Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CD47Q08722 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
CD47Q08722 RNY1-201ENST00000364228 113 ntBASIC0.59□□□□□ -2.31
CD47Q08722 MIR508-201ENST00000384857 115 ntBASIC0.59□□□□□ -2.31
CD47Q08722 MIR588-201ENST00000384900 83 ntBASIC0.59□□□□□ -2.31
CD47Q08722 SNORD105-201ENST00000386910 85 ntBASIC0.59□□□□□ -2.31
CD47Q08722 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.59□□□□□ -2.31
CD47Q08722 AC244098.3-201ENST00000424803 96 ntBASIC0.59□□□□□ -2.31
CD47Q08722 RNU4-71P-201ENST00000516258 113 ntBASIC0.59□□□□□ -2.31
CD47Q08722 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.59□□□□□ -2.31
CD47Q08722 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.59□□□□□ -2.31
CD47Q08722 RMST_2.1-201ENST00000617263 136 ntBASIC0.59□□□□□ -2.31
CD47Q08722 MIR6717-201ENST00000622747 73 ntBASIC0.59□□□□□ -2.31
CD47Q08722 AL596211.1-201ENST00000569873 2277 ntBASIC0.58□□□□□ -2.32
CD47Q08722 Y_RNA.121-201ENST00000363309 113 ntBASIC0.58□□□□□ -2.32
CD47Q08722 RNU6-1292P-201ENST00000383856 107 ntBASIC0.58□□□□□ -2.32
CD47Q08722 RNU6-643P-201ENST00000384018 107 ntBASIC0.58□□□□□ -2.32
CD47Q08722 RNU4-70P-201ENST00000384579 139 ntBASIC0.58□□□□□ -2.32
CD47Q08722 Y_RNA.618-201ENST00000410949 107 ntBASIC0.58□□□□□ -2.32
CD47Q08722 snoU13.2-201ENST00000459201 104 ntBASIC0.58□□□□□ -2.32
CD47Q08722 SNORD116-25-201ENST00000516517 92 ntBASIC0.58□□□□□ -2.32
CD47Q08722 SCARNA15-202ENST00000516881 127 ntBASIC0.58□□□□□ -2.32
CD47Q08722 AC022559.1-201ENST00000520905 205 ntBASIC0.58□□□□□ -2.32
CD47Q08722 MRPS18CP4-201ENST00000535821 231 ntBASIC0.58□□□□□ -2.32
CD47Q08722 AC133485.1-201ENST00000567176 124 ntBASIC0.58□□□□□ -2.32
CD47Q08722 AC138907.6-201ENST00000568401 126 ntBASIC0.58□□□□□ -2.32
CD47Q08722 AC130289.1-201ENST00000577321 73 ntBASIC0.58□□□□□ -2.32
CD47Q08722 AC011195.1-201ENST00000578177 177 ntBASIC0.58□□□□□ -2.32
CD47Q08722 MIR411-201ENST00000362239 96 ntBASIC0.57□□□□□ -2.32
CD47Q08722 RNU6-275P-201ENST00000364910 107 ntBASIC0.57□□□□□ -2.32
CD47Q08722 RNY1P8-201ENST00000383970 114 ntBASIC0.57□□□□□ -2.32
CD47Q08722 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.57□□□□□ -2.32
CD47Q08722 AC025627.3-201ENST00000582078 182 ntBASIC0.57□□□□□ -2.32
CD47Q08722 AC104465.1-201ENST00000611365 139 ntBASIC0.57□□□□□ -2.32
CD47Q08722 MTND5P32-201ENST00000560711 1802 ntBASIC0.57□□□□□ -2.32
CD47Q08722 Y_RNA.200-201ENST00000364018 102 ntBASIC0.56□□□□□ -2.32
CD47Q08722 Y_RNA.274-201ENST00000364714 101 ntBASIC0.56□□□□□ -2.32
CD47Q08722 MIR520F-201ENST00000384824 87 ntBASIC0.56□□□□□ -2.32
CD47Q08722 MIR563-201ENST00000385080 79 ntBASIC0.56□□□□□ -2.32
CD47Q08722 MIR1276-201ENST00000408707 83 ntBASIC0.56□□□□□ -2.32
CD47Q08722 RNU6-1165P-201ENST00000410119 107 ntBASIC0.56□□□□□ -2.32
CD47Q08722 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
CD47Q08722 RNU6-977P-201ENST00000516411 103 ntBASIC0.56□□□□□ -2.32
CD47Q08722 CYP3A137P-201ENST00000562436 69 ntBASIC0.56□□□□□ -2.32
CD47Q08722 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.56□□□□□ -2.32
CD47Q08722 MIR4804-201ENST00000581683 73 ntBASIC0.56□□□□□ -2.32
CD47Q08722 MIR4676-201ENST00000583078 72 ntBASIC0.56□□□□□ -2.32
CD47Q08722 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
CD47Q08722 MIR302B-201ENST00000362188 73 ntBASIC0.55□□□□□ -2.32
CD47Q08722 MIR30D-201ENST00000362283 70 ntBASIC0.55□□□□□ -2.32
CD47Q08722 Y_RNA.75-201ENST00000362927 97 ntBASIC0.55□□□□□ -2.32
CD47Q08722 Y_RNA.83-201ENST00000363005 113 ntBASIC0.55□□□□□ -2.32
CD47Q08722 SNORD114-22-201ENST00000365423 72 ntBASIC0.55□□□□□ -2.32
CD47Q08722 MIR520E-201ENST00000384867 87 ntBASIC0.55□□□□□ -2.32
CD47Q08722 MIR520H-201ENST00000385126 88 ntBASIC0.55□□□□□ -2.32
CD47Q08722 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
CD47Q08722 RNU1-119P-201ENST00000391122 165 ntBASIC0.55□□□□□ -2.32
CD47Q08722 RNU7-56P-201ENST00000458744 62 ntBASIC0.55□□□□□ -2.32
CD47Q08722 RNU6-1219P-201ENST00000516143 112 ntBASIC0.55□□□□□ -2.32
CD47Q08722 RNU6-1149P-201ENST00000516810 97 ntBASIC0.55□□□□□ -2.32
CD47Q08722 AC004812.1-201ENST00000540773 146 ntBASIC0.55□□□□□ -2.32
CD47Q08722 AC009779.6-201ENST00000603972 165 ntBASIC0.55□□□□□ -2.32
CD47Q08722 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.55□□□□□ -2.32
CD47Q08722 MIR8070-201ENST00000616510 88 ntBASIC0.55□□□□□ -2.32
CD47Q08722 Y_RNA.191-201ENST00000363972 113 ntBASIC0.54□□□□□ -2.32
CD47Q08722 RNU4-16P-201ENST00000364737 141 ntBASIC0.54□□□□□ -2.32
CD47Q08722 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
CD47Q08722 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
CD47Q08722 RNU6-1237P-201ENST00000384777 107 ntBASIC0.54□□□□□ -2.32
CD47Q08722 MIR624-201ENST00000385217 97 ntBASIC0.54□□□□□ -2.32
CD47Q08722 RNA5SP127-201ENST00000411051 133 ntBASIC0.54□□□□□ -2.32
CD47Q08722 RPS29P1-201ENST00000465274 159 ntBASIC0.54□□□□□ -2.32
CD47Q08722 COX6CP6-201ENST00000490840 228 ntBASIC0.54□□□□□ -2.32
CD47Q08722 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.54□□□□□ -2.32
CD47Q08722 AC008608.1-201ENST00000603910 127 ntBASIC0.54□□□□□ -2.32
CD47Q08722 AL136317.1-201ENST00000612653 226 ntBASIC0.54□□□□□ -2.32
CD47Q08722 Y_RNA.4-201ENST00000362333 112 ntBASIC0.53□□□□□ -2.32
CD47Q08722 Y_RNA.164-201ENST00000363709 102 ntBASIC0.53□□□□□ -2.32
CD47Q08722 RNU6-1082P-201ENST00000364574 107 ntBASIC0.53□□□□□ -2.32
CD47Q08722 RNU6-768P-201ENST00000384683 107 ntBASIC0.53□□□□□ -2.32
CD47Q08722 RNU6-1319P-201ENST00000390855 104 ntBASIC0.53□□□□□ -2.32
CD47Q08722 RNU6-747P-201ENST00000390928 104 ntBASIC0.53□□□□□ -2.32
CD47Q08722 RNU6-241P-201ENST00000391148 104 ntBASIC0.53□□□□□ -2.32
CD47Q08722 RNA5SP222-201ENST00000411039 105 ntBASIC0.53□□□□□ -2.32
CD47Q08722 RNU6-177P-201ENST00000411257 104 ntBASIC0.53□□□□□ -2.32
CD47Q08722 RNU7-80P-201ENST00000459562 61 ntBASIC0.53□□□□□ -2.32
CD47Q08722 RNU6-1258P-201ENST00000516911 111 ntBASIC0.53□□□□□ -2.32
CD47Q08722 MIR6504-201ENST00000613520 61 ntBASIC0.53□□□□□ -2.32
CD47Q08722 AC078938.1-201ENST00000620993 318 ntBASIC0.53□□□□□ -2.32
CD47Q08722 MIR6841-201ENST00000637129 72 ntBASIC0.53□□□□□ -2.32
CD47Q08722 RNU6-379P-201ENST00000363813 104 ntBASIC0.52□□□□□ -2.33
CD47Q08722 MIR573-201ENST00000384964 99 ntBASIC0.52□□□□□ -2.33
CD47Q08722 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
CD47Q08722 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.52□□□□□ -2.33
CD47Q08722 RNU7-185P-201ENST00000459215 60 ntBASIC0.52□□□□□ -2.33
CD47Q08722 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
CD47Q08722 AC021613.1-201ENST00000623880 111 ntBASIC0.52□□□□□ -2.33
CD47Q08722 RNU6-1020P-201ENST00000363684 107 ntBASIC0.51□□□□□ -2.33
CD47Q08722 RNY1P11-201ENST00000363759 113 ntBASIC0.51□□□□□ -2.33
CD47Q08722 RNU1-133P-201ENST00000364867 167 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms