Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 HSPE1P25-201ENST00000455484 251 ntBASIC-0.35□□□□□ -2.47
ZNF404Q494X3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.35□□□□□ -2.47
ZNF404Q494X3 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.35□□□□□ -2.47
ZNF404Q494X3 RNU6-180P-201ENST00000516697 61 ntBASIC-0.35□□□□□ -2.47
ZNF404Q494X3 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.35□□□□□ -2.47
ZNF404Q494X3 MIR5706-201ENST00000579841 80 ntBASIC-0.35□□□□□ -2.47
ZNF404Q494X3 MIR376A1-201ENST00000616574 68 ntBASIC-0.35□□□□□ -2.47
ZNF404Q494X3 RNU4-90P-201ENST00000362773 141 ntBASIC-0.36□□□□□ -2.47
ZNF404Q494X3 RNA5SP163-201ENST00000410304 99 ntBASIC-0.36□□□□□ -2.47
ZNF404Q494X3 PMCHL1-202ENST00000423102 261 ntBASIC-0.36□□□□□ -2.47
ZNF404Q494X3 RNU7-152P-201ENST00000458982 64 ntBASIC-0.36□□□□□ -2.47
ZNF404Q494X3 RNU6-277P-201ENST00000516272 106 ntBASIC-0.36□□□□□ -2.47
ZNF404Q494X3 SNORA25.16-201ENST00000516741 121 ntBASIC-0.36□□□□□ -2.47
ZNF404Q494X3 MIR5688-201ENST00000580619 83 ntBASIC-0.36□□□□□ -2.47
ZNF404Q494X3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.36□□□□□ -2.47
ZNF404Q494X3 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.36□□□□□ -2.47
ZNF404Q494X3 AC007485.1-201ENST00000616755 206 ntBASIC-0.36□□□□□ -2.47
ZNF404Q494X3 MIR1302-1-201ENST00000637932 143 ntBASIC-0.36□□□□□ -2.47
ZNF404Q494X3 RNU6-726P-201ENST00000364680 107 ntBASIC-0.37□□□□□ -2.47
ZNF404Q494X3 RNU6-46P-201ENST00000383860 107 ntBASIC-0.37□□□□□ -2.47
ZNF404Q494X3 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.37□□□□□ -2.47
ZNF404Q494X3 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.37□□□□□ -2.47
ZNF404Q494X3 RNU7-80P-201ENST00000459562 61 ntBASIC-0.37□□□□□ -2.47
ZNF404Q494X3 RNU6-475P-201ENST00000516073 104 ntBASIC-0.37□□□□□ -2.47
ZNF404Q494X3 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.37□□□□□ -2.47
ZNF404Q494X3 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.37□□□□□ -2.47
ZNF404Q494X3 AC006006.1-201ENST00000603082 144 ntBASIC-0.37□□□□□ -2.47
ZNF404Q494X3 AL162376.1-201ENST00000624117 175 ntBASIC-0.37□□□□□ -2.47
ZNF404Q494X3 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.38□□□□□ -2.47
ZNF404Q494X3 RNA5SP245-201ENST00000364239 121 ntBASIC-0.38□□□□□ -2.47
ZNF404Q494X3 RNU4-10P-201ENST00000364383 140 ntBASIC-0.38□□□□□ -2.47
ZNF404Q494X3 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.38□□□□□ -2.47
ZNF404Q494X3 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.38□□□□□ -2.47
ZNF404Q494X3 SNORA20-201ENST00000384662 132 ntBASIC-0.38□□□□□ -2.47
ZNF404Q494X3 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.38□□□□□ -2.47
ZNF404Q494X3 AC098614.3-201ENST00000438957 440 ntBASIC-0.38□□□□□ -2.47
ZNF404Q494X3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-0.38□□□□□ -2.47
ZNF404Q494X3 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.38□□□□□ -2.47
ZNF404Q494X3 RNU6-507P-201ENST00000516045 100 ntBASIC-0.38□□□□□ -2.47
ZNF404Q494X3 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.38□□□□□ -2.47
ZNF404Q494X3 U7.6-201ENST00000610841 64 ntBASIC-0.38□□□□□ -2.47
ZNF404Q494X3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.38□□□□□ -2.47
ZNF404Q494X3 MIR6841-201ENST00000637129 72 ntBASIC-0.38□□□□□ -2.47
ZNF404Q494X3 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.39□□□□□ -2.47
ZNF404Q494X3 SNORD114-12-201ENST00000365400 75 ntBASIC-0.39□□□□□ -2.47
ZNF404Q494X3 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.39□□□□□ -2.47
ZNF404Q494X3 RNU2-55P-201ENST00000411146 174 ntBASIC-0.39□□□□□ -2.47
ZNF404Q494X3 MTND4LP30-201ENST00000454092 297 ntBASIC-0.39□□□□□ -2.47
ZNF404Q494X3 AC091932.4-201ENST00000623386 200 ntBASIC-0.39□□□□□ -2.47
ZNF404Q494X3 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.4□□□□□ -2.47
ZNF404Q494X3 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.4□□□□□ -2.47
ZNF404Q494X3 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.4□□□□□ -2.47
ZNF404Q494X3 MIR106A-201ENST00000384870 81 ntBASIC-0.4□□□□□ -2.47
ZNF404Q494X3 RNU6-976P-201ENST00000516086 111 ntBASIC-0.4□□□□□ -2.47
ZNF404Q494X3 RNA5SP153-201ENST00000516498 76 ntBASIC-0.4□□□□□ -2.47
ZNF404Q494X3 RNU6-320P-201ENST00000516511 106 ntBASIC-0.4□□□□□ -2.47
ZNF404Q494X3 IGLVI-20-201ENST00000519296 130 ntBASIC-0.4□□□□□ -2.47
ZNF404Q494X3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.4□□□□□ -2.47
ZNF404Q494X3 MIR3925-201ENST00000584674 77 ntBASIC-0.4□□□□□ -2.47
ZNF404Q494X3 AC097639.2-201ENST00000603159 172 ntBASIC-0.4□□□□□ -2.47
ZNF404Q494X3 AL360085.1-201ENST00000604713 532 ntBASIC-0.4□□□□□ -2.47
ZNF404Q494X3 SNORA70.25-201ENST00000612741 95 ntBASIC-0.4□□□□□ -2.47
ZNF404Q494X3 MIR376A2-201ENST00000636782 80 ntBASIC-0.4□□□□□ -2.47
ZNF404Q494X3 SNORA25.1-201ENST00000362326 128 ntBASIC-0.41□□□□□ -2.48
ZNF404Q494X3 SNORA22.1-201ENST00000362701 134 ntBASIC-0.41□□□□□ -2.48
ZNF404Q494X3 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.41□□□□□ -2.48
ZNF404Q494X3 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.41□□□□□ -2.48
ZNF404Q494X3 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.41□□□□□ -2.48
ZNF404Q494X3 RNY1P13-201ENST00000365030 105 ntBASIC-0.41□□□□□ -2.48
ZNF404Q494X3 RNU6-484P-201ENST00000384016 107 ntBASIC-0.41□□□□□ -2.48
ZNF404Q494X3 SNORA1-201ENST00000384107 130 ntBASIC-0.41□□□□□ -2.48
ZNF404Q494X3 SNORA18-201ENST00000384416 132 ntBASIC-0.41□□□□□ -2.48
ZNF404Q494X3 SNORD115-46-201ENST00000390982 71 ntBASIC-0.41□□□□□ -2.48
ZNF404Q494X3 MIR548L-201ENST00000408303 86 ntBASIC-0.41□□□□□ -2.48
ZNF404Q494X3 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.41□□□□□ -2.48
ZNF404Q494X3 RNU2-60P-201ENST00000517290 128 ntBASIC-0.41□□□□□ -2.48
ZNF404Q494X3 DEFB131E-201ENST00000532329 154 ntBASIC-0.41□□□□□ -2.48
ZNF404Q494X3 MIR4677-201ENST00000584153 80 ntBASIC-0.41□□□□□ -2.48
ZNF404Q494X3 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.41□□□□□ -2.48
ZNF404Q494X3 AC006157.1-201ENST00000611750 366 ntBASIC-0.41□□□□□ -2.48
ZNF404Q494X3 AC093783.1-201ENST00000612976 329 ntBASIC-0.41□□□□□ -2.48
ZNF404Q494X3 AC112487.2-201ENST00000637950 304 ntBASIC-0.41□□□□□ -2.48
ZNF404Q494X3 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.42□□□□□ -2.48
ZNF404Q494X3 RNU6-290P-201ENST00000365212 101 ntBASIC-0.42□□□□□ -2.48
ZNF404Q494X3 SNORA22B-201ENST00000383876 138 ntBASIC-0.42□□□□□ -2.48
ZNF404Q494X3 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.42□□□□□ -2.48
ZNF404Q494X3 RNU6-662P-201ENST00000384253 104 ntBASIC-0.42□□□□□ -2.48
ZNF404Q494X3 SNORA8.3-201ENST00000384679 139 ntBASIC-0.42□□□□□ -2.48
ZNF404Q494X3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.42□□□□□ -2.48
ZNF404Q494X3 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.42□□□□□ -2.48
ZNF404Q494X3 AL731563.1-201ENST00000442202 214 ntBASIC-0.42□□□□□ -2.48
ZNF404Q494X3 AC244505.6-201ENST00000452829 130 ntBASIC-0.42□□□□□ -2.48
ZNF404Q494X3 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.42□□□□□ -2.48
ZNF404Q494X3 CR383656.4-201ENST00000546909 122 ntBASIC-0.42□□□□□ -2.48
ZNF404Q494X3 AC138749.4-201ENST00000563970 127 ntBASIC-0.42□□□□□ -2.48
ZNF404Q494X3 MIR378D2-201ENST00000580636 98 ntBASIC-0.42□□□□□ -2.48
ZNF404Q494X3 MIR5197-201ENST00000583721 112 ntBASIC-0.42□□□□□ -2.48
ZNF404Q494X3 AC037487.3-201ENST00000606668 112 ntBASIC-0.42□□□□□ -2.48
ZNF404Q494X3 AL008718.3-201ENST00000610217 321 ntBASIC-0.42□□□□□ -2.48
ZNF404Q494X3 uc_338.28-201ENST00000612082 187 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 409.1 ms