Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RNU6-764P-201ENST00000516396 105 ntBASIC-0.36□□□□□ -2.47
CLDN6P56747 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.36□□□□□ -2.47
CLDN6P56747 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.36□□□□□ -2.47
CLDN6P56747 AC013791.1-201ENST00000616619 62 ntBASIC-0.36□□□□□ -2.47
CLDN6P56747 FTX_2.1-201ENST00000618816 94 ntBASIC-0.36□□□□□ -2.47
CLDN6P56747 AC244669.1-204ENST00000621564 178 ntBASIC-0.36□□□□□ -2.47
CLDN6P56747 AL391099.1-201ENST00000624635 187 ntBASIC-0.36□□□□□ -2.47
CLDN6P56747 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.37□□□□□ -2.47
CLDN6P56747 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.37□□□□□ -2.47
CLDN6P56747 RNU6-653P-201ENST00000363074 106 ntBASIC-0.37□□□□□ -2.47
CLDN6P56747 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.37□□□□□ -2.47
CLDN6P56747 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.37□□□□□ -2.47
CLDN6P56747 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.37□□□□□ -2.47
CLDN6P56747 RNA5SP300-201ENST00000391197 107 ntBASIC-0.37□□□□□ -2.47
CLDN6P56747 SNORA26.6-201ENST00000391256 115 ntBASIC-0.37□□□□□ -2.47
CLDN6P56747 RNA5SP261-201ENST00000410536 106 ntBASIC-0.37□□□□□ -2.47
CLDN6P56747 MTND1P34-201ENST00000438556 671 ntBASIC-0.37□□□□□ -2.47
CLDN6P56747 RNU7-45P-201ENST00000459460 63 ntBASIC-0.37□□□□□ -2.47
CLDN6P56747 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.37□□□□□ -2.47
CLDN6P56747 AC114755.3-201ENST00000481111 251 ntBASIC-0.37□□□□□ -2.47
CLDN6P56747 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.37□□□□□ -2.47
CLDN6P56747 RNU6-126P-201ENST00000516685 103 ntBASIC-0.37□□□□□ -2.47
CLDN6P56747 MIR4491-201ENST00000581087 68 ntBASIC-0.37□□□□□ -2.47
CLDN6P56747 AL133255.1-201ENST00000606374 441 ntBASIC-0.37□□□□□ -2.47
CLDN6P56747 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.38□□□□□ -2.47
CLDN6P56747 SNORD14C-201ENST00000365382 88 ntBASIC-0.38□□□□□ -2.47
CLDN6P56747 RNU6-597P-201ENST00000365620 102 ntBASIC-0.38□□□□□ -2.47
CLDN6P56747 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.38□□□□□ -2.47
CLDN6P56747 MIR548L-201ENST00000408303 86 ntBASIC-0.38□□□□□ -2.47
CLDN6P56747 AF228730.3-201ENST00000436691 102 ntBASIC-0.38□□□□□ -2.47
CLDN6P56747 RNU7-165P-201ENST00000458864 60 ntBASIC-0.38□□□□□ -2.47
CLDN6P56747 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.38□□□□□ -2.47
CLDN6P56747 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.39□□□□□ -2.47
CLDN6P56747 RNU6-652P-201ENST00000365488 107 ntBASIC-0.39□□□□□ -2.47
CLDN6P56747 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.39□□□□□ -2.47
CLDN6P56747 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.39□□□□□ -2.47
CLDN6P56747 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.39□□□□□ -2.47
CLDN6P56747 MRPS35P2-201ENST00000508242 191 ntBASIC-0.39□□□□□ -2.47
CLDN6P56747 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.39□□□□□ -2.47
CLDN6P56747 AC138869.1-201ENST00000568623 124 ntBASIC-0.39□□□□□ -2.47
CLDN6P56747 MTND5P34-201ENST00000568888 325 ntBASIC-0.39□□□□□ -2.47
CLDN6P56747 AC096720.1-201ENST00000604441 183 ntBASIC-0.39□□□□□ -2.47
CLDN6P56747 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.39□□□□□ -2.47
CLDN6P56747 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.4□□□□□ -2.47
CLDN6P56747 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.4□□□□□ -2.47
CLDN6P56747 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.4□□□□□ -2.47
CLDN6P56747 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.4□□□□□ -2.47
CLDN6P56747 SNORD116-4-201ENST00000384733 96 ntBASIC-0.4□□□□□ -2.47
CLDN6P56747 MIR635-201ENST00000384830 98 ntBASIC-0.4□□□□□ -2.47
CLDN6P56747 RNU6-269P-201ENST00000391077 97 ntBASIC-0.4□□□□□ -2.47
CLDN6P56747 RNY4P36-201ENST00000391116 96 ntBASIC-0.4□□□□□ -2.47
CLDN6P56747 MTATP6P26-201ENST00000445926 662 ntBASIC-0.4□□□□□ -2.47
CLDN6P56747 snoU13.11-201ENST00000459219 104 ntBASIC-0.4□□□□□ -2.47
CLDN6P56747 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.4□□□□□ -2.47
CLDN6P56747 SNORA40.14-201ENST00000516543 86 ntBASIC-0.4□□□□□ -2.47
CLDN6P56747 AC141846.1-201ENST00000568348 142 ntBASIC-0.4□□□□□ -2.47
CLDN6P56747 MIR5692C2-201ENST00000577959 77 ntBASIC-0.4□□□□□ -2.47
CLDN6P56747 MIR3152-201ENST00000579801 74 ntBASIC-0.4□□□□□ -2.47
CLDN6P56747 MIR548AX-201ENST00000580117 73 ntBASIC-0.4□□□□□ -2.47
CLDN6P56747 C8orf59P2-201ENST00000603441 271 ntBASIC-0.4□□□□□ -2.47
CLDN6P56747 RNU4-84P-201ENST00000364200 139 ntBASIC-0.41□□□□□ -2.48
CLDN6P56747 RNU6-876P-201ENST00000391295 104 ntBASIC-0.41□□□□□ -2.48
CLDN6P56747 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.41□□□□□ -2.48
CLDN6P56747 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.41□□□□□ -2.48
CLDN6P56747 MTCO2P24-201ENST00000515611 426 ntBASIC-0.41□□□□□ -2.48
CLDN6P56747 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.41□□□□□ -2.48
CLDN6P56747 RNU6-397P-201ENST00000516226 104 ntBASIC-0.41□□□□□ -2.48
CLDN6P56747 AP003733.2-201ENST00000529409 171 ntBASIC-0.41□□□□□ -2.48
CLDN6P56747 AL606534.2-204ENST00000635008 178 ntBASIC-0.41□□□□□ -2.48
CLDN6P56747 MIR4788-201ENST00000639104 80 ntBASIC-0.41□□□□□ -2.48
CLDN6P56747 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.42□□□□□ -2.48
CLDN6P56747 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.42□□□□□ -2.48
CLDN6P56747 SNORD116-29-201ENST00000384516 83 ntBASIC-0.42□□□□□ -2.48
CLDN6P56747 MIR196A1-201ENST00000388006 70 ntBASIC-0.42□□□□□ -2.48
CLDN6P56747 RNA5SP163-201ENST00000410304 99 ntBASIC-0.42□□□□□ -2.48
CLDN6P56747 SNORD57-201ENST00000448188 72 ntBASIC-0.42□□□□□ -2.48
CLDN6P56747 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.42□□□□□ -2.48
CLDN6P56747 RNU6-138P-201ENST00000515952 107 ntBASIC-0.42□□□□□ -2.48
CLDN6P56747 RNA5SP67-201ENST00000516422 131 ntBASIC-0.42□□□□□ -2.48
CLDN6P56747 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.42□□□□□ -2.48
CLDN6P56747 RNU1-29P-201ENST00000606574 126 ntBASIC-0.42□□□□□ -2.48
CLDN6P56747 AC104985.2-201ENST00000620598 500 ntBASIC-0.42□□□□□ -2.48
CLDN6P56747 SNORD113-8-201ENST00000363497 74 ntBASIC-0.43□□□□□ -2.48
CLDN6P56747 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.43□□□□□ -2.48
CLDN6P56747 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.43□□□□□ -2.48
CLDN6P56747 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.43□□□□□ -2.48
CLDN6P56747 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.43□□□□□ -2.48
CLDN6P56747 AC096949.1-201ENST00000412047 152 ntBASIC-0.43□□□□□ -2.48
CLDN6P56747 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.43□□□□□ -2.48
CLDN6P56747 MTND4P19-201ENST00000446659 478 ntBASIC-0.43□□□□□ -2.48
CLDN6P56747 AC109327.2-201ENST00000448339 378 ntBASIC-0.43□□□□□ -2.48
CLDN6P56747 SNORA20.3-201ENST00000516880 132 ntBASIC-0.43□□□□□ -2.48
CLDN6P56747 RNU6-897P-201ENST00000517135 105 ntBASIC-0.43□□□□□ -2.48
CLDN6P56747 RNU6-161P-201ENST00000363051 106 ntBASIC-0.44□□□□□ -2.48
CLDN6P56747 MT-TL1-201ENST00000386347 75 ntBASIC-0.44□□□□□ -2.48
CLDN6P56747 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.44□□□□□ -2.48
CLDN6P56747 RNU6-130P-201ENST00000411112 103 ntBASIC-0.44□□□□□ -2.48
CLDN6P56747 SNORA25.16-201ENST00000516741 121 ntBASIC-0.44□□□□□ -2.48
CLDN6P56747 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.44□□□□□ -2.48
CLDN6P56747 RNA5SP169-201ENST00000517268 117 ntBASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 198.2 ms