Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 SEPT14P4-201ENST00000513445 186 ntBASIC-3.47□□□□□ -2.96
CCDC18Q5T9S5 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-3.47□□□□□ -2.96
CCDC18Q5T9S5 MIR342-201ENST00000362212 99 ntBASIC-3.47□□□□□ -2.97
CCDC18Q5T9S5 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-3.47□□□□□ -2.97
CCDC18Q5T9S5 Y_RNA.39-201ENST00000362620 98 ntBASIC-3.48□□□□□ -2.97
CCDC18Q5T9S5 Y_RNA.331-201ENST00000365267 102 ntBASIC-3.48□□□□□ -2.97
CCDC18Q5T9S5 MIR1-2-201ENST00000384961 85 ntBASIC-3.48□□□□□ -2.97
CCDC18Q5T9S5 RNU7-79P-201ENST00000516082 62 ntBASIC-3.48□□□□□ -2.97
CCDC18Q5T9S5 Y_RNA.135-201ENST00000363439 95 ntBASIC-3.49□□□□□ -2.97
CCDC18Q5T9S5 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.49□□□□□ -2.97
CCDC18Q5T9S5 AC104850.1-201ENST00000435940 476 ntBASIC-3.49□□□□□ -2.97
CCDC18Q5T9S5 Vault.3-201ENST00000516676 95 ntBASIC-3.49□□□□□ -2.97
CCDC18Q5T9S5 RNU6-850P-201ENST00000516934 103 ntBASIC-3.49□□□□□ -2.97
CCDC18Q5T9S5 MIR4308-201ENST00000580634 81 ntBASIC-3.49□□□□□ -2.97
CCDC18Q5T9S5 Y_RNA.14-201ENST00000362415 103 ntBASIC-3.5□□□□□ -2.97
CCDC18Q5T9S5 RNY1P16-201ENST00000363063 111 ntBASIC-3.5□□□□□ -2.97
CCDC18Q5T9S5 SNORA62.4-201ENST00000365504 151 ntBASIC-3.5□□□□□ -2.97
CCDC18Q5T9S5 MTND3P21-201ENST00000433774 331 ntBASIC-3.5□□□□□ -2.97
CCDC18Q5T9S5 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-3.5□□□□□ -2.97
CCDC18Q5T9S5 TPTE2P5-203ENST00000458118 728 ntBASIC-3.5□□□□□ -2.97
CCDC18Q5T9S5 MTCO2P30-201ENST00000503662 364 ntBASIC-3.5□□□□□ -2.97
CCDC18Q5T9S5 SNORD36C-201ENST00000516733 66 ntBASIC-3.5□□□□□ -2.97
CCDC18Q5T9S5 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-3.5□□□□□ -2.97
CCDC18Q5T9S5 Y_RNA.23-201ENST00000362496 106 ntBASIC-3.51□□□□□ -2.97
CCDC18Q5T9S5 Y_RNA.162-201ENST00000363683 102 ntBASIC-3.51□□□□□ -2.97
CCDC18Q5T9S5 MTND3P23-201ENST00000431980 347 ntBASIC-3.51□□□□□ -2.97
CCDC18Q5T9S5 USP9YP23-201ENST00000455085 407 ntBASIC-3.51□□□□□ -2.97
CCDC18Q5T9S5 SCARNA17.3-201ENST00000516381 125 ntBASIC-3.51□□□□□ -2.97
CCDC18Q5T9S5 Y_RNA.91-201ENST00000363042 107 ntBASIC-3.52□□□□□ -2.97
CCDC18Q5T9S5 Y_RNA.505-201ENST00000384489 102 ntBASIC-3.52□□□□□ -2.97
CCDC18Q5T9S5 AC018880.2-201ENST00000414265 201 ntBASIC-3.52□□□□□ -2.97
CCDC18Q5T9S5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-3.52□□□□□ -2.97
CCDC18Q5T9S5 RNU6-397P-201ENST00000516226 104 ntBASIC-3.52□□□□□ -2.97
CCDC18Q5T9S5 AP003357.1-201ENST00000604497 148 ntBASIC-3.52□□□□□ -2.97
CCDC18Q5T9S5 Y_RNA.472-201ENST00000384322 102 ntBASIC-3.53□□□□□ -2.97
CCDC18Q5T9S5 MIR1278-201ENST00000408753 81 ntBASIC-3.53□□□□□ -2.97
CCDC18Q5T9S5 MTATP6P13-201ENST00000438531 667 ntBASIC-3.53□□□□□ -2.97
CCDC18Q5T9S5 AC007012.1-201ENST00000567192 175 ntBASIC-3.53□□□□□ -2.97
CCDC18Q5T9S5 AC122108.2-201ENST00000611946 526 ntBASIC-3.53□□□□□ -2.97
CCDC18Q5T9S5 AC133104.2-201ENST00000615272 193 ntBASIC-3.53□□□□□ -2.97
CCDC18Q5T9S5 AC004467.1-201ENST00000615678 330 ntBASIC-3.53□□□□□ -2.97
CCDC18Q5T9S5 Y_RNA.582-201ENST00000391023 95 ntBASIC-3.54□□□□□ -2.98
CCDC18Q5T9S5 SNORD11-201ENST00000459124 84 ntBASIC-3.54□□□□□ -2.98
CCDC18Q5T9S5 MIR548AY-201ENST00000617669 107 ntBASIC-3.54□□□□□ -2.98
CCDC18Q5T9S5 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.54□□□□□ -2.98
CCDC18Q5T9S5 RNU6-214P-201ENST00000384130 107 ntBASIC-3.54□□□□□ -2.98
CCDC18Q5T9S5 RNU4-70P-201ENST00000384579 139 ntBASIC-3.54□□□□□ -2.98
CCDC18Q5T9S5 AL359881.1-201ENST00000602916 267 ntBASIC-3.54□□□□□ -2.98
CCDC18Q5T9S5 RNU5F-6P-201ENST00000362979 116 ntBASIC-3.55□□□□□ -2.98
CCDC18Q5T9S5 Y_RNA.215-201ENST00000364204 112 ntBASIC-3.55□□□□□ -2.98
CCDC18Q5T9S5 SNORD115-23-201ENST00000364461 82 ntBASIC-3.55□□□□□ -2.98
CCDC18Q5T9S5 RNU6-108P-201ENST00000365558 107 ntBASIC-3.55□□□□□ -2.98
CCDC18Q5T9S5 SNORD116.1-201ENST00000365628 92 ntBASIC-3.55□□□□□ -2.98
CCDC18Q5T9S5 RNU6-571P-201ENST00000384128 107 ntBASIC-3.55□□□□□ -2.98
CCDC18Q5T9S5 RNU6-1208P-201ENST00000459588 107 ntBASIC-3.55□□□□□ -2.98
CCDC18Q5T9S5 Y_RNA.809-201ENST00000516058 95 ntBASIC-3.55□□□□□ -2.98
CCDC18Q5T9S5 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-3.55□□□□□ -2.98
CCDC18Q5T9S5 Y_RNA.340-201ENST00000365330 92 ntBASIC-3.56□□□□□ -2.98
CCDC18Q5T9S5 RNU6-524P-201ENST00000384270 107 ntBASIC-3.56□□□□□ -2.98
CCDC18Q5T9S5 CYCSP46-201ENST00000423569 204 ntBASIC-3.56□□□□□ -2.98
CCDC18Q5T9S5 EIF1P2-201ENST00000428233 350 ntBASIC-3.56□□□□□ -2.98
CCDC18Q5T9S5 AC090616.4-201ENST00000448026 115 ntBASIC-3.56□□□□□ -2.98
CCDC18Q5T9S5 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-3.56□□□□□ -2.98
CCDC18Q5T9S5 UBE2V2P2-201ENST00000587677 504 ntBASIC-3.56□□□□□ -2.98
CCDC18Q5T9S5 SNORD113-7-201ENST00000363762 77 ntBASIC-3.57□□□□□ -2.98
CCDC18Q5T9S5 SNORD116-12-201ENST00000384468 92 ntBASIC-3.57□□□□□ -2.98
CCDC18Q5T9S5 RNU6-790P-201ENST00000384479 105 ntBASIC-3.57□□□□□ -2.98
CCDC18Q5T9S5 MTND3P1-201ENST00000441336 220 ntBASIC-3.57□□□□□ -2.98
CCDC18Q5T9S5 MIR2113-201ENST00000459007 91 ntBASIC-3.57□□□□□ -2.98
CCDC18Q5T9S5 RNU4-50P-201ENST00000364361 141 ntBASIC-3.58□□□□□ -2.98
CCDC18Q5T9S5 Y_RNA.405-201ENST00000383979 100 ntBASIC-3.58□□□□□ -2.98
CCDC18Q5T9S5 Y_RNA.451-201ENST00000384200 100 ntBASIC-3.58□□□□□ -2.98
CCDC18Q5T9S5 Y_RNA.524-201ENST00000384564 100 ntBASIC-3.58□□□□□ -2.98
CCDC18Q5T9S5 Y_RNA.561-201ENST00000384694 100 ntBASIC-3.58□□□□□ -2.98
CCDC18Q5T9S5 PMCHL1-202ENST00000423102 261 ntBASIC-3.58□□□□□ -2.98
CCDC18Q5T9S5 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-3.58□□□□□ -2.98
CCDC18Q5T9S5 AL008718.3-201ENST00000610217 321 ntBASIC-3.58□□□□□ -2.98
CCDC18Q5T9S5 Y_RNA.75-201ENST00000362927 97 ntBASIC-3.59□□□□□ -2.98
CCDC18Q5T9S5 RNU6-54P-201ENST00000365563 107 ntBASIC-3.59□□□□□ -2.98
CCDC18Q5T9S5 RNU6-903P-201ENST00000391270 109 ntBASIC-3.59□□□□□ -2.98
CCDC18Q5T9S5 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-3.59□□□□□ -2.98
CCDC18Q5T9S5 MTND3P7-201ENST00000474435 343 ntBASIC-3.59□□□□□ -2.98
CCDC18Q5T9S5 Y_RNA.665-201ENST00000516177 98 ntBASIC-3.59□□□□□ -2.98
CCDC18Q5T9S5 MIR5583-1-201ENST00000580941 59 ntBASIC-3.59□□□□□ -2.98
CCDC18Q5T9S5 MIR3123-201ENST00000583417 75 ntBASIC-3.59□□□□□ -2.98
CCDC18Q5T9S5 Z84480.1-201ENST00000605131 311 ntBASIC-3.59□□□□□ -2.98
CCDC18Q5T9S5 SNORD115-22-201ENST00000364456 82 ntBASIC-3.6□□□□□ -2.99
CCDC18Q5T9S5 UBE2V1P12-201ENST00000503954 474 ntBASIC-3.6□□□□□ -2.99
CCDC18Q5T9S5 RNU6-693P-201ENST00000516134 107 ntBASIC-3.6□□□□□ -2.99
CCDC18Q5T9S5 AL121895.2-201ENST00000619558 447 ntBASIC-3.6□□□□□ -2.99
CCDC18Q5T9S5 Y_RNA.366-201ENST00000365540 102 ntBASIC-3.6□□□□□ -2.99
CCDC18Q5T9S5 SNORD116-9-201ENST00000384000 95 ntBASIC-3.6□□□□□ -2.99
CCDC18Q5T9S5 SNORD116-3-201ENST00000384287 95 ntBASIC-3.6□□□□□ -2.99
CCDC18Q5T9S5 SNORD116-8-201ENST00000384365 95 ntBASIC-3.6□□□□□ -2.99
CCDC18Q5T9S5 SNORD116-7-201ENST00000384404 95 ntBASIC-3.6□□□□□ -2.99
CCDC18Q5T9S5 SNORD116-5-201ENST00000384462 95 ntBASIC-3.6□□□□□ -2.99
CCDC18Q5T9S5 Y_RNA.501-201ENST00000384467 103 ntBASIC-3.6□□□□□ -2.99
CCDC18Q5T9S5 MIR519A1-201ENST00000385257 85 ntBASIC-3.6□□□□□ -2.99
CCDC18Q5T9S5 Y_RNA.587-201ENST00000391210 103 ntBASIC-3.6□□□□□ -2.99
CCDC18Q5T9S5 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-3.6□□□□□ -2.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms