Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 SNORA18-201ENST00000384416 132 ntBASIC-1.22□□□□□ -2.6
SKP1P63208 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.22□□□□□ -2.6
SKP1P63208 RNU7-188P-201ENST00000517063 64 ntBASIC-1.22□□□□□ -2.6
SKP1P63208 RNY3P11-201ENST00000364153 102 ntBASIC-1.23□□□□□ -2.61
SKP1P63208 SNORA20-201ENST00000384662 132 ntBASIC-1.23□□□□□ -2.61
SKP1P63208 RNY1P7-201ENST00000384743 110 ntBASIC-1.23□□□□□ -2.61
SKP1P63208 RNU6-510P-201ENST00000391239 108 ntBASIC-1.23□□□□□ -2.61
SKP1P63208 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.23□□□□□ -2.61
SKP1P63208 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.23□□□□□ -2.61
SKP1P63208 RNU6-120P-201ENST00000516077 103 ntBASIC-1.23□□□□□ -2.61
SKP1P63208 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.23□□□□□ -2.61
SKP1P63208 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.24□□□□□ -2.61
SKP1P63208 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.24□□□□□ -2.61
SKP1P63208 RNU6-47P-201ENST00000383866 107 ntBASIC-1.24□□□□□ -2.61
SKP1P63208 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.24□□□□□ -2.61
SKP1P63208 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.24□□□□□ -2.61
SKP1P63208 RNU7-80P-201ENST00000459562 61 ntBASIC-1.24□□□□□ -2.61
SKP1P63208 RNU6-138P-201ENST00000515952 107 ntBASIC-1.24□□□□□ -2.61
SKP1P63208 RNU4-80P-201ENST00000363200 141 ntBASIC-1.25□□□□□ -2.61
SKP1P63208 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.25□□□□□ -2.61
SKP1P63208 AP001328.1-201ENST00000528550 176 ntBASIC-1.25□□□□□ -2.61
SKP1P63208 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.25□□□□□ -2.61
SKP1P63208 AL669831.3-213ENST00000636676 183 ntBASIC-1.25□□□□□ -2.61
SKP1P63208 U6.109-201ENST00000636749 87 ntBASIC-1.25□□□□□ -2.61
SKP1P63208 AC093726.3-201ENST00000637588 150 ntBASIC-1.25□□□□□ -2.61
SKP1P63208 RNY4P14-201ENST00000363656 96 ntBASIC-1.26□□□□□ -2.61
SKP1P63208 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.26□□□□□ -2.61
SKP1P63208 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.26□□□□□ -2.61
SKP1P63208 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.26□□□□□ -2.61
SKP1P63208 RNA5SP476-201ENST00000516613 103 ntBASIC-1.26□□□□□ -2.61
SKP1P63208 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.26□□□□□ -2.61
SKP1P63208 IGKV1-22-201ENST00000524313 326 ntBASIC-1.26□□□□□ -2.61
SKP1P63208 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.26□□□□□ -2.61
SKP1P63208 MIR367-201ENST00000362299 68 ntBASIC-1.27□□□□□ -2.61
SKP1P63208 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.27□□□□□ -2.61
SKP1P63208 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.27□□□□□ -2.61
SKP1P63208 RNU6-455P-201ENST00000384681 107 ntBASIC-1.27□□□□□ -2.61
SKP1P63208 RNU6-21P-201ENST00000384710 107 ntBASIC-1.27□□□□□ -2.61
SKP1P63208 SNORD83B-201ENST00000386745 93 ntBASIC-1.27□□□□□ -2.61
SKP1P63208 MIR4473-201ENST00000583731 91 ntBASIC-1.27□□□□□ -2.61
SKP1P63208 AC078883.4-201ENST00000623218 367 ntBASIC-1.27□□□□□ -2.61
SKP1P63208 SNORA22.1-201ENST00000362701 134 ntBASIC-1.28□□□□□ -2.61
SKP1P63208 SNORD63-201ENST00000384262 68 ntBASIC-1.28□□□□□ -2.61
SKP1P63208 MIR181A1-201ENST00000385026 110 ntBASIC-1.28□□□□□ -2.61
SKP1P63208 RNU2-16P-201ENST00000410712 136 ntBASIC-1.28□□□□□ -2.61
SKP1P63208 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.28□□□□□ -2.61
SKP1P63208 RNU6-506P-201ENST00000516553 94 ntBASIC-1.28□□□□□ -2.61
SKP1P63208 RNU6-314P-201ENST00000516574 104 ntBASIC-1.28□□□□□ -2.61
SKP1P63208 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.28□□□□□ -2.61
SKP1P63208 MIR548AX-201ENST00000580117 73 ntBASIC-1.28□□□□□ -2.61
SKP1P63208 MIR548H5-201ENST00000580314 60 ntBASIC-1.28□□□□□ -2.61
SKP1P63208 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
SKP1P63208 MIR3974-201ENST00000637126 96 ntBASIC-1.28□□□□□ -2.61
SKP1P63208 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.29□□□□□ -2.62
SKP1P63208 MIR635-201ENST00000384830 98 ntBASIC-1.29□□□□□ -2.62
SKP1P63208 AL445193.1-201ENST00000441183 141 ntBASIC-1.29□□□□□ -2.62
SKP1P63208 MTCO2P24-201ENST00000515611 426 ntBASIC-1.29□□□□□ -2.62
SKP1P63208 MIR4724-201ENST00000579485 89 ntBASIC-1.29□□□□□ -2.62
SKP1P63208 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.29□□□□□ -2.62
SKP1P63208 AC091932.4-201ENST00000623386 200 ntBASIC-1.29□□□□□ -2.62
SKP1P63208 AC138305.3-201ENST00000624988 240 ntBASIC-1.29□□□□□ -2.62
SKP1P63208 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.3□□□□□ -2.62
SKP1P63208 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.3□□□□□ -2.62
SKP1P63208 SPINT5P-201ENST00000448174 155 ntBASIC-1.3□□□□□ -2.62
SKP1P63208 RNU6-397P-201ENST00000516226 104 ntBASIC-1.3□□□□□ -2.62
SKP1P63208 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.3□□□□□ -2.62
SKP1P63208 RNU7-10P-201ENST00000607194 63 ntBASIC-1.3□□□□□ -2.62
SKP1P63208 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.3□□□□□ -2.62
SKP1P63208 RNY3-201ENST00000365484 102 ntBASIC-1.31□□□□□ -2.62
SKP1P63208 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.31□□□□□ -2.62
SKP1P63208 MIR204-201ENST00000385200 110 ntBASIC-1.31□□□□□ -2.62
SKP1P63208 RNU6-763P-201ENST00000390865 106 ntBASIC-1.31□□□□□ -2.62
SKP1P63208 MTND3P8-201ENST00000412909 339 ntBASIC-1.31□□□□□ -2.62
SKP1P63208 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.31□□□□□ -2.62
SKP1P63208 AC013791.1-201ENST00000616619 62 ntBASIC-1.31□□□□□ -2.62
SKP1P63208 RNU6-30P-201ENST00000384561 107 ntBASIC-1.32□□□□□ -2.62
SKP1P63208 MIR181B2-201ENST00000385004 89 ntBASIC-1.32□□□□□ -2.62
SKP1P63208 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.32□□□□□ -2.62
SKP1P63208 RNU7-74P-201ENST00000459104 62 ntBASIC-1.32□□□□□ -2.62
SKP1P63208 snoU13.11-201ENST00000459219 104 ntBASIC-1.32□□□□□ -2.62
SKP1P63208 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.32□□□□□ -2.62
SKP1P63208 RNU7-79P-201ENST00000516082 62 ntBASIC-1.32□□□□□ -2.62
SKP1P63208 RNU6-191P-201ENST00000516295 94 ntBASIC-1.32□□□□□ -2.62
SKP1P63208 RNU6-881P-201ENST00000516813 102 ntBASIC-1.32□□□□□ -2.62
SKP1P63208 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.32□□□□□ -2.62
SKP1P63208 MIR4760-201ENST00000585040 80 ntBASIC-1.32□□□□□ -2.62
SKP1P63208 VN1R91P-201ENST00000594377 169 ntBASIC-1.32□□□□□ -2.62
SKP1P63208 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.32□□□□□ -2.62
SKP1P63208 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.33□□□□□ -2.62
SKP1P63208 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.33□□□□□ -2.62
SKP1P63208 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.33□□□□□ -2.62
SKP1P63208 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.33□□□□□ -2.62
SKP1P63208 RNU6-893P-201ENST00000458841 100 ntBASIC-1.33□□□□□ -2.62
SKP1P63208 AC021613.1-201ENST00000623880 111 ntBASIC-1.33□□□□□ -2.62
SKP1P63208 MIR376A2-201ENST00000636782 80 ntBASIC-1.33□□□□□ -2.62
SKP1P63208 RNY1P2-201ENST00000364820 117 ntBASIC-1.34□□□□□ -2.62
SKP1P63208 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.34□□□□□ -2.62
SKP1P63208 RNU4-70P-201ENST00000384579 139 ntBASIC-1.34□□□□□ -2.62
SKP1P63208 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.34□□□□□ -2.62
SKP1P63208 MTATP6P23-201ENST00000440153 476 ntBASIC-1.34□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms