Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RNA5SP456-201ENST00000364002 114 ntBASIC2.28□□□□□ -2.04
ATG4DQ86TL0 Y_RNA.537-201ENST00000384626 109 ntBASIC2.28□□□□□ -2.04
ATG4DQ86TL0 snoU13.16-201ENST00000459350 104 ntBASIC2.28□□□□□ -2.04
ATG4DQ86TL0 AC114801.3-201ENST00000510231 177 ntBASIC2.28□□□□□ -2.04
ATG4DQ86TL0 RNU6-523P-201ENST00000516304 54 ntBASIC2.28□□□□□ -2.04
ATG4DQ86TL0 AC026271.5-201ENST00000577873 130 ntBASIC2.28□□□□□ -2.04
ATG4DQ86TL0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
ATG4DQ86TL0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ATG4DQ86TL0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
ATG4DQ86TL0 Y_RNA.98-201ENST00000363109 102 ntBASIC2.27□□□□□ -2.05
ATG4DQ86TL0 SNORD114-10-201ENST00000363409 72 ntBASIC2.27□□□□□ -2.05
ATG4DQ86TL0 DEFA7P-201ENST00000382676 285 ntBASIC2.27□□□□□ -2.05
ATG4DQ86TL0 RNU6-480P-201ENST00000384332 107 ntBASIC2.27□□□□□ -2.05
ATG4DQ86TL0 SNORD38.2-201ENST00000384470 69 ntBASIC2.27□□□□□ -2.05
ATG4DQ86TL0 RNU6-950P-201ENST00000384651 107 ntBASIC2.27□□□□□ -2.05
ATG4DQ86TL0 MIR27B-201ENST00000385129 97 ntBASIC2.27□□□□□ -2.05
ATG4DQ86TL0 RNU6-602P-201ENST00000411155 105 ntBASIC2.27□□□□□ -2.05
ATG4DQ86TL0 RN7SL429P-201ENST00000479090 223 ntBASIC2.27□□□□□ -2.05
ATG4DQ86TL0 RN7SL489P-201ENST00000486185 223 ntBASIC2.27□□□□□ -2.05
ATG4DQ86TL0 RN7SL327P-201ENST00000488659 223 ntBASIC2.27□□□□□ -2.05
ATG4DQ86TL0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.27□□□□□ -2.05
ATG4DQ86TL0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.27□□□□□ -2.05
ATG4DQ86TL0 RN7SL853P-201ENST00000617250 223 ntBASIC2.27□□□□□ -2.05
ATG4DQ86TL0 U4atac.1-201ENST00000618345 95 ntBASIC2.27□□□□□ -2.05
ATG4DQ86TL0 AC010297.1-201ENST00000623948 149 ntBASIC2.27□□□□□ -2.05
ATG4DQ86TL0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
ATG4DQ86TL0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
ATG4DQ86TL0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.26□□□□□ -2.05
ATG4DQ86TL0 RNU1-138P-201ENST00000384093 164 ntBASIC2.26□□□□□ -2.05
ATG4DQ86TL0 RPL23AP6-201ENST00000446637 472 ntBASIC2.26□□□□□ -2.05
ATG4DQ86TL0 RNA5SP320-201ENST00000516263 124 ntBASIC2.26□□□□□ -2.05
ATG4DQ86TL0 SNORA31.15-201ENST00000516771 132 ntBASIC2.26□□□□□ -2.05
ATG4DQ86TL0 AC021506.2-201ENST00000612354 169 ntBASIC2.26□□□□□ -2.05
ATG4DQ86TL0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
ATG4DQ86TL0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.26□□□□□ -2.05
ATG4DQ86TL0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
ATG4DQ86TL0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
ATG4DQ86TL0 MIR6073-201ENST00000352083 89 ntBASIC2.25□□□□□ -2.05
ATG4DQ86TL0 MIR627-201ENST00000384979 97 ntBASIC2.25□□□□□ -2.05
ATG4DQ86TL0 RNU11-3P-201ENST00000391111 133 ntBASIC2.25□□□□□ -2.05
ATG4DQ86TL0 MIR1236-201ENST00000408340 102 ntBASIC2.25□□□□□ -2.05
ATG4DQ86TL0 AL513328.1-201ENST00000446460 224 ntBASIC2.25□□□□□ -2.05
ATG4DQ86TL0 AL049779.4-201ENST00000604500 156 ntBASIC2.25□□□□□ -2.05
ATG4DQ86TL0 AP001362.1-201ENST00000625165 124 ntBASIC2.25□□□□□ -2.05
ATG4DQ86TL0 Z97988.1-201ENST00000637697 135 ntBASIC2.25□□□□□ -2.05
ATG4DQ86TL0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.25□□□□□ -2.05
ATG4DQ86TL0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
ATG4DQ86TL0 Z82195.2-201ENST00000612348 18351 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 RNU6-1094P-201ENST00000362416 104 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 RNA5SP393-201ENST00000363423 117 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 RNY1P13-201ENST00000365030 105 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 Y_RNA.354-201ENST00000365448 111 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 RNU6-1067P-201ENST00000384752 107 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 RNU6-447P-201ENST00000410293 104 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 RNU6-1118P-201ENST00000410382 104 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 RNU6-1076P-201ENST00000410397 104 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 RNU6-355P-201ENST00000410427 104 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 RNU6-791P-201ENST00000410467 104 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 RNU6-705P-201ENST00000410601 104 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 RNU6-1100P-201ENST00000410691 104 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 RNU6-860P-201ENST00000410860 104 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 RNU6-1217P-201ENST00000411276 104 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 RNU6-785P-201ENST00000411324 104 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 SCARNA18B-201ENST00000458806 135 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 SNORD4B-201ENST00000459083 72 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 RNU6-917P-201ENST00000516294 104 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 RNVU1-2-201ENST00000516326 135 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 RNA5SP437-201ENST00000517249 129 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 MIR3616-201ENST00000584070 92 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 U6.90-201ENST00000614007 104 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 U6.70-201ENST00000620287 104 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 U4.3-201ENST00000621047 82 ntBASIC2.24□□□□□ -2.05
ATG4DQ86TL0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.24□□□□□ -2.05
ATG4DQ86TL0 RNA5SP289-201ENST00000362332 137 ntBASIC2.23□□□□□ -2.05
ATG4DQ86TL0 RNA5SP133-201ENST00000363368 119 ntBASIC2.23□□□□□ -2.05
ATG4DQ86TL0 SNORD114-30-201ENST00000364448 72 ntBASIC2.23□□□□□ -2.05
ATG4DQ86TL0 SNORA67.4-201ENST00000384688 142 ntBASIC2.23□□□□□ -2.05
ATG4DQ86TL0 MIR29C-201ENST00000385231 88 ntBASIC2.23□□□□□ -2.05
ATG4DQ86TL0 MIR660-201ENST00000385235 97 ntBASIC2.23□□□□□ -2.05
ATG4DQ86TL0 RNU2-7P-201ENST00000410794 178 ntBASIC2.23□□□□□ -2.05
ATG4DQ86TL0 AC008413.1-201ENST00000511864 177 ntBASIC2.23□□□□□ -2.05
ATG4DQ86TL0 MIR3134-201ENST00000579433 74 ntBASIC2.23□□□□□ -2.05
ATG4DQ86TL0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
ATG4DQ86TL0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.22□□□□□ -2.05
ATG4DQ86TL0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ATG4DQ86TL0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
ATG4DQ86TL0 RNU6-624P-201ENST00000363411 107 ntBASIC2.22□□□□□ -2.05
ATG4DQ86TL0 RNU1-91P-201ENST00000364746 163 ntBASIC2.22□□□□□ -2.05
ATG4DQ86TL0 RNU4-83P-201ENST00000410863 133 ntBASIC2.22□□□□□ -2.05
ATG4DQ86TL0 AC092427.1-202ENST00000430569 476 ntBASIC2.22□□□□□ -2.05
ATG4DQ86TL0 AC099513.1-201ENST00000490423 301 ntBASIC2.22□□□□□ -2.05
ATG4DQ86TL0 SNORA74.3-201ENST00000517108 154 ntBASIC2.22□□□□□ -2.05
ATG4DQ86TL0 CYP3A52P-201ENST00000563326 91 ntBASIC2.22□□□□□ -2.05
ATG4DQ86TL0 AC080100.1-201ENST00000624239 5356 ntBASIC2.22□□□□□ -2.05
ATG4DQ86TL0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
ATG4DQ86TL0 RNU6-590P-201ENST00000365039 107 ntBASIC2.21□□□□□ -2.06
ATG4DQ86TL0 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
ATG4DQ86TL0 AL359511.1-201ENST00000402970 211 ntBASIC2.21□□□□□ -2.06
ATG4DQ86TL0 AC019129.1-201ENST00000403786 261 ntBASIC2.21□□□□□ -2.06
ATG4DQ86TL0 AC104389.3-201ENST00000445629 235 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms