Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 RNU6-318P-201ENST00000384283 103 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 MIR517A-201ENST00000385001 87 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 MTCO2P21-201ENST00000419780 677 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 MTND3P1-201ENST00000441336 220 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 AC004467.1-201ENST00000615678 330 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 AC079248.2-201ENST00000623779 326 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 snoR1.1-201ENST00000628177 80 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.11□□□□□ -2.59
CSPG4Q6UVK1 RNU6-74P-201ENST00000384235 107 ntBASIC-1.11□□□□□ -2.59
CSPG4Q6UVK1 AL606845.1-201ENST00000404881 255 ntBASIC-1.11□□□□□ -2.59
CSPG4Q6UVK1 RNU2-51P-201ENST00000410708 197 ntBASIC-1.11□□□□□ -2.59
CSPG4Q6UVK1 AC098826.2-201ENST00000452011 651 ntBASIC-1.11□□□□□ -2.59
CSPG4Q6UVK1 SNORD67.1-201ENST00000516618 108 ntBASIC-1.11□□□□□ -2.59
CSPG4Q6UVK1 RNU7-53P-201ENST00000516705 60 ntBASIC-1.11□□□□□ -2.59
CSPG4Q6UVK1 AC145423.2-201ENST00000610631 239 ntBASIC-1.11□□□□□ -2.59
CSPG4Q6UVK1 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.11□□□□□ -2.59
CSPG4Q6UVK1 RNU7-180P-201ENST00000459240 63 ntBASIC-1.11□□□□□ -2.59
CSPG4Q6UVK1 AC098479.1-201ENST00000609225 154 ntBASIC-1.11□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 MIR599-201ENST00000385069 95 ntBASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 MIR507-201ENST00000385234 94 ntBASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 MTND3P7-201ENST00000474435 343 ntBASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 AC097510.1-201ENST00000510945 133 ntBASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 RNU7-115P-201ENST00000516433 55 ntBASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 SNORA18.6-201ENST00000516792 115 ntBASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 MIR4460-201ENST00000577862 86 ntBASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 AC018638.8-201ENST00000588755 281 ntBASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 MIR6773-201ENST00000612812 74 ntBASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 AL138960.2-201ENST00000625145 535 ntBASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 RNY1P11-201ENST00000363759 113 ntBASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 MIR582-201ENST00000365731 98 ntBASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 SNORA51.5-201ENST00000384126 131 ntBASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 RNU6-456P-201ENST00000384493 107 ntBASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 MIR216B-201ENST00000390186 82 ntBASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 SNORD42A-201ENST00000459584 64 ntBASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 MIR3672-201ENST00000584290 82 ntBASIC-1.12□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.13□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.13□□□□□ -2.59
CSPG4Q6UVK1 MT-TM-201ENST00000387377 68 ntBASIC-1.13□□□□□ -2.59
CSPG4Q6UVK1 SNORD75.2-201ENST00000408784 58 ntBASIC-1.13□□□□□ -2.59
CSPG4Q6UVK1 CHEK2P4-201ENST00000450340 246 ntBASIC-1.13□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.14□□□□□ -2.59
CSPG4Q6UVK1 SNORD114-4-201ENST00000363962 75 ntBASIC-1.14□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.14□□□□□ -2.59
CSPG4Q6UVK1 SNORD115-47-201ENST00000391226 86 ntBASIC-1.14□□□□□ -2.59
CSPG4Q6UVK1 SNORD12B-201ENST00000410433 91 ntBASIC-1.14□□□□□ -2.59
CSPG4Q6UVK1 BX295541.1-201ENST00000417774 250 ntBASIC-1.14□□□□□ -2.59
CSPG4Q6UVK1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.14□□□□□ -2.59
CSPG4Q6UVK1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.14□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.14□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.14□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.14□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.14□□□□□ -2.59
CSPG4Q6UVK1 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.14□□□□□ -2.59
CSPG4Q6UVK1 RNU6-790P-201ENST00000384479 105 ntBASIC-1.14□□□□□ -2.59
CSPG4Q6UVK1 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.14□□□□□ -2.59
CSPG4Q6UVK1 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.14□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 RNU5E-5P-201ENST00000365379 116 ntBASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 MIR548E-201ENST00000408287 88 ntBASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 AF228730.4-201ENST00000421457 183 ntBASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 AC093783.1-201ENST00000612976 329 ntBASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 AC006927.3-201ENST00000638789 384 ntBASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 SNORD113-7-201ENST00000363762 77 ntBASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 RNU6-595P-201ENST00000363944 107 ntBASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.231-201ENST00000364358 102 ntBASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.405-201ENST00000383979 100 ntBASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.451-201ENST00000384200 100 ntBASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.524-201ENST00000384564 100 ntBASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.561-201ENST00000384694 100 ntBASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 RNU6-592P-201ENST00000411333 103 ntBASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 RNU7-66P-201ENST00000459469 62 ntBASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 CCDC34P1-201ENST00000507441 517 ntBASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 RNU6-412P-201ENST00000516434 106 ntBASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.15□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.16□□□□□ -2.59
CSPG4Q6UVK1 RNU6-906P-201ENST00000384700 70 ntBASIC-1.16□□□□□ -2.59
CSPG4Q6UVK1 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.16□□□□□ -2.59
CSPG4Q6UVK1 RNU4-61P-201ENST00000411243 107 ntBASIC-1.16□□□□□ -2.59
CSPG4Q6UVK1 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.16□□□□□ -2.59
CSPG4Q6UVK1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.16□□□□□ -2.59
CSPG4Q6UVK1 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.16□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.16□□□□□ -2.6
CSPG4Q6UVK1 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.16□□□□□ -2.6
CSPG4Q6UVK1 MIR519A1-201ENST00000385257 85 ntBASIC-1.16□□□□□ -2.6
CSPG4Q6UVK1 RNU6-710P-201ENST00000410424 105 ntBASIC-1.16□□□□□ -2.6
CSPG4Q6UVK1 SNORD36C-201ENST00000516733 66 ntBASIC-1.16□□□□□ -2.6
CSPG4Q6UVK1 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.16□□□□□ -2.6
CSPG4Q6UVK1 AC092954.2-201ENST00000609103 430 ntBASIC-1.16□□□□□ -2.6
CSPG4Q6UVK1 RNU6-208P-201ENST00000362431 107 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms