Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ELOCP32-201ENST00000548625 324 ntBASIC-2.37□□□□□ -2.79
CCDC58Q4VC31 MIR376A2-201ENST00000636782 80 ntBASIC-2.37□□□□□ -2.79
CCDC58Q4VC31 RNU6-254P-201ENST00000363377 107 ntBASIC-2.38□□□□□ -2.79
CCDC58Q4VC31 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.38□□□□□ -2.79
CCDC58Q4VC31 RNU6-746P-201ENST00000384112 109 ntBASIC-2.38□□□□□ -2.79
CCDC58Q4VC31 Y_RNA.446-201ENST00000384178 104 ntBASIC-2.38□□□□□ -2.79
CCDC58Q4VC31 RNU2-14P-201ENST00000411053 191 ntBASIC-2.38□□□□□ -2.79
CCDC58Q4VC31 SNORD2-201ENST00000459163 69 ntBASIC-2.38□□□□□ -2.79
CCDC58Q4VC31 RNA5SP272-201ENST00000516095 111 ntBASIC-2.38□□□□□ -2.79
CCDC58Q4VC31 AC100767.1-201ENST00000528178 123 ntBASIC-2.38□□□□□ -2.79
CCDC58Q4VC31 AL021368.1-201ENST00000607490 540 ntBASIC-2.38□□□□□ -2.79
CCDC58Q4VC31 Y_RNA.119-201ENST00000363301 96 ntBASIC-2.39□□□□□ -2.79
CCDC58Q4VC31 RNU6-248P-201ENST00000410720 107 ntBASIC-2.39□□□□□ -2.79
CCDC58Q4VC31 RNU7-149P-201ENST00000516739 59 ntBASIC-2.39□□□□□ -2.79
CCDC58Q4VC31 AC007012.1-201ENST00000567192 175 ntBASIC-2.39□□□□□ -2.79
CCDC58Q4VC31 UBE2V2P2-201ENST00000587677 504 ntBASIC-2.39□□□□□ -2.79
CCDC58Q4VC31 MIR342-201ENST00000362212 99 ntBASIC-2.4□□□□□ -2.79
CCDC58Q4VC31 Y_RNA.14-201ENST00000362415 103 ntBASIC-2.4□□□□□ -2.79
CCDC58Q4VC31 Y_RNA.634-201ENST00000364811 113 ntBASIC-2.4□□□□□ -2.79
CCDC58Q4VC31 Y_RNA.562-201ENST00000384695 113 ntBASIC-2.4□□□□□ -2.79
CCDC58Q4VC31 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.4□□□□□ -2.79
CCDC58Q4VC31 MIR5701-3-201ENST00000578890 82 ntBASIC-2.4□□□□□ -2.79
CCDC58Q4VC31 MIR5701-1-201ENST00000585138 82 ntBASIC-2.4□□□□□ -2.79
CCDC58Q4VC31 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-2.4□□□□□ -2.79
CCDC58Q4VC31 MIR5701-2-201ENST00000615634 82 ntBASIC-2.4□□□□□ -2.79
CCDC58Q4VC31 snoU2_19.2-201ENST00000363024 80 ntBASIC-2.41□□□□□ -2.8
CCDC58Q4VC31 MIR582-201ENST00000365731 98 ntBASIC-2.41□□□□□ -2.8
CCDC58Q4VC31 RNY4P36-201ENST00000391116 96 ntBASIC-2.41□□□□□ -2.8
CCDC58Q4VC31 AL590004.1-201ENST00000405321 300 ntBASIC-2.41□□□□□ -2.8
CCDC58Q4VC31 AF228730.4-201ENST00000421457 183 ntBASIC-2.41□□□□□ -2.8
CCDC58Q4VC31 snoU109.3-201ENST00000459477 145 ntBASIC-2.41□□□□□ -2.8
CCDC58Q4VC31 SCARNA17.3-201ENST00000516381 125 ntBASIC-2.41□□□□□ -2.8
CCDC58Q4VC31 RNU6-704P-201ENST00000364162 103 ntBASIC-2.42□□□□□ -2.8
CCDC58Q4VC31 MIR548A2-201ENST00000384956 97 ntBASIC-2.42□□□□□ -2.8
CCDC58Q4VC31 RNU6-1246P-201ENST00000391064 107 ntBASIC-2.42□□□□□ -2.8
CCDC58Q4VC31 SNORA36B-201ENST00000410438 131 ntBASIC-2.42□□□□□ -2.8
CCDC58Q4VC31 MIR1468-201ENST00000410600 86 ntBASIC-2.42□□□□□ -2.8
CCDC58Q4VC31 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-2.42□□□□□ -2.8
CCDC58Q4VC31 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-2.42□□□□□ -2.8
CCDC58Q4VC31 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-2.42□□□□□ -2.8
CCDC58Q4VC31 RNU6-693P-201ENST00000516134 107 ntBASIC-2.42□□□□□ -2.8
CCDC58Q4VC31 MIR3913-1-201ENST00000577744 102 ntBASIC-2.42□□□□□ -2.8
CCDC58Q4VC31 RNU6-874P-201ENST00000362390 105 ntBASIC-2.43□□□□□ -2.8
CCDC58Q4VC31 RNA5SP26-201ENST00000362406 119 ntBASIC-2.43□□□□□ -2.8
CCDC58Q4VC31 Y_RNA.65-201ENST00000362846 100 ntBASIC-2.43□□□□□ -2.8
CCDC58Q4VC31 Y_RNA.447-201ENST00000384184 113 ntBASIC-2.43□□□□□ -2.8
CCDC58Q4VC31 AC098826.2-201ENST00000452011 651 ntBASIC-2.43□□□□□ -2.8
CCDC58Q4VC31 RNU6-470P-201ENST00000515954 104 ntBASIC-2.43□□□□□ -2.8
CCDC58Q4VC31 MIR6841-201ENST00000637129 72 ntBASIC-2.43□□□□□ -2.8
CCDC58Q4VC31 RNU6-1301P-201ENST00000362724 104 ntBASIC-2.44□□□□□ -2.8
CCDC58Q4VC31 RNU6-164P-201ENST00000364604 103 ntBASIC-2.44□□□□□ -2.8
CCDC58Q4VC31 Y_RNA.366-201ENST00000365540 102 ntBASIC-2.44□□□□□ -2.8
CCDC58Q4VC31 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.44□□□□□ -2.8
CCDC58Q4VC31 Y_RNA.437-201ENST00000384113 113 ntBASIC-2.44□□□□□ -2.8
CCDC58Q4VC31 Y_RNA.440-201ENST00000384120 114 ntBASIC-2.44□□□□□ -2.8
CCDC58Q4VC31 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.44□□□□□ -2.8
CCDC58Q4VC31 AC083904.1-201ENST00000487828 231 ntBASIC-2.44□□□□□ -2.8
CCDC58Q4VC31 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-2.44□□□□□ -2.8
CCDC58Q4VC31 SNORD63.1-201ENST00000516178 80 ntBASIC-2.44□□□□□ -2.8
CCDC58Q4VC31 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.44□□□□□ -2.8
CCDC58Q4VC31 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.44□□□□□ -2.8
CCDC58Q4VC31 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.45□□□□□ -2.8
CCDC58Q4VC31 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.45□□□□□ -2.8
CCDC58Q4VC31 Y_RNA.328-201ENST00000365208 113 ntBASIC-2.45□□□□□ -2.8
CCDC58Q4VC31 SNORA51.5-201ENST00000384126 131 ntBASIC-2.45□□□□□ -2.8
CCDC58Q4VC31 MIR514A2-201ENST00000385131 88 ntBASIC-2.45□□□□□ -2.8
CCDC58Q4VC31 MIR514A3-201ENST00000385132 88 ntBASIC-2.45□□□□□ -2.8
CCDC58Q4VC31 MIR548E-201ENST00000408287 88 ntBASIC-2.45□□□□□ -2.8
CCDC58Q4VC31 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-2.45□□□□□ -2.8
CCDC58Q4VC31 MIR2113-201ENST00000459007 91 ntBASIC-2.45□□□□□ -2.8
CCDC58Q4VC31 Y_RNA.653-201ENST00000459091 95 ntBASIC-2.45□□□□□ -2.8
CCDC58Q4VC31 RNU6-1170P-201ENST00000515974 106 ntBASIC-2.45□□□□□ -2.8
CCDC58Q4VC31 AC145350.1-201ENST00000567426 208 ntBASIC-2.45□□□□□ -2.8
CCDC58Q4VC31 MIR4509-3-201ENST00000578671 94 ntBASIC-2.45□□□□□ -2.8
CCDC58Q4VC31 MIR4509-2-201ENST00000583920 94 ntBASIC-2.45□□□□□ -2.8
CCDC58Q4VC31 MIR4509-1-201ENST00000618224 94 ntBASIC-2.45□□□□□ -2.8
CCDC58Q4VC31 MIR335-201ENST00000362173 94 ntBASIC-2.46□□□□□ -2.8
CCDC58Q4VC31 RNU6-522P-201ENST00000364497 107 ntBASIC-2.46□□□□□ -2.8
CCDC58Q4VC31 SNORA62.4-201ENST00000365504 151 ntBASIC-2.47□□□□□ -2.8
CCDC58Q4VC31 RNU6-524P-201ENST00000384270 107 ntBASIC-2.47□□□□□ -2.8
CCDC58Q4VC31 UBE2V1P12-201ENST00000503954 474 ntBASIC-2.47□□□□□ -2.8
CCDC58Q4VC31 RN7SKP299-201ENST00000606679 301 ntBASIC-2.47□□□□□ -2.8
CCDC58Q4VC31 MIR6773-201ENST00000612812 74 ntBASIC-2.47□□□□□ -2.8
CCDC58Q4VC31 RNU6-306P-201ENST00000384617 107 ntBASIC-2.48□□□□□ -2.81
CCDC58Q4VC31 SNORA20-201ENST00000384662 132 ntBASIC-2.48□□□□□ -2.81
CCDC58Q4VC31 MIRLET7B-201ENST00000385140 83 ntBASIC-2.48□□□□□ -2.81
CCDC58Q4VC31 RNU7-195P-201ENST00000458793 62 ntBASIC-2.48□□□□□ -2.81
CCDC58Q4VC31 MIR4464-201ENST00000580818 92 ntBASIC-2.48□□□□□ -2.81
CCDC58Q4VC31 AC098479.1-201ENST00000609225 154 ntBASIC-2.48□□□□□ -2.81
CCDC58Q4VC31 AL669831.3-213ENST00000636676 183 ntBASIC-2.48□□□□□ -2.81
CCDC58Q4VC31 SNORA22.1-201ENST00000362701 134 ntBASIC-2.49□□□□□ -2.81
CCDC58Q4VC31 Y_RNA.381-201ENST00000365666 102 ntBASIC-2.49□□□□□ -2.81
CCDC58Q4VC31 RNU6-429P-201ENST00000384582 108 ntBASIC-2.49□□□□□ -2.81
CCDC58Q4VC31 MIR519A1-201ENST00000385257 85 ntBASIC-2.49□□□□□ -2.81
CCDC58Q4VC31 MTND3P16-201ENST00000452205 344 ntBASIC-2.49□□□□□ -2.81
CCDC58Q4VC31 RNU7-79P-201ENST00000516082 62 ntBASIC-2.49□□□□□ -2.81
CCDC58Q4VC31 AC005357.1-201ENST00000588399 301 ntBASIC-2.49□□□□□ -2.81
CCDC58Q4VC31 AC024933.1-201ENST00000608472 348 ntBASIC-2.49□□□□□ -2.81
CCDC58Q4VC31 Y_RNA.48-201ENST00000362710 103 ntBASIC-2.5□□□□□ -2.81
CCDC58Q4VC31 Y_RNA.72-201ENST00000362894 103 ntBASIC-2.5□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 197.4 ms