Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 SNORD114-21-201ENST00000606412 72 ntBASIC0.84□□□□□ -2.27
CX3CL1P78423 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.84□□□□□ -2.27
CX3CL1P78423 uc_338.6-201ENST00000613544 171 ntBASIC0.84□□□□□ -2.27
CX3CL1P78423 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.84□□□□□ -2.27
CX3CL1P78423 MIR6740-201ENST00000618268 113 ntBASIC0.84□□□□□ -2.27
CX3CL1P78423 Y_RNA.52-201ENST00000362760 96 ntBASIC0.83□□□□□ -2.28
CX3CL1P78423 RNU4-84P-201ENST00000364200 139 ntBASIC0.83□□□□□ -2.28
CX3CL1P78423 RNU6-1082P-201ENST00000364574 107 ntBASIC0.83□□□□□ -2.28
CX3CL1P78423 RNU1-133P-201ENST00000364867 167 ntBASIC0.83□□□□□ -2.28
CX3CL1P78423 Y_RNA.357-201ENST00000365487 109 ntBASIC0.83□□□□□ -2.28
CX3CL1P78423 RNU6-239P-201ENST00000390990 99 ntBASIC0.83□□□□□ -2.28
CX3CL1P78423 RPS3AP1-201ENST00000413190 320 ntBASIC0.83□□□□□ -2.28
CX3CL1P78423 MTND5P15-201ENST00000434246 349 ntBASIC0.83□□□□□ -2.28
CX3CL1P78423 TRMT112P2-201ENST00000512910 132 ntBASIC0.83□□□□□ -2.28
CX3CL1P78423 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.83□□□□□ -2.28
CX3CL1P78423 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CX3CL1P78423 RNU6-1335P-201ENST00000365426 107 ntBASIC0.82□□□□□ -2.28
CX3CL1P78423 RNU6-1319P-201ENST00000390855 104 ntBASIC0.82□□□□□ -2.28
CX3CL1P78423 RNU6-747P-201ENST00000390928 104 ntBASIC0.82□□□□□ -2.28
CX3CL1P78423 SNORD89-201ENST00000390981 114 ntBASIC0.82□□□□□ -2.28
CX3CL1P78423 RNU6-241P-201ENST00000391148 104 ntBASIC0.82□□□□□ -2.28
CX3CL1P78423 MIR1827-201ENST00000408549 66 ntBASIC0.82□□□□□ -2.28
CX3CL1P78423 RNA5SP261-201ENST00000410536 106 ntBASIC0.82□□□□□ -2.28
CX3CL1P78423 RNU6-177P-201ENST00000411257 104 ntBASIC0.82□□□□□ -2.28
CX3CL1P78423 SNORD83.1-201ENST00000411362 77 ntBASIC0.82□□□□□ -2.28
CX3CL1P78423 RNU6-1053P-201ENST00000515930 101 ntBASIC0.82□□□□□ -2.28
CX3CL1P78423 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.82□□□□□ -2.28
CX3CL1P78423 AC004792.1-201ENST00000614523 137 ntBASIC0.82□□□□□ -2.28
CX3CL1P78423 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.82□□□□□ -2.28
CX3CL1P78423 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CX3CL1P78423 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CX3CL1P78423 MIR588-201ENST00000384900 83 ntBASIC0.81□□□□□ -2.28
CX3CL1P78423 SNORD12C-201ENST00000386307 89 ntBASIC0.81□□□□□ -2.28
CX3CL1P78423 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.81□□□□□ -2.28
CX3CL1P78423 SNORA75.5-201ENST00000391291 81 ntBASIC0.81□□□□□ -2.28
CX3CL1P78423 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.81□□□□□ -2.28
CX3CL1P78423 RNU6-321P-201ENST00000410912 106 ntBASIC0.81□□□□□ -2.28
CX3CL1P78423 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.81□□□□□ -2.28
CX3CL1P78423 U7.7-201ENST00000459276 60 ntBASIC0.81□□□□□ -2.28
CX3CL1P78423 Y_RNA.662-201ENST00000516028 97 ntBASIC0.81□□□□□ -2.28
CX3CL1P78423 RNU6-1110P-201ENST00000516462 101 ntBASIC0.81□□□□□ -2.28
CX3CL1P78423 MIR3658-201ENST00000636291 56 ntBASIC0.81□□□□□ -2.28
CX3CL1P78423 AC010332.2-201ENST00000613083 1904 ntBASIC0.8□□□□□ -2.28
CX3CL1P78423 RNU6-369P-201ENST00000362515 102 ntBASIC0.8□□□□□ -2.28
CX3CL1P78423 RNU4-16P-201ENST00000364737 141 ntBASIC0.8□□□□□ -2.28
CX3CL1P78423 RNU6-818P-201ENST00000364837 108 ntBASIC0.8□□□□□ -2.28
CX3CL1P78423 RNU6-1165P-201ENST00000410119 107 ntBASIC0.8□□□□□ -2.28
CX3CL1P78423 snoU13.2-201ENST00000459201 104 ntBASIC0.8□□□□□ -2.28
CX3CL1P78423 AC074198.2-201ENST00000508153 258 ntBASIC0.8□□□□□ -2.28
CX3CL1P78423 RNU7-121P-201ENST00000516604 62 ntBASIC0.8□□□□□ -2.28
CX3CL1P78423 AC090425.1-201ENST00000610007 140 ntBASIC0.8□□□□□ -2.28
CX3CL1P78423 AC021613.1-201ENST00000623880 111 ntBASIC0.8□□□□□ -2.28
CX3CL1P78423 MIR6844-201ENST00000637122 62 ntBASIC0.8□□□□□ -2.28
CX3CL1P78423 MIR6841-201ENST00000637129 72 ntBASIC0.8□□□□□ -2.28
CX3CL1P78423 RNU4-38P-201ENST00000364472 129 ntBASIC0.79□□□□□ -2.28
CX3CL1P78423 RNU6-1187P-201ENST00000364771 110 ntBASIC0.79□□□□□ -2.28
CX3CL1P78423 RNU1-36P-201ENST00000365130 165 ntBASIC0.79□□□□□ -2.28
CX3CL1P78423 RNU6-934P-201ENST00000365154 107 ntBASIC0.79□□□□□ -2.28
CX3CL1P78423 RNU6-1318P-201ENST00000365389 103 ntBASIC0.79□□□□□ -2.28
CX3CL1P78423 Y_RNA.354-201ENST00000365448 111 ntBASIC0.79□□□□□ -2.28
CX3CL1P78423 Y_RNA.430-201ENST00000384081 110 ntBASIC0.79□□□□□ -2.28
CX3CL1P78423 Y_RNA.441-201ENST00000384123 112 ntBASIC0.79□□□□□ -2.28
CX3CL1P78423 SNORA20-201ENST00000384662 132 ntBASIC0.79□□□□□ -2.28
CX3CL1P78423 MIR100-201ENST00000385259 80 ntBASIC0.79□□□□□ -2.28
CX3CL1P78423 AC015818.7-201ENST00000428754 109 ntBASIC0.79□□□□□ -2.28
CX3CL1P78423 AC087499.7-201ENST00000441958 109 ntBASIC0.79□□□□□ -2.28
CX3CL1P78423 RNA5SP236-201ENST00000516169 116 ntBASIC0.79□□□□□ -2.28
CX3CL1P78423 MIR4771-2-201ENST00000577758 74 ntBASIC0.79□□□□□ -2.28
CX3CL1P78423 MIR3646-201ENST00000578301 84 ntBASIC0.79□□□□□ -2.28
CX3CL1P78423 MIR3152-201ENST00000579801 74 ntBASIC0.79□□□□□ -2.28
CX3CL1P78423 MIR4771-1-201ENST00000582617 74 ntBASIC0.79□□□□□ -2.28
CX3CL1P78423 AL136317.1-201ENST00000612653 226 ntBASIC0.79□□□□□ -2.28
CX3CL1P78423 MIR1-1-201ENST00000362147 71 ntBASIC0.78□□□□□ -2.28
CX3CL1P78423 MIR563-201ENST00000385080 79 ntBASIC0.78□□□□□ -2.28
CX3CL1P78423 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.78□□□□□ -2.28
CX3CL1P78423 RPS26P5-201ENST00000418544 335 ntBASIC0.78□□□□□ -2.28
CX3CL1P78423 ACA64.5-201ENST00000516207 127 ntBASIC0.78□□□□□ -2.28
CX3CL1P78423 DNAJC19P2-201ENST00000593340 302 ntBASIC0.78□□□□□ -2.28
CX3CL1P78423 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
CX3CL1P78423 SNORA22.1-201ENST00000362701 134 ntBASIC0.77□□□□□ -2.29
CX3CL1P78423 RNY1P10-201ENST00000363268 113 ntBASIC0.77□□□□□ -2.29
CX3CL1P78423 Y_RNA.272-201ENST00000364696 102 ntBASIC0.77□□□□□ -2.29
CX3CL1P78423 RNY1P6-201ENST00000384193 109 ntBASIC0.77□□□□□ -2.29
CX3CL1P78423 Y_RNA.497-201ENST00000384447 98 ntBASIC0.77□□□□□ -2.29
CX3CL1P78423 RNU6-588P-201ENST00000410281 105 ntBASIC0.77□□□□□ -2.29
CX3CL1P78423 RNU6-1135P-201ENST00000411083 103 ntBASIC0.77□□□□□ -2.29
CX3CL1P78423 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.77□□□□□ -2.29
CX3CL1P78423 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
CX3CL1P78423 MIR608-201ENST00000384820 100 ntBASIC0.76□□□□□ -2.29
CX3CL1P78423 MIR605-201ENST00000385078 83 ntBASIC0.76□□□□□ -2.29
CX3CL1P78423 SNORD37.2-201ENST00000391075 66 ntBASIC0.76□□□□□ -2.29
CX3CL1P78423 RNU6-182P-201ENST00000516970 105 ntBASIC0.76□□□□□ -2.29
CX3CL1P78423 AC025627.3-201ENST00000582078 182 ntBASIC0.76□□□□□ -2.29
CX3CL1P78423 AL353765.1-201ENST00000605514 183 ntBASIC0.76□□□□□ -2.29
CX3CL1P78423 MIR30D-201ENST00000362283 70 ntBASIC0.75□□□□□ -2.29
CX3CL1P78423 RNY1P11-201ENST00000363759 113 ntBASIC0.75□□□□□ -2.29
CX3CL1P78423 SNORD105-201ENST00000386910 85 ntBASIC0.75□□□□□ -2.29
CX3CL1P78423 SNORD99-201ENST00000408612 74 ntBASIC0.75□□□□□ -2.29
CX3CL1P78423 MIR18B-201ENST00000454574 71 ntBASIC0.75□□□□□ -2.29
CX3CL1P78423 RPL39P28-201ENST00000465655 155 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 283.8 ms