Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 U2.14-201ENST00000615943 113 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 Y_RNA.789-201ENST00000622480 102 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 MIR6717-201ENST00000622747 73 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 RNU6-797P-201ENST00000363101 109 ntBASIC0.28□□□□□ -2.36
SMARCB1Q12824 Y_RNA.202-201ENST00000364083 110 ntBASIC0.28□□□□□ -2.36
SMARCB1Q12824 RNU6-1189P-201ENST00000383958 107 ntBASIC0.28□□□□□ -2.36
SMARCB1Q12824 Y_RNA.410-201ENST00000383992 113 ntBASIC0.28□□□□□ -2.36
SMARCB1Q12824 Y_RNA.483-201ENST00000384380 101 ntBASIC0.28□□□□□ -2.36
SMARCB1Q12824 MT-TW-201ENST00000387382 68 ntBASIC0.28□□□□□ -2.36
SMARCB1Q12824 RNU6-381P-201ENST00000391259 108 ntBASIC0.28□□□□□ -2.36
SMARCB1Q12824 RNU2-55P-201ENST00000411146 174 ntBASIC0.28□□□□□ -2.36
SMARCB1Q12824 RNA5SP153-201ENST00000516498 76 ntBASIC0.28□□□□□ -2.36
SMARCB1Q12824 AL442663.2-201ENST00000554385 511 ntBASIC0.28□□□□□ -2.36
SMARCB1Q12824 MIR4643-201ENST00000577473 78 ntBASIC0.28□□□□□ -2.36
SMARCB1Q12824 AL442067.1-201ENST00000613261 223 ntBASIC0.28□□□□□ -2.36
SMARCB1Q12824 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.27□□□□□ -2.37
SMARCB1Q12824 RNU6-653P-201ENST00000363074 106 ntBASIC0.27□□□□□ -2.37
SMARCB1Q12824 MIR616-201ENST00000385293 97 ntBASIC0.27□□□□□ -2.37
SMARCB1Q12824 RNU6-679P-201ENST00000391003 106 ntBASIC0.27□□□□□ -2.37
SMARCB1Q12824 MIR1257-201ENST00000408490 117 ntBASIC0.27□□□□□ -2.37
SMARCB1Q12824 Y_RNA.604-201ENST00000410574 102 ntBASIC0.27□□□□□ -2.37
SMARCB1Q12824 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.27□□□□□ -2.37
SMARCB1Q12824 RNU6-126P-201ENST00000516685 103 ntBASIC0.27□□□□□ -2.37
SMARCB1Q12824 RNA5SP94-201ENST00000516917 108 ntBASIC0.27□□□□□ -2.37
SMARCB1Q12824 RNU7-156P-201ENST00000517214 74 ntBASIC0.27□□□□□ -2.37
SMARCB1Q12824 MIR4282-201ENST00000583613 67 ntBASIC0.27□□□□□ -2.37
SMARCB1Q12824 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
SMARCB1Q12824 Y_RNA.416-201ENST00000384014 113 ntBASIC0.26□□□□□ -2.37
SMARCB1Q12824 RNY3P5-201ENST00000384127 102 ntBASIC0.26□□□□□ -2.37
SMARCB1Q12824 RNU6-364P-201ENST00000384387 107 ntBASIC0.26□□□□□ -2.37
SMARCB1Q12824 Y_RNA.617-201ENST00000410920 90 ntBASIC0.26□□□□□ -2.37
SMARCB1Q12824 AC096949.1-201ENST00000412047 152 ntBASIC0.26□□□□□ -2.37
SMARCB1Q12824 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.26□□□□□ -2.37
SMARCB1Q12824 MIR3129-201ENST00000581095 76 ntBASIC0.26□□□□□ -2.37
SMARCB1Q12824 MIR5197-201ENST00000583721 112 ntBASIC0.26□□□□□ -2.37
SMARCB1Q12824 AC011921.3-201ENST00000605540 361 ntBASIC0.26□□□□□ -2.37
SMARCB1Q12824 MIR8066-201ENST00000617280 78 ntBASIC0.26□□□□□ -2.37
SMARCB1Q12824 AC092634.7-201ENST00000621022 103 ntBASIC0.26□□□□□ -2.37
SMARCB1Q12824 AL365265.1-201ENST00000621045 234 ntBASIC0.26□□□□□ -2.37
SMARCB1Q12824 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
SMARCB1Q12824 RNU4-45P-201ENST00000365469 141 ntBASIC0.25□□□□□ -2.37
SMARCB1Q12824 RNU6-639P-201ENST00000384074 107 ntBASIC0.25□□□□□ -2.37
SMARCB1Q12824 RNU6-472P-201ENST00000384299 107 ntBASIC0.25□□□□□ -2.37
SMARCB1Q12824 MT-TF-201ENST00000387314 71 ntBASIC0.25□□□□□ -2.37
SMARCB1Q12824 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.25□□□□□ -2.37
SMARCB1Q12824 SNORA25.18-201ENST00000607153 114 ntBASIC0.25□□□□□ -2.37
SMARCB1Q12824 MIR8087-201ENST00000612745 78 ntBASIC0.25□□□□□ -2.37
SMARCB1Q12824 AC091932.4-201ENST00000623386 200 ntBASIC0.25□□□□□ -2.37
SMARCB1Q12824 Y_RNA.42-201ENST00000362660 108 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 SNORD44.1-201ENST00000363202 61 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 Y_RNA.199-201ENST00000364014 102 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 Y_RNA.351-201ENST00000365436 96 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 Y_RNA.518-201ENST00000384552 113 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 MIR518A1-201ENST00000385068 85 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 RNU6-1319P-201ENST00000390855 104 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 RNU6-747P-201ENST00000390928 104 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 RNU6-241P-201ENST00000391148 104 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 SNORA26-201ENST00000391286 122 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 RNU6-447P-201ENST00000410293 104 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 RNU6-1118P-201ENST00000410382 104 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 RNU6-1076P-201ENST00000410397 104 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 RNU6-355P-201ENST00000410427 104 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 RNU6-791P-201ENST00000410467 104 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 RNU6-705P-201ENST00000410601 104 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 RNU6-1100P-201ENST00000410691 104 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 RNU6-860P-201ENST00000410860 104 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 RNU6-1217P-201ENST00000411276 104 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 RNU6-785P-201ENST00000411324 104 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 AC108740.1-201ENST00000498629 225 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 SNORA62.5-201ENST00000516634 120 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 MIR3678-201ENST00000578455 94 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 AC023932.2-201ENST00000603176 175 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 U6.90-201ENST00000614007 104 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 AL662814.1-201ENST00000617364 121 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 U6.70-201ENST00000620287 104 ntBASIC0.24□□□□□ -2.37
SMARCB1Q12824 AC090625.1-201ENST00000357130 210 ntBASIC0.23□□□□□ -2.37
SMARCB1Q12824 MIR335-201ENST00000362173 94 ntBASIC0.23□□□□□ -2.37
SMARCB1Q12824 SNORA36.1-201ENST00000363424 132 ntBASIC0.23□□□□□ -2.37
SMARCB1Q12824 RNU6-1227P-201ENST00000383981 107 ntBASIC0.23□□□□□ -2.37
SMARCB1Q12824 SNORA8.2-201ENST00000384372 139 ntBASIC0.23□□□□□ -2.37
SMARCB1Q12824 RNU6-635P-201ENST00000516651 102 ntBASIC0.23□□□□□ -2.37
SMARCB1Q12824 RNU6-448P-201ENST00000517052 107 ntBASIC0.23□□□□□ -2.37
SMARCB1Q12824 AC133485.4-201ENST00000561835 220 ntBASIC0.23□□□□□ -2.37
SMARCB1Q12824 MIR6841-201ENST00000637129 72 ntBASIC0.23□□□□□ -2.37
SMARCB1Q12824 Y_RNA.76-201ENST00000362931 109 ntBASIC0.22□□□□□ -2.37
SMARCB1Q12824 Y_RNA.176-201ENST00000363815 109 ntBASIC0.22□□□□□ -2.37
SMARCB1Q12824 U8.15-201ENST00000390947 134 ntBASIC0.22□□□□□ -2.37
SMARCB1Q12824 MIR548F4-201ENST00000408515 105 ntBASIC0.22□□□□□ -2.37
SMARCB1Q12824 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.22□□□□□ -2.37
SMARCB1Q12824 Y_RNA.590-201ENST00000410140 107 ntBASIC0.22□□□□□ -2.37
SMARCB1Q12824 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.22□□□□□ -2.37
SMARCB1Q12824 SNRPGP12-201ENST00000449481 213 ntBASIC0.22□□□□□ -2.37
SMARCB1Q12824 SNORA25.12-201ENST00000516202 82 ntBASIC0.22□□□□□ -2.37
SMARCB1Q12824 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.22□□□□□ -2.37
SMARCB1Q12824 MIR4431-201ENST00000579990 94 ntBASIC0.22□□□□□ -2.37
SMARCB1Q12824 MIR8062-201ENST00000621515 85 ntBASIC0.22□□□□□ -2.37
SMARCB1Q12824 RNU6-238P-201ENST00000363313 106 ntBASIC0.21□□□□□ -2.38
SMARCB1Q12824 SNORD118-201ENST00000363593 134 ntBASIC0.21□□□□□ -2.38
SMARCB1Q12824 Y_RNA.461-201ENST00000384263 103 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 196.7 ms