Protein–RNA interactions for Protein: Q03403

TFF2, Trefoil factor 2, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF2Q03403 RNU2-13P-201ENST00000515909 113 ntBASIC1.68□□□□□ -2.14
TFF2Q03403 SNORA31.11-201ENST00000516528 139 ntBASIC1.68□□□□□ -2.14
TFF2Q03403 RNU7-53P-201ENST00000516705 60 ntBASIC1.68□□□□□ -2.14
TFF2Q03403 MIR3152-201ENST00000579801 74 ntBASIC1.68□□□□□ -2.14
TFF2Q03403 AL049779.4-201ENST00000604500 156 ntBASIC1.68□□□□□ -2.14
TFF2Q03403 AC021613.1-201ENST00000623880 111 ntBASIC1.68□□□□□ -2.14
TFF2Q03403 MIR203B-201ENST00000636080 86 ntBASIC1.68□□□□□ -2.14
TFF2Q03403 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
TFF2Q03403 AL589743.1-201ENST00000551932 2712 ntBASIC1.68□□□□□ -2.14
TFF2Q03403 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.67□□□□□ -2.14
TFF2Q03403 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
TFF2Q03403 Y_RNA.30-201ENST00000362572 97 ntBASIC1.67□□□□□ -2.14
TFF2Q03403 RNU4-16P-201ENST00000364737 141 ntBASIC1.67□□□□□ -2.14
TFF2Q03403 Y_RNA.549-201ENST00000384657 102 ntBASIC1.67□□□□□ -2.14
TFF2Q03403 MIR520E-201ENST00000384867 87 ntBASIC1.67□□□□□ -2.14
TFF2Q03403 RNA5SP212-201ENST00000391223 107 ntBASIC1.67□□□□□ -2.14
TFF2Q03403 SNORD23.1-201ENST00000408212 104 ntBASIC1.67□□□□□ -2.14
TFF2Q03403 AL022718.1-201ENST00000412004 84 ntBASIC1.67□□□□□ -2.14
TFF2Q03403 AL031737.1-201ENST00000450125 223 ntBASIC1.67□□□□□ -2.14
TFF2Q03403 RPS29P29-201ENST00000456396 171 ntBASIC1.67□□□□□ -2.14
TFF2Q03403 RNA5SP57-201ENST00000459463 123 ntBASIC1.67□□□□□ -2.14
TFF2Q03403 SNORA31.4-201ENST00000516049 129 ntBASIC1.67□□□□□ -2.14
TFF2Q03403 RNU2-35P-201ENST00000516446 142 ntBASIC1.67□□□□□ -2.14
TFF2Q03403 SNORA31.15-201ENST00000516771 132 ntBASIC1.67□□□□□ -2.14
TFF2Q03403 RNU6-958P-201ENST00000516995 106 ntBASIC1.67□□□□□ -2.14
TFF2Q03403 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.67□□□□□ -2.14
TFF2Q03403 MIR3163-201ENST00000581592 73 ntBASIC1.67□□□□□ -2.14
TFF2Q03403 MIR548AR-201ENST00000582191 57 ntBASIC1.67□□□□□ -2.14
TFF2Q03403 FAM106DP-201ENST00000586416 501 ntBASIC1.67□□□□□ -2.14
TFF2Q03403 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.66□□□□□ -2.14
TFF2Q03403 Y_RNA.49-201ENST00000362714 112 ntBASIC1.66□□□□□ -2.14
TFF2Q03403 SNORA24-201ENST00000384096 131 ntBASIC1.66□□□□□ -2.14
TFF2Q03403 RNU6-106P-201ENST00000384405 107 ntBASIC1.66□□□□□ -2.14
TFF2Q03403 RNU6-1104P-201ENST00000384723 104 ntBASIC1.66□□□□□ -2.14
TFF2Q03403 RNU6-1319P-201ENST00000390855 104 ntBASIC1.66□□□□□ -2.14
TFF2Q03403 RNU6-747P-201ENST00000390928 104 ntBASIC1.66□□□□□ -2.14
TFF2Q03403 RNU6-241P-201ENST00000391148 104 ntBASIC1.66□□□□□ -2.14
TFF2Q03403 RNA5SP261-201ENST00000410536 106 ntBASIC1.66□□□□□ -2.14
TFF2Q03403 RNA5SP144-201ENST00000410846 116 ntBASIC1.66□□□□□ -2.14
TFF2Q03403 RNU6-177P-201ENST00000411257 104 ntBASIC1.66□□□□□ -2.14
TFF2Q03403 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
TFF2Q03403 SNORA63.5-201ENST00000363548 123 ntBASIC1.65□□□□□ -2.15
TFF2Q03403 Y_RNA.178-201ENST00000363832 102 ntBASIC1.65□□□□□ -2.15
TFF2Q03403 RNU1-93P-201ENST00000364704 169 ntBASIC1.65□□□□□ -2.15
TFF2Q03403 Y_RNA.362-201ENST00000365518 110 ntBASIC1.65□□□□□ -2.15
TFF2Q03403 Y_RNA.537-201ENST00000384626 109 ntBASIC1.65□□□□□ -2.15
TFF2Q03403 SNORA74.3-201ENST00000517108 154 ntBASIC1.65□□□□□ -2.15
TFF2Q03403 RNU6-1223P-201ENST00000517124 104 ntBASIC1.65□□□□□ -2.15
TFF2Q03403 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.65□□□□□ -2.15
TFF2Q03403 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.65□□□□□ -2.15
TFF2Q03403 AC243994.1-201ENST00000618627 109 ntBASIC1.65□□□□□ -2.15
TFF2Q03403 SNORD114-27-201ENST00000363766 70 ntBASIC1.64□□□□□ -2.15
TFF2Q03403 Y_RNA.531-201ENST00000384589 121 ntBASIC1.64□□□□□ -2.15
TFF2Q03403 MT-TI-201ENST00000387365 69 ntBASIC1.64□□□□□ -2.15
TFF2Q03403 SNORD28B-201ENST00000390993 75 ntBASIC1.64□□□□□ -2.15
TFF2Q03403 MIR1302-5-201ENST00000408164 150 ntBASIC1.64□□□□□ -2.15
TFF2Q03403 RPL39P34-201ENST00000477141 156 ntBASIC1.64□□□□□ -2.15
TFF2Q03403 AC022523.2-201ENST00000561045 150 ntBASIC1.64□□□□□ -2.15
TFF2Q03403 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.64□□□□□ -2.15
TFF2Q03403 MIR4791-201ENST00000607666 84 ntBASIC1.64□□□□□ -2.15
TFF2Q03403 RNU6-94P-201ENST00000607728 107 ntBASIC1.64□□□□□ -2.15
TFF2Q03403 uc_338.28-201ENST00000612082 187 ntBASIC1.64□□□□□ -2.15
TFF2Q03403 AL035470.1-201ENST00000622571 220 ntBASIC1.64□□□□□ -2.15
TFF2Q03403 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.64□□□□□ -2.15
TFF2Q03403 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
TFF2Q03403 Y_RNA.309-201ENST00000365046 111 ntBASIC1.63□□□□□ -2.15
TFF2Q03403 Y_RNA.323-201ENST00000365157 109 ntBASIC1.63□□□□□ -2.15
TFF2Q03403 RNA5SP37-201ENST00000365420 130 ntBASIC1.63□□□□□ -2.15
TFF2Q03403 RNU6-1014P-201ENST00000383940 103 ntBASIC1.63□□□□□ -2.15
TFF2Q03403 RNU6-32P-201ENST00000383948 107 ntBASIC1.63□□□□□ -2.15
TFF2Q03403 RNU6-203P-201ENST00000384038 104 ntBASIC1.63□□□□□ -2.15
TFF2Q03403 RNU6-13P-201ENST00000384248 107 ntBASIC1.63□□□□□ -2.15
TFF2Q03403 RNU6-12P-201ENST00000384604 107 ntBASIC1.63□□□□□ -2.15
TFF2Q03403 RNU6-41P-201ENST00000384741 107 ntBASIC1.63□□□□□ -2.15
TFF2Q03403 MIR194-1-201ENST00000384892 85 ntBASIC1.63□□□□□ -2.15
TFF2Q03403 MIR548D2-201ENST00000384955 97 ntBASIC1.63□□□□□ -2.15
TFF2Q03403 RNA5SP489-201ENST00000410986 109 ntBASIC1.63□□□□□ -2.15
TFF2Q03403 RPL23AP6-201ENST00000446637 472 ntBASIC1.63□□□□□ -2.15
TFF2Q03403 RNU7-73P-201ENST00000458743 63 ntBASIC1.63□□□□□ -2.15
TFF2Q03403 RNU6-168P-201ENST00000516189 101 ntBASIC1.63□□□□□ -2.15
TFF2Q03403 AC004812.1-201ENST00000540773 146 ntBASIC1.63□□□□□ -2.15
TFF2Q03403 MIR6078-201ENST00000611069 100 ntBASIC1.63□□□□□ -2.15
TFF2Q03403 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
TFF2Q03403 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
TFF2Q03403 MIR450A1-201ENST00000362262 91 ntBASIC1.62□□□□□ -2.15
TFF2Q03403 RNA5SP276-201ENST00000362580 94 ntBASIC1.62□□□□□ -2.15
TFF2Q03403 Y_RNA.163-201ENST00000363702 113 ntBASIC1.62□□□□□ -2.15
TFF2Q03403 SNORD48-201ENST00000364953 64 ntBASIC1.62□□□□□ -2.15
TFF2Q03403 Y_RNA.299-201ENST00000364973 94 ntBASIC1.62□□□□□ -2.15
TFF2Q03403 RNU6-554P-201ENST00000410466 106 ntBASIC1.62□□□□□ -2.15
TFF2Q03403 AL512326.2-201ENST00000426359 151 ntBASIC1.62□□□□□ -2.15
TFF2Q03403 RNU7-45P-201ENST00000459460 63 ntBASIC1.62□□□□□ -2.15
TFF2Q03403 RN7SL274P-201ENST00000492268 272 ntBASIC1.62□□□□□ -2.15
TFF2Q03403 RNA5SP436-201ENST00000516020 115 ntBASIC1.62□□□□□ -2.15
TFF2Q03403 RNU7-43P-201ENST00000516554 64 ntBASIC1.62□□□□□ -2.15
TFF2Q03403 RNA5SP82-201ENST00000516707 92 ntBASIC1.62□□□□□ -2.15
TFF2Q03403 RNU7-6P-201ENST00000516845 62 ntBASIC1.62□□□□□ -2.15
TFF2Q03403 SNORA31.24-201ENST00000517232 57 ntBASIC1.62□□□□□ -2.15
TFF2Q03403 Y_RNA.430-201ENST00000384081 110 ntBASIC1.61□□□□□ -2.15
TFF2Q03403 RNU6-1113P-201ENST00000384348 107 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 249.8 ms