1.18□□□□□ -2.22
HERC6Q8IVU3 SNORA75.3-201ENST00000391231 150 ntBASIC1.18□□□□□ -2.22
HERC6Q8IVU3 MIR1302-7-201ENST00000408841 72 ntBASIC1.18□□□□□ -2.22
HERC6Q8IVU3 RPS29P24-201ENST00000486345 171 ntBASIC1.18□□□□□ -2.22
HERC6Q8IVU3 RNU6-998P-201ENST00000515894 101 ntBASIC1.18□□□□□ -2.22
HERC6Q8IVU3 RNA5SP236-201ENST00000516169 116 ntBASIC1.18□□□□□ -2.22
HERC6Q8IVU3 RNU6-958P-201ENST00000516995 106 ntBASIC1.18□□□□□ -2.22
HERC6Q8IVU3 MIR5000-201ENST00000577717 103 ntBASIC1.18□□□□□ -2.22
HERC6Q8IVU3 SNORD114-24-201ENST00000365029 72 ntBASIC1.17□□□□□ -2.22
HERC6Q8IVU3 RNY1P5-201ENST00000383890 115 ntBASIC1.17□□□□□ -2.22
HERC6Q8IVU3 RNU6-460P-201ENST00000391158 108 ntBASIC1.17□□□□□ -2.22
HERC6Q8IVU3 MIR1185-1-201ENST00000408598 86 ntBASIC1.17□□□□□ -2.22
HERC6Q8IVU3 SNORA25.12-201ENST00000516202 82 ntBASIC1.17□□□□□ -2.22
HERC6Q8IVU3 Y_RNA.686-201ENST00000516548 134 ntBASIC1.17□□□□□ -2.22
HERC6Q8IVU3 MIR548X2-201ENST00000579776 100 ntBASIC1.17□□□□□ -2.22
HERC6Q8IVU3 MIR548AO-201ENST00000579992 96 ntBASIC1.17□□□□□ -2.22
HERC6Q8IVU3 MIR3133-201ENST00000583157 78 ntBASIC1.17□□□□□ -2.22
HERC6Q8IVU3 AC211469.2-201ENST00000605461 205 ntBASIC1.17□□□□□ -2.22
HERC6Q8IVU3 AC012676.2-201ENST00000619258 186 ntBASIC1.17□□□□□ -2.22
HERC6Q8IVU3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
HERC6Q8IVU3 MIR342-201ENST00000362212 99 ntBASIC1.16□□□□□ -2.22
HERC6Q8IVU3 SNORA20-201ENST00000384662 132 ntBASIC1.16□□□□□ -2.22
HERC6Q8IVU3 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
HERC6Q8IVU3 FABP5P4-201ENST00000437203 171 ntBASIC1.16□□□□□ -2.22
HERC6Q8IVU3 AL392103.1-201ENST00000447000 198 ntBASIC1.16□□□□□ -2.22
HERC6Q8IVU3 HSPE1P19-201ENST00000603327 295 ntBASIC1.16□□□□□ -2.22
HERC6Q8IVU3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 293.8 ms