Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 AL596211.1-201ENST00000569873 2277 ntBASIC1.25□□□□□ -2.21
TRIM60Q495X7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
TRIM60Q495X7 AC008163.1-202ENST00000636004 2889 ntBASIC1.25□□□□□ -2.21
TRIM60Q495X7 Y_RNA.374-201ENST00000365606 101 ntBASIC1.24□□□□□ -2.21
TRIM60Q495X7 SNORA75.2-201ENST00000391138 150 ntBASIC1.24□□□□□ -2.21
TRIM60Q495X7 SNORA75.3-201ENST00000391231 150 ntBASIC1.24□□□□□ -2.21
TRIM60Q495X7 MIR1185-1-201ENST00000408598 86 ntBASIC1.24□□□□□ -2.21
TRIM60Q495X7 RNA5SP261-201ENST00000410536 106 ntBASIC1.24□□□□□ -2.21
TRIM60Q495X7 AP000753.3-201ENST00000604083 169 ntBASIC1.24□□□□□ -2.21
TRIM60Q495X7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TRIM60Q495X7 MIR373-201ENST00000362273 69 ntBASIC1.23□□□□□ -2.21
TRIM60Q495X7 SNORA1.1-201ENST00000364671 133 ntBASIC1.23□□□□□ -2.21
TRIM60Q495X7 Y_RNA.272-201ENST00000364696 102 ntBASIC1.23□□□□□ -2.21
TRIM60Q495X7 Y_RNA.363-201ENST00000365529 113 ntBASIC1.23□□□□□ -2.21
TRIM60Q495X7 RNU6-1336P-201ENST00000383886 109 ntBASIC1.23□□□□□ -2.21
TRIM60Q495X7 RNU5E-9P-201ENST00000411164 104 ntBASIC1.23□□□□□ -2.21
TRIM60Q495X7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.23□□□□□ -2.21
TRIM60Q495X7 RNU7-21P-201ENST00000459430 62 ntBASIC1.23□□□□□ -2.21
TRIM60Q495X7 MIR3646-201ENST00000578301 84 ntBASIC1.23□□□□□ -2.21
TRIM60Q495X7 DNAJC19P2-201ENST00000593340 302 ntBASIC1.23□□□□□ -2.21
TRIM60Q495X7 AC098479.1-201ENST00000609225 154 ntBASIC1.23□□□□□ -2.21
TRIM60Q495X7 Y_RNA.150-201ENST00000363562 102 ntBASIC1.22□□□□□ -2.21
TRIM60Q495X7 SNORA20-201ENST00000384662 132 ntBASIC1.22□□□□□ -2.21
TRIM60Q495X7 SNORD38B-201ENST00000384690 67 ntBASIC1.22□□□□□ -2.21
TRIM60Q495X7 RNU6-1135P-201ENST00000411083 103 ntBASIC1.22□□□□□ -2.21
TRIM60Q495X7 POLR2J4-204ENST00000418424 324 ntBASIC1.22□□□□□ -2.21
TRIM60Q495X7 AC074198.2-201ENST00000508153 258 ntBASIC1.22□□□□□ -2.21
TRIM60Q495X7 RNU6-1149P-201ENST00000516810 97 ntBASIC1.22□□□□□ -2.21
TRIM60Q495X7 AC211469.2-201ENST00000605461 205 ntBASIC1.22□□□□□ -2.21
TRIM60Q495X7 AC027335.2-201ENST00000624030 375 ntBASIC1.22□□□□□ -2.21
TRIM60Q495X7 SNORD38B-202ENST00000625943 69 ntBASIC1.22□□□□□ -2.21
TRIM60Q495X7 MIR376A2-201ENST00000636782 80 ntBASIC1.22□□□□□ -2.21
TRIM60Q495X7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.21
TRIM60Q495X7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.21□□□□□ -2.22
TRIM60Q495X7 Y_RNA.441-201ENST00000384123 112 ntBASIC1.21□□□□□ -2.22
TRIM60Q495X7 RNU6-939P-201ENST00000384634 107 ntBASIC1.21□□□□□ -2.22
TRIM60Q495X7 AP003716.2-201ENST00000528260 108 ntBASIC1.21□□□□□ -2.22
TRIM60Q495X7 MIR3152-201ENST00000579801 74 ntBASIC1.21□□□□□ -2.22
TRIM60Q495X7 RN7SL793P-201ENST00000583259 296 ntBASIC1.21□□□□□ -2.22
TRIM60Q495X7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.21□□□□□ -2.22
TRIM60Q495X7 AC104465.1-201ENST00000611365 139 ntBASIC1.21□□□□□ -2.22
TRIM60Q495X7 FTX_2.1-201ENST00000618816 94 ntBASIC1.21□□□□□ -2.22
TRIM60Q495X7 AC091932.4-201ENST00000623386 200 ntBASIC1.21□□□□□ -2.22
TRIM60Q495X7 SNORD18B-201ENST00000365659 72 ntBASIC1.2□□□□□ -2.22
TRIM60Q495X7 SNORA2B-201ENST00000384583 137 ntBASIC1.2□□□□□ -2.22
TRIM60Q495X7 RNY1P4-201ENST00000384595 115 ntBASIC1.2□□□□□ -2.22
TRIM60Q495X7 MIR618-201ENST00000385287 98 ntBASIC1.2□□□□□ -2.22
TRIM60Q495X7 RNU6-913P-201ENST00000390913 95 ntBASIC1.2□□□□□ -2.22
TRIM60Q495X7 RNU6-588P-201ENST00000410281 105 ntBASIC1.2□□□□□ -2.22
TRIM60Q495X7 AC002429.1-201ENST00000437672 148 ntBASIC1.2□□□□□ -2.22
TRIM60Q495X7 AL392103.1-201ENST00000447000 198 ntBASIC1.2□□□□□ -2.22
TRIM60Q495X7 AC023827.1-201ENST00000569247 97 ntBASIC1.2□□□□□ -2.22
TRIM60Q495X7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.2□□□□□ -2.22
TRIM60Q495X7 AC131055.1-201ENST00000584626 316 ntBASIC1.2□□□□□ -2.22
TRIM60Q495X7 MIR6516-201ENST00000630554 81 ntBASIC1.2□□□□□ -2.22
TRIM60Q495X7 Y_RNA.8-201ENST00000362353 102 ntBASIC1.19□□□□□ -2.22
TRIM60Q495X7 RNU6-1082P-201ENST00000364574 107 ntBASIC1.19□□□□□ -2.22
TRIM60Q495X7 RNU6-449P-201ENST00000383914 107 ntBASIC1.19□□□□□ -2.22
TRIM60Q495X7 RNU6-994P-201ENST00000410507 111 ntBASIC1.19□□□□□ -2.22
TRIM60Q495X7 RNU2-64P-201ENST00000411315 191 ntBASIC1.19□□□□□ -2.22
TRIM60Q495X7 MTATP6P21-201ENST00000440681 189 ntBASIC1.19□□□□□ -2.22
TRIM60Q495X7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.19□□□□□ -2.22
TRIM60Q495X7 AL020996.3-201ENST00000606617 222 ntBASIC1.19□□□□□ -2.22
TRIM60Q495X7 MTND5P32-201ENST00000560711 1802 ntBASIC1.19□□□□□ -2.22
TRIM60Q495X7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
TRIM60Q495X7 MIR1302-7-201ENST00000408841 72 ntBASIC1.18□□□□□ -2.22
TRIM60Q495X7 RNU7-121P-201ENST00000516604 62 ntBASIC1.18□□□□□ -2.22
TRIM60Q495X7 RNA5SP404-201ENST00000517118 132 ntBASIC1.18□□□□□ -2.22
TRIM60Q495X7 MIR3658-201ENST00000636291 56 ntBASIC1.18□□□□□ -2.22
TRIM60Q495X7 Y_RNA.52-201ENST00000362760 96 ntBASIC1.17□□□□□ -2.22
TRIM60Q495X7 RNU6-654P-201ENST00000364373 107 ntBASIC1.17□□□□□ -2.22
TRIM60Q495X7 SNORD116-18-201ENST00000383961 92 ntBASIC1.17□□□□□ -2.22
TRIM60Q495X7 RNU6-886P-201ENST00000384319 105 ntBASIC1.17□□□□□ -2.22
TRIM60Q495X7 MIR216A-201ENST00000385063 110 ntBASIC1.17□□□□□ -2.22
TRIM60Q495X7 RNU6-613P-201ENST00000410412 108 ntBASIC1.17□□□□□ -2.22
TRIM60Q495X7 RPS3AP1-201ENST00000413190 320 ntBASIC1.17□□□□□ -2.22
TRIM60Q495X7 HMGN1P33-201ENST00000432945 451 ntBASIC1.17□□□□□ -2.22
TRIM60Q495X7 AC067940.1-201ENST00000458411 300 ntBASIC1.17□□□□□ -2.22
TRIM60Q495X7 MIR4264-201ENST00000583520 66 ntBASIC1.17□□□□□ -2.22
TRIM60Q495X7 RNU6-151P-201ENST00000364158 107 ntBASIC1.16□□□□□ -2.22
TRIM60Q495X7 SNORD113.3-201ENST00000364630 78 ntBASIC1.16□□□□□ -2.22
TRIM60Q495X7 RNU4-11P-201ENST00000365287 132 ntBASIC1.16□□□□□ -2.22
TRIM60Q495X7 MT-TN-201ENST00000387400 73 ntBASIC1.16□□□□□ -2.22
TRIM60Q495X7 RNU6-205P-201ENST00000390858 107 ntBASIC1.16□□□□□ -2.22
TRIM60Q495X7 Y_RNA.584-201ENST00000391090 114 ntBASIC1.16□□□□□ -2.22
TRIM60Q495X7 SNORD111-201ENST00000408139 94 ntBASIC1.16□□□□□ -2.22
TRIM60Q495X7 RNA5SP95-201ENST00000410319 137 ntBASIC1.16□□□□□ -2.22
TRIM60Q495X7 MIR8055-201ENST00000610739 97 ntBASIC1.16□□□□□ -2.22
TRIM60Q495X7 Z97988.1-201ENST00000637697 135 ntBASIC1.16□□□□□ -2.22
TRIM60Q495X7 Y_RNA.555-201ENST00000384673 110 ntBASIC1.15□□□□□ -2.23
TRIM60Q495X7 MIR942-201ENST00000401111 86 ntBASIC1.15□□□□□ -2.23
TRIM60Q495X7 MIR513C-201ENST00000401352 84 ntBASIC1.15□□□□□ -2.23
TRIM60Q495X7 RNU7-45P-201ENST00000459460 63 ntBASIC1.15□□□□□ -2.23
TRIM60Q495X7 SCARNA15-202ENST00000516881 127 ntBASIC1.15□□□□□ -2.23
TRIM60Q495X7 AC112693.2-201ENST00000556538 232 ntBASIC1.15□□□□□ -2.23
TRIM60Q495X7 CYP3A137P-201ENST00000562436 69 ntBASIC1.15□□□□□ -2.23
TRIM60Q495X7 MIR3973-201ENST00000579824 107 ntBASIC1.15□□□□□ -2.23
TRIM60Q495X7 SNORD114-21-201ENST00000606412 72 ntBASIC1.15□□□□□ -2.23
TRIM60Q495X7 RNU6-125P-201ENST00000384505 107 ntBASIC1.14□□□□□ -2.23
TRIM60Q495X7 MIR19B1-201ENST00000384829 87 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms