Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SNORD113.3-201ENST00000364630 78 ntBASIC0.99□□□□□ -2.25
CLDN20P56880 Y_RNA.497-201ENST00000384447 98 ntBASIC0.99□□□□□ -2.25
CLDN20P56880 RNU6-1319P-201ENST00000390855 104 ntBASIC0.99□□□□□ -2.25
CLDN20P56880 RNU6-747P-201ENST00000390928 104 ntBASIC0.99□□□□□ -2.25
CLDN20P56880 RNU6-241P-201ENST00000391148 104 ntBASIC0.99□□□□□ -2.25
CLDN20P56880 SNORA26.6-201ENST00000391256 115 ntBASIC0.99□□□□□ -2.25
CLDN20P56880 SNORD111-201ENST00000408139 94 ntBASIC0.99□□□□□ -2.25
CLDN20P56880 RNU6-1190P-201ENST00000410811 104 ntBASIC0.99□□□□□ -2.25
CLDN20P56880 RNU6-177P-201ENST00000411257 104 ntBASIC0.99□□□□□ -2.25
CLDN20P56880 HMGN1P33-201ENST00000432945 451 ntBASIC0.99□□□□□ -2.25
CLDN20P56880 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.99□□□□□ -2.25
CLDN20P56880 MIR3152-201ENST00000579801 74 ntBASIC0.99□□□□□ -2.25
CLDN20P56880 MIR4295-201ENST00000585286 85 ntBASIC0.99□□□□□ -2.25
CLDN20P56880 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.99□□□□□ -2.25
CLDN20P56880 AC104465.1-201ENST00000611365 139 ntBASIC0.99□□□□□ -2.25
CLDN20P56880 MIR6717-201ENST00000622747 73 ntBASIC0.99□□□□□ -2.25
CLDN20P56880 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CLDN20P56880 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.98□□□□□ -2.25
CLDN20P56880 SNORA22-201ENST00000383907 134 ntBASIC0.98□□□□□ -2.25
CLDN20P56880 RNU6-449P-201ENST00000383914 107 ntBASIC0.98□□□□□ -2.25
CLDN20P56880 SNORA22C-201ENST00000384614 134 ntBASIC0.98□□□□□ -2.25
CLDN20P56880 MIR200A-201ENST00000384875 90 ntBASIC0.98□□□□□ -2.25
CLDN20P56880 RNU6-602P-201ENST00000411155 105 ntBASIC0.98□□□□□ -2.25
CLDN20P56880 RPS3AP1-201ENST00000413190 320 ntBASIC0.98□□□□□ -2.25
CLDN20P56880 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
CLDN20P56880 AC087343.1-201ENST00000477341 475 ntBASIC0.98□□□□□ -2.25
CLDN20P56880 RNA5SP236-201ENST00000516169 116 ntBASIC0.98□□□□□ -2.25
CLDN20P56880 AC023827.1-201ENST00000569247 97 ntBASIC0.98□□□□□ -2.25
CLDN20P56880 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.98□□□□□ -2.25
CLDN20P56880 MIR8070-201ENST00000616510 88 ntBASIC0.98□□□□□ -2.25
CLDN20P56880 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CLDN20P56880 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.97□□□□□ -2.25
CLDN20P56880 Y_RNA.180-201ENST00000363867 113 ntBASIC0.97□□□□□ -2.25
CLDN20P56880 RNU6-580P-201ENST00000365159 107 ntBASIC0.97□□□□□ -2.25
CLDN20P56880 Y_RNA.354-201ENST00000365448 111 ntBASIC0.97□□□□□ -2.25
CLDN20P56880 SNORD116-18-201ENST00000383961 92 ntBASIC0.97□□□□□ -2.25
CLDN20P56880 Y_RNA.430-201ENST00000384081 110 ntBASIC0.97□□□□□ -2.25
CLDN20P56880 SNORA2B-201ENST00000384583 137 ntBASIC0.97□□□□□ -2.25
CLDN20P56880 SNORA20-201ENST00000384662 132 ntBASIC0.97□□□□□ -2.25
CLDN20P56880 RNU6-907P-201ENST00000390924 102 ntBASIC0.97□□□□□ -2.25
CLDN20P56880 RNA5SP95-201ENST00000410319 137 ntBASIC0.97□□□□□ -2.25
CLDN20P56880 AC244023.1-201ENST00000426884 112 ntBASIC0.97□□□□□ -2.25
CLDN20P56880 MTATP6P21-201ENST00000440681 189 ntBASIC0.97□□□□□ -2.25
CLDN20P56880 RNU7-45P-201ENST00000459460 63 ntBASIC0.97□□□□□ -2.25
CLDN20P56880 Y_RNA.676-201ENST00000516393 96 ntBASIC0.97□□□□□ -2.25
CLDN20P56880 AC112693.2-201ENST00000556538 232 ntBASIC0.97□□□□□ -2.25
CLDN20P56880 MIR3144-201ENST00000579460 79 ntBASIC0.97□□□□□ -2.25
CLDN20P56880 AC242498.1-201ENST00000604134 111 ntBASIC0.97□□□□□ -2.25
CLDN20P56880 Y_RNA.778-201ENST00000620203 90 ntBASIC0.97□□□□□ -2.25
CLDN20P56880 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.96□□□□□ -2.25
CLDN20P56880 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CLDN20P56880 SNORD114-27-201ENST00000363766 70 ntBASIC0.96□□□□□ -2.26
CLDN20P56880 RNU6-151P-201ENST00000364158 107 ntBASIC0.96□□□□□ -2.26
CLDN20P56880 RNU4-11P-201ENST00000365287 132 ntBASIC0.96□□□□□ -2.26
CLDN20P56880 RNY1P6-201ENST00000384193 109 ntBASIC0.96□□□□□ -2.26
CLDN20P56880 RNU6-804P-201ENST00000384286 107 ntBASIC0.96□□□□□ -2.26
CLDN20P56880 RNU6-205P-201ENST00000390858 107 ntBASIC0.96□□□□□ -2.26
CLDN20P56880 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.96□□□□□ -2.26
CLDN20P56880 RNA5SP102-201ENST00000516865 106 ntBASIC0.96□□□□□ -2.26
CLDN20P56880 AC021613.1-201ENST00000623880 111 ntBASIC0.96□□□□□ -2.26
CLDN20P56880 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
CLDN20P56880 SNORD114-24-201ENST00000365029 72 ntBASIC0.95□□□□□ -2.26
CLDN20P56880 RNU6-1130P-201ENST00000365434 107 ntBASIC0.95□□□□□ -2.26
CLDN20P56880 Y_RNA.464-201ENST00000384282 110 ntBASIC0.95□□□□□ -2.26
CLDN20P56880 Y_RNA.584-201ENST00000391090 114 ntBASIC0.95□□□□□ -2.26
CLDN20P56880 FABP5P4-201ENST00000437203 171 ntBASIC0.95□□□□□ -2.26
CLDN20P56880 SNORD124-201ENST00000459577 104 ntBASIC0.95□□□□□ -2.26
CLDN20P56880 SNORD114-21-201ENST00000606412 72 ntBASIC0.95□□□□□ -2.26
CLDN20P56880 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.95□□□□□ -2.26
CLDN20P56880 Y_RNA.251-201ENST00000364551 99 ntBASIC0.94□□□□□ -2.26
CLDN20P56880 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.94□□□□□ -2.26
CLDN20P56880 RNU7-62P-201ENST00000458856 62 ntBASIC0.94□□□□□ -2.26
CLDN20P56880 HSPE1P19-201ENST00000603327 295 ntBASIC0.94□□□□□ -2.26
CLDN20P56880 AC011603.4-201ENST00000611325 277 ntBASIC0.94□□□□□ -2.26
CLDN20P56880 AC012676.2-201ENST00000619258 186 ntBASIC0.94□□□□□ -2.26
CLDN20P56880 MIR6841-201ENST00000637129 72 ntBASIC0.94□□□□□ -2.26
CLDN20P56880 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.93□□□□□ -2.26
CLDN20P56880 MIR96-201ENST00000362288 78 ntBASIC0.93□□□□□ -2.26
CLDN20P56880 Y_RNA.8-201ENST00000362353 102 ntBASIC0.93□□□□□ -2.26
CLDN20P56880 RNU6-349P-201ENST00000362402 107 ntBASIC0.93□□□□□ -2.26
CLDN20P56880 SNORD18B-201ENST00000365659 72 ntBASIC0.93□□□□□ -2.26
CLDN20P56880 Y_RNA.398-201ENST00000383952 99 ntBASIC0.93□□□□□ -2.26
CLDN20P56880 MIR942-201ENST00000401111 86 ntBASIC0.93□□□□□ -2.26
CLDN20P56880 MIR1276-201ENST00000408707 83 ntBASIC0.93□□□□□ -2.26
CLDN20P56880 RNU6-994P-201ENST00000410507 111 ntBASIC0.93□□□□□ -2.26
CLDN20P56880 RNU6-893P-201ENST00000458841 100 ntBASIC0.93□□□□□ -2.26
CLDN20P56880 RNU2-60P-201ENST00000517290 128 ntBASIC0.93□□□□□ -2.26
CLDN20P56880 RNU6-94P-201ENST00000607728 107 ntBASIC0.93□□□□□ -2.26
CLDN20P56880 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
CLDN20P56880 SNORA22.1-201ENST00000362701 134 ntBASIC0.92□□□□□ -2.26
CLDN20P56880 Y_RNA.120-201ENST00000363304 110 ntBASIC0.92□□□□□ -2.26
CLDN20P56880 RNY1P11-201ENST00000363759 113 ntBASIC0.92□□□□□ -2.26
CLDN20P56880 RNU4-16P-201ENST00000364737 141 ntBASIC0.92□□□□□ -2.26
CLDN20P56880 MIR513C-201ENST00000401352 84 ntBASIC0.92□□□□□ -2.26
CLDN20P56880 AC067940.1-201ENST00000458411 300 ntBASIC0.92□□□□□ -2.26
CLDN20P56880 RNU7-197P-201ENST00000458836 62 ntBASIC0.92□□□□□ -2.26
CLDN20P56880 snoU13.2-201ENST00000459201 104 ntBASIC0.92□□□□□ -2.26
CLDN20P56880 RNU6-1212P-201ENST00000517023 104 ntBASIC0.92□□□□□ -2.26
CLDN20P56880 MIR6740-201ENST00000618268 113 ntBASIC0.92□□□□□ -2.26
CLDN20P56880 AL391516.1-201ENST00000554380 2449 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms