Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 RNU6-1149P-201ENST00000516810 97 ntBASIC1.09□□□□□ -2.23
CLDN2P57739 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.09□□□□□ -2.23
CLDN2P57739 MIR4264-201ENST00000583520 66 ntBASIC1.09□□□□□ -2.23
CLDN2P57739 SNORA4-201ENST00000584302 138 ntBASIC1.09□□□□□ -2.23
CLDN2P57739 AP000753.3-201ENST00000604083 169 ntBASIC1.09□□□□□ -2.23
CLDN2P57739 MIR6767-201ENST00000637302 66 ntBASIC1.09□□□□□ -2.23
CLDN2P57739 RNU6-939P-201ENST00000384634 107 ntBASIC1.08□□□□□ -2.24
CLDN2P57739 SNORD38B-201ENST00000384690 67 ntBASIC1.08□□□□□ -2.24
CLDN2P57739 MIR200A-201ENST00000384875 90 ntBASIC1.08□□□□□ -2.24
CLDN2P57739 MIR150-201ENST00000385048 84 ntBASIC1.08□□□□□ -2.24
CLDN2P57739 Y_RNA.580-201ENST00000391004 95 ntBASIC1.08□□□□□ -2.24
CLDN2P57739 SNORD37.2-201ENST00000391075 66 ntBASIC1.08□□□□□ -2.24
CLDN2P57739 SNORD38B-202ENST00000625943 69 ntBASIC1.08□□□□□ -2.24
CLDN2P57739 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CLDN2P57739 AL596211.1-201ENST00000569873 2277 ntBASIC1.08□□□□□ -2.24
CLDN2P57739 Y_RNA.52-201ENST00000362760 96 ntBASIC1.07□□□□□ -2.24
CLDN2P57739 RNU6-1336P-201ENST00000383886 109 ntBASIC1.07□□□□□ -2.24
CLDN2P57739 SNORD111-201ENST00000408139 94 ntBASIC1.07□□□□□ -2.24
CLDN2P57739 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.07□□□□□ -2.24
CLDN2P57739 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.07□□□□□ -2.24
CLDN2P57739 MTND5P32-201ENST00000560711 1802 ntBASIC1.07□□□□□ -2.24
CLDN2P57739 Y_RNA.168-201ENST00000363740 102 ntBASIC1.06□□□□□ -2.24
CLDN2P57739 RNU6-654P-201ENST00000364373 107 ntBASIC1.06□□□□□ -2.24
CLDN2P57739 SNORD113.3-201ENST00000364630 78 ntBASIC1.06□□□□□ -2.24
CLDN2P57739 Y_RNA.354-201ENST00000365448 111 ntBASIC1.06□□□□□ -2.24
CLDN2P57739 RNU6-125P-201ENST00000384505 107 ntBASIC1.06□□□□□ -2.24
CLDN2P57739 PCNPP3-201ENST00000393579 471 ntBASIC1.06□□□□□ -2.24
CLDN2P57739 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
CLDN2P57739 RNU6-394P-201ENST00000410735 107 ntBASIC1.06□□□□□ -2.24
CLDN2P57739 RPS29P1-201ENST00000465274 159 ntBASIC1.06□□□□□ -2.24
CLDN2P57739 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.06□□□□□ -2.24
CLDN2P57739 MIR3152-201ENST00000579801 74 ntBASIC1.06□□□□□ -2.24
CLDN2P57739 AL078603.1-201ENST00000603824 313 ntBASIC1.06□□□□□ -2.24
CLDN2P57739 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
CLDN2P57739 AC106800.4-201ENST00000614905 153 ntBASIC1.06□□□□□ -2.24
CLDN2P57739 MIR6717-201ENST00000622747 73 ntBASIC1.06□□□□□ -2.24
CLDN2P57739 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.06□□□□□ -2.24
CLDN2P57739 Y_RNA.150-201ENST00000363562 102 ntBASIC1.05□□□□□ -2.24
CLDN2P57739 RNU6-449P-201ENST00000383914 107 ntBASIC1.05□□□□□ -2.24
CLDN2P57739 SNORA20-201ENST00000384662 132 ntBASIC1.05□□□□□ -2.24
CLDN2P57739 RNU6-1319P-201ENST00000390855 104 ntBASIC1.05□□□□□ -2.24
CLDN2P57739 RNU6-747P-201ENST00000390928 104 ntBASIC1.05□□□□□ -2.24
CLDN2P57739 RNU6-241P-201ENST00000391148 104 ntBASIC1.05□□□□□ -2.24
CLDN2P57739 RNU6-588P-201ENST00000410281 105 ntBASIC1.05□□□□□ -2.24
CLDN2P57739 RNU6-177P-201ENST00000411257 104 ntBASIC1.05□□□□□ -2.24
CLDN2P57739 RPS3AP1-201ENST00000413190 320 ntBASIC1.05□□□□□ -2.24
CLDN2P57739 MTATP6P21-201ENST00000440681 189 ntBASIC1.05□□□□□ -2.24
CLDN2P57739 AC036111.3-201ENST00000526389 112 ntBASIC1.05□□□□□ -2.24
CLDN2P57739 MIR3658-201ENST00000636291 56 ntBASIC1.05□□□□□ -2.24
CLDN2P57739 RNU6-580P-201ENST00000365159 107 ntBASIC1.04□□□□□ -2.24
CLDN2P57739 Y_RNA.430-201ENST00000384081 110 ntBASIC1.04□□□□□ -2.24
CLDN2P57739 Y_RNA.497-201ENST00000384447 98 ntBASIC1.04□□□□□ -2.24
CLDN2P57739 SNORA26.6-201ENST00000391256 115 ntBASIC1.04□□□□□ -2.24
CLDN2P57739 AC090844.1-201ENST00000422019 156 ntBASIC1.04□□□□□ -2.24
CLDN2P57739 HMGN1P33-201ENST00000432945 451 ntBASIC1.04□□□□□ -2.24
CLDN2P57739 Y_RNA.778-201ENST00000620203 90 ntBASIC1.04□□□□□ -2.24
CLDN2P57739 Y_RNA.180-201ENST00000363867 113 ntBASIC1.03□□□□□ -2.24
CLDN2P57739 SNORD114-24-201ENST00000365029 72 ntBASIC1.03□□□□□ -2.24
CLDN2P57739 SNORA2B-201ENST00000384583 137 ntBASIC1.03□□□□□ -2.24
CLDN2P57739 MIR489-201ENST00000384923 84 ntBASIC1.03□□□□□ -2.24
CLDN2P57739 Y_RNA.584-201ENST00000391090 114 ntBASIC1.03□□□□□ -2.24
CLDN2P57739 RNU6-602P-201ENST00000411155 105 ntBASIC1.03□□□□□ -2.24
CLDN2P57739 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.03□□□□□ -2.24
CLDN2P57739 RNU6-893P-201ENST00000458841 100 ntBASIC1.03□□□□□ -2.24
CLDN2P57739 RN7SKP179-201ENST00000516126 217 ntBASIC1.03□□□□□ -2.24
CLDN2P57739 RNA5SP236-201ENST00000516169 116 ntBASIC1.03□□□□□ -2.24
CLDN2P57739 AC112693.2-201ENST00000556538 232 ntBASIC1.03□□□□□ -2.24
CLDN2P57739 AC023827.1-201ENST00000569247 97 ntBASIC1.03□□□□□ -2.24
CLDN2P57739 AC021613.1-201ENST00000623880 111 ntBASIC1.03□□□□□ -2.24
CLDN2P57739 RNY1P6-201ENST00000384193 109 ntBASIC1.02□□□□□ -2.25
CLDN2P57739 RNU6-1190P-201ENST00000410811 104 ntBASIC1.02□□□□□ -2.25
CLDN2P57739 AC244023.1-201ENST00000426884 112 ntBASIC1.02□□□□□ -2.25
CLDN2P57739 FABP5P4-201ENST00000437203 171 ntBASIC1.02□□□□□ -2.25
CLDN2P57739 RNU6-113P-201ENST00000516653 101 ntBASIC1.02□□□□□ -2.25
CLDN2P57739 MIR3144-201ENST00000579460 79 ntBASIC1.02□□□□□ -2.25
CLDN2P57739 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.02□□□□□ -2.25
CLDN2P57739 AC242498.1-201ENST00000604134 111 ntBASIC1.02□□□□□ -2.25
CLDN2P57739 AC011603.4-201ENST00000611325 277 ntBASIC1.02□□□□□ -2.25
CLDN2P57739 AC104465.1-201ENST00000611365 139 ntBASIC1.02□□□□□ -2.25
CLDN2P57739 MIR6734-201ENST00000621166 68 ntBASIC1.02□□□□□ -2.25
CLDN2P57739 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CLDN2P57739 RNU4-11P-201ENST00000365287 132 ntBASIC1.01□□□□□ -2.25
CLDN2P57739 SNORD18B-201ENST00000365659 72 ntBASIC1.01□□□□□ -2.25
CLDN2P57739 SNORD116-18-201ENST00000383961 92 ntBASIC1.01□□□□□ -2.25
CLDN2P57739 Y_RNA.464-201ENST00000384282 110 ntBASIC1.01□□□□□ -2.25
CLDN2P57739 RNU6-907P-201ENST00000390924 102 ntBASIC1.01□□□□□ -2.25
CLDN2P57739 RNA5SP95-201ENST00000410319 137 ntBASIC1.01□□□□□ -2.25
CLDN2P57739 RNU7-45P-201ENST00000459460 63 ntBASIC1.01□□□□□ -2.25
CLDN2P57739 snoU13.18-201ENST00000459483 104 ntBASIC1.01□□□□□ -2.25
CLDN2P57739 RMST_2.1-201ENST00000617263 136 ntBASIC1.01□□□□□ -2.25
CLDN2P57739 AC012676.2-201ENST00000619258 186 ntBASIC1.01□□□□□ -2.25
CLDN2P57739 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.01□□□□□ -2.25
CLDN2P57739 AL391516.1-201ENST00000554380 2449 ntBASIC1.01□□□□□ -2.25
CLDN2P57739 Y_RNA.120-201ENST00000363304 110 ntBASIC1□□□□□ -2.25
CLDN2P57739 RNU6-151P-201ENST00000364158 107 ntBASIC1□□□□□ -2.25
CLDN2P57739 RNU6-42P-201ENST00000384165 107 ntBASIC1□□□□□ -2.25
CLDN2P57739 RNU6-205P-201ENST00000390858 107 ntBASIC1□□□□□ -2.25
CLDN2P57739 AC067940.1-201ENST00000458411 300 ntBASIC1□□□□□ -2.25
CLDN2P57739 SNORD124-201ENST00000459577 104 ntBASIC1□□□□□ -2.25
CLDN2P57739 RNA5SP220-201ENST00000516298 104 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 248.2 ms