Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 RNA5SP33-201ENST00000516687 98 ntBASIC2.44□□□□□ -2.02
PRPF40BQ6NWY9 SNRPGP19-201ENST00000603826 189 ntBASIC2.44□□□□□ -2.02
PRPF40BQ6NWY9 AL020996.3-201ENST00000606617 222 ntBASIC2.44□□□□□ -2.02
PRPF40BQ6NWY9 AP000553.5-201ENST00000641933 54 ntBASIC2.44□□□□□ -2.02
PRPF40BQ6NWY9 RNA5SP276-201ENST00000362580 94 ntBASIC2.43□□□□□ -2.02
PRPF40BQ6NWY9 RNA5SP190-201ENST00000365222 118 ntBASIC2.43□□□□□ -2.02
PRPF40BQ6NWY9 RNU6-1190P-201ENST00000410811 104 ntBASIC2.43□□□□□ -2.02
PRPF40BQ6NWY9 SNORD13-201ENST00000459299 104 ntBASIC2.43□□□□□ -2.02
PRPF40BQ6NWY9 AC090255.1-201ENST00000495779 349 ntBASIC2.43□□□□□ -2.02
PRPF40BQ6NWY9 RNU6-970P-201ENST00000516312 107 ntBASIC2.43□□□□□ -2.02
PRPF40BQ6NWY9 SNORA40.13-201ENST00000516379 120 ntBASIC2.43□□□□□ -2.02
PRPF40BQ6NWY9 AP001318.4-201ENST00000616637 121 ntBASIC2.43□□□□□ -2.02
PRPF40BQ6NWY9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
PRPF40BQ6NWY9 MIR6717-201ENST00000622747 73 ntBASIC2.43□□□□□ -2.02
PRPF40BQ6NWY9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.43□□□□□ -2.02
PRPF40BQ6NWY9 AC095038.3-201ENST00000634439 195 ntBASIC2.43□□□□□ -2.02
PRPF40BQ6NWY9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.43□□□□□ -2.02
PRPF40BQ6NWY9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PRPF40BQ6NWY9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
PRPF40BQ6NWY9 Y_RNA.155-201ENST00000363632 101 ntBASIC2.42□□□□□ -2.02
PRPF40BQ6NWY9 SNORA1.1-201ENST00000364671 133 ntBASIC2.42□□□□□ -2.02
PRPF40BQ6NWY9 RNU6-203P-201ENST00000384038 104 ntBASIC2.42□□□□□ -2.02
PRPF40BQ6NWY9 RNU6-913P-201ENST00000390913 95 ntBASIC2.42□□□□□ -2.02
PRPF40BQ6NWY9 RNU6-321P-201ENST00000410912 106 ntBASIC2.42□□□□□ -2.02
PRPF40BQ6NWY9 snoU13.16-201ENST00000459350 104 ntBASIC2.42□□□□□ -2.02
PRPF40BQ6NWY9 AC113410.1-201ENST00000505029 247 ntBASIC2.42□□□□□ -2.02
PRPF40BQ6NWY9 FAM71BP1-201ENST00000604431 523 ntBASIC2.42□□□□□ -2.02
PRPF40BQ6NWY9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
PRPF40BQ6NWY9 RNU4-36P-201ENST00000364294 144 ntBASIC2.41□□□□□ -2.02
PRPF40BQ6NWY9 Y_RNA.348-201ENST00000365403 103 ntBASIC2.41□□□□□ -2.02
PRPF40BQ6NWY9 MIR590-201ENST00000385008 97 ntBASIC2.41□□□□□ -2.02
PRPF40BQ6NWY9 SNORA19.1-201ENST00000410656 129 ntBASIC2.41□□□□□ -2.02
PRPF40BQ6NWY9 BTF3P4-201ENST00000418852 495 ntBASIC2.41□□□□□ -2.02
PRPF40BQ6NWY9 RNU6-917P-201ENST00000516294 104 ntBASIC2.41□□□□□ -2.02
PRPF40BQ6NWY9 RNU1-40P-201ENST00000516816 164 ntBASIC2.41□□□□□ -2.02
PRPF40BQ6NWY9 RNU1-97P-201ENST00000516872 164 ntBASIC2.41□□□□□ -2.02
PRPF40BQ6NWY9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.41□□□□□ -2.02
PRPF40BQ6NWY9 MIR5089-201ENST00000580047 84 ntBASIC2.41□□□□□ -2.02
PRPF40BQ6NWY9 AC087741.2-201ENST00000619415 172 ntBASIC2.41□□□□□ -2.02
PRPF40BQ6NWY9 AC008133.2-201ENST00000624540 351 ntBASIC2.41□□□□□ -2.02
PRPF40BQ6NWY9 MIR6841-201ENST00000637129 72 ntBASIC2.41□□□□□ -2.02
PRPF40BQ6NWY9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PRPF40BQ6NWY9 SNORD115-19-201ENST00000363098 82 ntBASIC2.4□□□□□ -2.03
PRPF40BQ6NWY9 SNORD115-18-201ENST00000363293 82 ntBASIC2.4□□□□□ -2.03
PRPF40BQ6NWY9 SNORD115-17-201ENST00000364612 82 ntBASIC2.4□□□□□ -2.03
PRPF40BQ6NWY9 RNA5SP37-201ENST00000365420 130 ntBASIC2.4□□□□□ -2.03
PRPF40BQ6NWY9 RNU6-905P-201ENST00000384434 107 ntBASIC2.4□□□□□ -2.03
PRPF40BQ6NWY9 MIR520C-201ENST00000385005 87 ntBASIC2.4□□□□□ -2.03
PRPF40BQ6NWY9 SNORA26.6-201ENST00000391256 115 ntBASIC2.4□□□□□ -2.03
PRPF40BQ6NWY9 RPS3AP1-201ENST00000413190 320 ntBASIC2.4□□□□□ -2.03
PRPF40BQ6NWY9 MIR3618-201ENST00000580330 88 ntBASIC2.4□□□□□ -2.03
PRPF40BQ6NWY9 MIR4764-201ENST00000580680 88 ntBASIC2.4□□□□□ -2.03
PRPF40BQ6NWY9 MIR5694-201ENST00000581190 76 ntBASIC2.4□□□□□ -2.03
PRPF40BQ6NWY9 MIR548AE2-201ENST00000583456 67 ntBASIC2.4□□□□□ -2.03
PRPF40BQ6NWY9 Y_RNA.818-201ENST00000618813 71 ntBASIC2.4□□□□□ -2.03
PRPF40BQ6NWY9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PRPF40BQ6NWY9 Y_RNA.78-201ENST00000362970 110 ntBASIC2.39□□□□□ -2.03
PRPF40BQ6NWY9 RNA5SP259-201ENST00000365541 109 ntBASIC2.39□□□□□ -2.03
PRPF40BQ6NWY9 Y_RNA.430-201ENST00000384081 110 ntBASIC2.39□□□□□ -2.03
PRPF40BQ6NWY9 Y_RNA.470-201ENST00000384307 117 ntBASIC2.39□□□□□ -2.03
PRPF40BQ6NWY9 MIR499A-201ENST00000384903 122 ntBASIC2.39□□□□□ -2.03
PRPF40BQ6NWY9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.39□□□□□ -2.03
PRPF40BQ6NWY9 AC004965.1-201ENST00000413033 213 ntBASIC2.39□□□□□ -2.03
PRPF40BQ6NWY9 HMGN1P33-201ENST00000432945 451 ntBASIC2.39□□□□□ -2.03
PRPF40BQ6NWY9 RNU6-1258P-201ENST00000516911 111 ntBASIC2.39□□□□□ -2.03
PRPF40BQ6NWY9 MIR4287-201ENST00000579398 78 ntBASIC2.39□□□□□ -2.03
PRPF40BQ6NWY9 MIR1255B1-201ENST00000636325 63 ntBASIC2.39□□□□□ -2.03
PRPF40BQ6NWY9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
PRPF40BQ6NWY9 SNORD115-2-201ENST00000362842 82 ntBASIC2.38□□□□□ -2.03
PRPF40BQ6NWY9 RNU6-640P-201ENST00000363693 105 ntBASIC2.38□□□□□ -2.03
PRPF40BQ6NWY9 RNU4-67P-201ENST00000364569 141 ntBASIC2.38□□□□□ -2.03
PRPF40BQ6NWY9 RNA5SP138-201ENST00000365098 114 ntBASIC2.38□□□□□ -2.03
PRPF40BQ6NWY9 SNORD115-20-201ENST00000365099 82 ntBASIC2.38□□□□□ -2.03
PRPF40BQ6NWY9 SNORA32-201ENST00000384072 121 ntBASIC2.38□□□□□ -2.03
PRPF40BQ6NWY9 RNU6-409P-201ENST00000384114 104 ntBASIC2.38□□□□□ -2.03
PRPF40BQ6NWY9 MIR513A1-201ENST00000385138 129 ntBASIC2.38□□□□□ -2.03
PRPF40BQ6NWY9 AL451046.2-201ENST00000403074 277 ntBASIC2.38□□□□□ -2.03
PRPF40BQ6NWY9 RNU6-109P-201ENST00000516364 107 ntBASIC2.38□□□□□ -2.03
PRPF40BQ6NWY9 RNU6-184P-201ENST00000516514 107 ntBASIC2.38□□□□□ -2.03
PRPF40BQ6NWY9 DEFB131E-201ENST00000532329 154 ntBASIC2.38□□□□□ -2.03
PRPF40BQ6NWY9 AL773524.1-201ENST00000614065 229 ntBASIC2.38□□□□□ -2.03
PRPF40BQ6NWY9 MIR8070-201ENST00000616510 88 ntBASIC2.38□□□□□ -2.03
PRPF40BQ6NWY9 MIR4679-1-201ENST00000637619 75 ntBASIC2.38□□□□□ -2.03
PRPF40BQ6NWY9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
PRPF40BQ6NWY9 MIR337-201ENST00000362281 93 ntBASIC2.37□□□□□ -2.03
PRPF40BQ6NWY9 RNU6-733P-201ENST00000410759 104 ntBASIC2.37□□□□□ -2.03
PRPF40BQ6NWY9 RNU6-904P-201ENST00000516206 101 ntBASIC2.37□□□□□ -2.03
PRPF40BQ6NWY9 SNORA25.15-201ENST00000516487 89 ntBASIC2.37□□□□□ -2.03
PRPF40BQ6NWY9 CYP3A52P-201ENST00000563326 91 ntBASIC2.37□□□□□ -2.03
PRPF40BQ6NWY9 Y_RNA.773-201ENST00000607168 90 ntBASIC2.37□□□□□ -2.03
PRPF40BQ6NWY9 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PRPF40BQ6NWY9 SNORA16B-201ENST00000364674 135 ntBASIC2.36□□□□□ -2.03
PRPF40BQ6NWY9 Y_RNA.369-201ENST00000365568 117 ntBASIC2.36□□□□□ -2.03
PRPF40BQ6NWY9 MIR9-3-201ENST00000385084 90 ntBASIC2.36□□□□□ -2.03
PRPF40BQ6NWY9 AC244636.1-201ENST00000421152 228 ntBASIC2.36□□□□□ -2.03
PRPF40BQ6NWY9 AC084768.2-201ENST00000622736 221 ntBASIC2.36□□□□□ -2.03
PRPF40BQ6NWY9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PRPF40BQ6NWY9 RNU6-363P-201ENST00000362895 105 ntBASIC2.35□□□□□ -2.03
PRPF40BQ6NWY9 Y_RNA.354-201ENST00000365448 111 ntBASIC2.35□□□□□ -2.03
PRPF40BQ6NWY9 RNU4-52P-201ENST00000384209 138 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms