Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 RNU6-907P-201ENST00000390924 102 ntBASIC0.89□□□□□ -2.27
CDHR3Q6ZTQ4 RNU6-588P-201ENST00000410281 105 ntBASIC0.89□□□□□ -2.27
CDHR3Q6ZTQ4 RNU2-64P-201ENST00000411315 191 ntBASIC0.89□□□□□ -2.27
CDHR3Q6ZTQ4 AC244023.1-201ENST00000426884 112 ntBASIC0.89□□□□□ -2.27
CDHR3Q6ZTQ4 AL035398.1-201ENST00000430869 322 ntBASIC0.89□□□□□ -2.27
CDHR3Q6ZTQ4 AC107297.1-201ENST00000459991 176 ntBASIC0.89□□□□□ -2.27
CDHR3Q6ZTQ4 RPS29P1-201ENST00000465274 159 ntBASIC0.89□□□□□ -2.27
CDHR3Q6ZTQ4 AC107027.2-201ENST00000512197 115 ntBASIC0.89□□□□□ -2.27
CDHR3Q6ZTQ4 Y_RNA.662-201ENST00000516028 97 ntBASIC0.89□□□□□ -2.27
CDHR3Q6ZTQ4 RNU7-121P-201ENST00000516604 62 ntBASIC0.89□□□□□ -2.27
CDHR3Q6ZTQ4 RNU6-1149P-201ENST00000516810 97 ntBASIC0.89□□□□□ -2.27
CDHR3Q6ZTQ4 MIR3973-201ENST00000579824 107 ntBASIC0.89□□□□□ -2.27
CDHR3Q6ZTQ4 MIR4661-201ENST00000582720 75 ntBASIC0.89□□□□□ -2.27
CDHR3Q6ZTQ4 AC242498.1-201ENST00000604134 111 ntBASIC0.89□□□□□ -2.27
CDHR3Q6ZTQ4 SEPT14P17-201ENST00000617978 177 ntBASIC0.89□□□□□ -2.27
CDHR3Q6ZTQ4 FTX_2.1-201ENST00000618816 94 ntBASIC0.89□□□□□ -2.27
CDHR3Q6ZTQ4 Y_RNA.355-201ENST00000365462 98 ntBASIC0.88□□□□□ -2.27
CDHR3Q6ZTQ4 MIR624-201ENST00000385217 97 ntBASIC0.88□□□□□ -2.27
CDHR3Q6ZTQ4 RNU6-205P-201ENST00000390858 107 ntBASIC0.88□□□□□ -2.27
CDHR3Q6ZTQ4 RNU6-239P-201ENST00000390990 99 ntBASIC0.88□□□□□ -2.27
CDHR3Q6ZTQ4 SNORA26.6-201ENST00000391256 115 ntBASIC0.88□□□□□ -2.27
CDHR3Q6ZTQ4 MIR942-201ENST00000401111 86 ntBASIC0.88□□□□□ -2.27
CDHR3Q6ZTQ4 RNA5SP127-201ENST00000411051 133 ntBASIC0.88□□□□□ -2.27
CDHR3Q6ZTQ4 RNU7-73P-201ENST00000458743 63 ntBASIC0.88□□□□□ -2.27
CDHR3Q6ZTQ4 RNU7-90P-201ENST00000459216 62 ntBASIC0.88□□□□□ -2.27
CDHR3Q6ZTQ4 snoU13.16-201ENST00000459350 104 ntBASIC0.88□□□□□ -2.27
CDHR3Q6ZTQ4 snoU13.21-201ENST00000459368 105 ntBASIC0.88□□□□□ -2.27
CDHR3Q6ZTQ4 PDCD5P2-201ENST00000507570 312 ntBASIC0.88□□□□□ -2.27
CDHR3Q6ZTQ4 RNU2-60P-201ENST00000517290 128 ntBASIC0.88□□□□□ -2.27
CDHR3Q6ZTQ4 AC036111.3-201ENST00000526389 112 ntBASIC0.88□□□□□ -2.27
CDHR3Q6ZTQ4 AL020996.3-201ENST00000606617 222 ntBASIC0.88□□□□□ -2.27
CDHR3Q6ZTQ4 uc_338.6-201ENST00000613544 171 ntBASIC0.88□□□□□ -2.27
CDHR3Q6ZTQ4 MIR6734-201ENST00000621166 68 ntBASIC0.88□□□□□ -2.27
CDHR3Q6ZTQ4 AC091932.4-201ENST00000623386 200 ntBASIC0.88□□□□□ -2.27
CDHR3Q6ZTQ4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.88□□□□□ -2.27
CDHR3Q6ZTQ4 Y_RNA.52-201ENST00000362760 96 ntBASIC0.87□□□□□ -2.27
CDHR3Q6ZTQ4 Y_RNA.272-201ENST00000364696 102 ntBASIC0.87□□□□□ -2.27
CDHR3Q6ZTQ4 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
CDHR3Q6ZTQ4 RNU6-804P-201ENST00000384286 107 ntBASIC0.87□□□□□ -2.27
CDHR3Q6ZTQ4 RNU6-1067P-201ENST00000384752 107 ntBASIC0.87□□□□□ -2.27
CDHR3Q6ZTQ4 MIR200A-201ENST00000384875 90 ntBASIC0.87□□□□□ -2.27
CDHR3Q6ZTQ4 MIR548I3-201ENST00000408378 149 ntBASIC0.87□□□□□ -2.27
CDHR3Q6ZTQ4 RNU7-96P-201ENST00000459535 64 ntBASIC0.87□□□□□ -2.27
CDHR3Q6ZTQ4 ACA64.5-201ENST00000516207 127 ntBASIC0.87□□□□□ -2.27
CDHR3Q6ZTQ4 AC131055.1-201ENST00000584626 316 ntBASIC0.87□□□□□ -2.27
CDHR3Q6ZTQ4 RNU6-94P-201ENST00000607728 107 ntBASIC0.87□□□□□ -2.27
CDHR3Q6ZTQ4 MIR6857-201ENST00000613267 93 ntBASIC0.87□□□□□ -2.27
CDHR3Q6ZTQ4 AL596211.1-201ENST00000569873 2277 ntBASIC0.87□□□□□ -2.27
CDHR3Q6ZTQ4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CDHR3Q6ZTQ4 SNORA25.7-201ENST00000364375 127 ntBASIC0.86□□□□□ -2.27
CDHR3Q6ZTQ4 Y_RNA.357-201ENST00000365487 109 ntBASIC0.86□□□□□ -2.27
CDHR3Q6ZTQ4 RNU6-886P-201ENST00000384319 105 ntBASIC0.86□□□□□ -2.27
CDHR3Q6ZTQ4 Y_RNA.497-201ENST00000384447 98 ntBASIC0.86□□□□□ -2.27
CDHR3Q6ZTQ4 RNU6-602P-201ENST00000411155 105 ntBASIC0.86□□□□□ -2.27
CDHR3Q6ZTQ4 RNA5SP220-201ENST00000516298 104 ntBASIC0.86□□□□□ -2.27
CDHR3Q6ZTQ4 RNU6-182P-201ENST00000516970 105 ntBASIC0.86□□□□□ -2.27
CDHR3Q6ZTQ4 MIR4698-201ENST00000577795 80 ntBASIC0.86□□□□□ -2.27
CDHR3Q6ZTQ4 FAM71BP1-201ENST00000604431 523 ntBASIC0.86□□□□□ -2.27
CDHR3Q6ZTQ4 AC211469.2-201ENST00000605461 205 ntBASIC0.86□□□□□ -2.27
CDHR3Q6ZTQ4 Z97988.1-201ENST00000637697 135 ntBASIC0.86□□□□□ -2.27
CDHR3Q6ZTQ4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
CDHR3Q6ZTQ4 Y_RNA.8-201ENST00000362353 102 ntBASIC0.85□□□□□ -2.27
CDHR3Q6ZTQ4 RNU4-16P-201ENST00000364737 141 ntBASIC0.85□□□□□ -2.27
CDHR3Q6ZTQ4 Y_RNA.337-201ENST00000365312 102 ntBASIC0.85□□□□□ -2.27
CDHR3Q6ZTQ4 RNU6-42P-201ENST00000384165 107 ntBASIC0.85□□□□□ -2.27
CDHR3Q6ZTQ4 MT-TR-201ENST00000387439 65 ntBASIC0.85□□□□□ -2.27
CDHR3Q6ZTQ4 RNU6-394P-201ENST00000410735 107 ntBASIC0.85□□□□□ -2.27
CDHR3Q6ZTQ4 AC015818.7-201ENST00000428754 109 ntBASIC0.85□□□□□ -2.27
CDHR3Q6ZTQ4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.85□□□□□ -2.27
CDHR3Q6ZTQ4 AC087499.7-201ENST00000441958 109 ntBASIC0.85□□□□□ -2.27
CDHR3Q6ZTQ4 RNA5SP236-201ENST00000516169 116 ntBASIC0.85□□□□□ -2.27
CDHR3Q6ZTQ4 MTND5P41-201ENST00000517498 206 ntBASIC0.85□□□□□ -2.27
CDHR3Q6ZTQ4 SNORA4-201ENST00000584302 138 ntBASIC0.85□□□□□ -2.27
CDHR3Q6ZTQ4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.84□□□□□ -2.27
CDHR3Q6ZTQ4 RNU6-396P-201ENST00000365369 105 ntBASIC0.84□□□□□ -2.27
CDHR3Q6ZTQ4 SNORA2B-201ENST00000384583 137 ntBASIC0.84□□□□□ -2.27
CDHR3Q6ZTQ4 SNORD12C-201ENST00000386307 89 ntBASIC0.84□□□□□ -2.27
CDHR3Q6ZTQ4 RNU6-613P-201ENST00000410412 108 ntBASIC0.84□□□□□ -2.27
CDHR3Q6ZTQ4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.84□□□□□ -2.27
CDHR3Q6ZTQ4 RNU7-53P-201ENST00000516705 60 ntBASIC0.84□□□□□ -2.27
CDHR3Q6ZTQ4 MIR6740-201ENST00000618268 113 ntBASIC0.84□□□□□ -2.27
CDHR3Q6ZTQ4 MIR6717-201ENST00000622747 73 ntBASIC0.84□□□□□ -2.27
CDHR3Q6ZTQ4 AC021753.1-201ENST00000635724 168 ntBASIC0.84□□□□□ -2.27
CDHR3Q6ZTQ4 MIR6844-201ENST00000637122 62 ntBASIC0.84□□□□□ -2.27
CDHR3Q6ZTQ4 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
CDHR3Q6ZTQ4 Y_RNA.251-201ENST00000364551 99 ntBASIC0.83□□□□□ -2.28
CDHR3Q6ZTQ4 SNORA1.1-201ENST00000364671 133 ntBASIC0.83□□□□□ -2.28
CDHR3Q6ZTQ4 RNU4-11P-201ENST00000365287 132 ntBASIC0.83□□□□□ -2.28
CDHR3Q6ZTQ4 RNU6-1335P-201ENST00000365426 107 ntBASIC0.83□□□□□ -2.28
CDHR3Q6ZTQ4 Y_RNA.398-201ENST00000383952 99 ntBASIC0.83□□□□□ -2.28
CDHR3Q6ZTQ4 SNORA75.5-201ENST00000391291 81 ntBASIC0.83□□□□□ -2.28
CDHR3Q6ZTQ4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.83□□□□□ -2.28
CDHR3Q6ZTQ4 POLR2J4-204ENST00000418424 324 ntBASIC0.83□□□□□ -2.28
CDHR3Q6ZTQ4 snoU13.18-201ENST00000459483 104 ntBASIC0.83□□□□□ -2.28
CDHR3Q6ZTQ4 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
CDHR3Q6ZTQ4 Y_RNA.686-201ENST00000516548 134 ntBASIC0.83□□□□□ -2.28
CDHR3Q6ZTQ4 MIR2115-201ENST00000516657 100 ntBASIC0.83□□□□□ -2.28
CDHR3Q6ZTQ4 RNU11-2P-201ENST00000516898 142 ntBASIC0.83□□□□□ -2.28
CDHR3Q6ZTQ4 DNAJC19P2-201ENST00000593340 302 ntBASIC0.83□□□□□ -2.28
CDHR3Q6ZTQ4 MIR7111-201ENST00000619751 72 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 195.7 ms