Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RNU6-653P-201ENST00000363074 106 ntBASIC0.13□□□□□ -2.39
PKNOX1P55347 RNU5E-4P-201ENST00000364931 120 ntBASIC0.13□□□□□ -2.39
PKNOX1P55347 Y_RNA.354-201ENST00000365448 111 ntBASIC0.13□□□□□ -2.39
PKNOX1P55347 Y_RNA.460-201ENST00000384255 102 ntBASIC0.13□□□□□ -2.39
PKNOX1P55347 RNU6-1228P-201ENST00000391014 107 ntBASIC0.13□□□□□ -2.39
PKNOX1P55347 MIR548P-201ENST00000408336 84 ntBASIC0.13□□□□□ -2.39
PKNOX1P55347 RNU6-651P-201ENST00000411040 105 ntBASIC0.13□□□□□ -2.39
PKNOX1P55347 SNORD2.1-201ENST00000458762 69 ntBASIC0.13□□□□□ -2.39
PKNOX1P55347 RNU6-1137P-201ENST00000517073 99 ntBASIC0.13□□□□□ -2.39
PKNOX1P55347 MIR302B-201ENST00000362188 73 ntBASIC0.12□□□□□ -2.39
PKNOX1P55347 Y_RNA.118-201ENST00000363300 101 ntBASIC0.12□□□□□ -2.39
PKNOX1P55347 Y_RNA.351-201ENST00000365436 96 ntBASIC0.12□□□□□ -2.39
PKNOX1P55347 RNU6-815P-201ENST00000384080 113 ntBASIC0.12□□□□□ -2.39
PKNOX1P55347 MIR644A-201ENST00000385262 94 ntBASIC0.12□□□□□ -2.39
PKNOX1P55347 AL606845.1-201ENST00000404881 255 ntBASIC0.12□□□□□ -2.39
PKNOX1P55347 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.12□□□□□ -2.39
PKNOX1P55347 RNA5SP436-201ENST00000516020 115 ntBASIC0.12□□□□□ -2.39
PKNOX1P55347 AP003327.1-201ENST00000529684 127 ntBASIC0.12□□□□□ -2.39
PKNOX1P55347 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.12□□□□□ -2.39
PKNOX1P55347 MIR3171-201ENST00000584270 74 ntBASIC0.12□□□□□ -2.39
PKNOX1P55347 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.12□□□□□ -2.39
PKNOX1P55347 RNY1-201ENST00000364228 113 ntBASIC0.11□□□□□ -2.39
PKNOX1P55347 Y_RNA.430-201ENST00000384081 110 ntBASIC0.11□□□□□ -2.39
PKNOX1P55347 MIR616-201ENST00000385293 97 ntBASIC0.11□□□□□ -2.39
PKNOX1P55347 U8.15-201ENST00000390947 134 ntBASIC0.11□□□□□ -2.39
PKNOX1P55347 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
PKNOX1P55347 AC096949.1-201ENST00000412047 152 ntBASIC0.11□□□□□ -2.39
PKNOX1P55347 AC020661.2-201ENST00000560114 134 ntBASIC0.11□□□□□ -2.39
PKNOX1P55347 MIR3129-201ENST00000581095 76 ntBASIC0.11□□□□□ -2.39
PKNOX1P55347 MIR5197-201ENST00000583721 112 ntBASIC0.11□□□□□ -2.39
PKNOX1P55347 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.11□□□□□ -2.39
PKNOX1P55347 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.11□□□□□ -2.39
PKNOX1P55347 AC091932.4-201ENST00000623386 200 ntBASIC0.11□□□□□ -2.39
PKNOX1P55347 Y_RNA.13-201ENST00000362403 112 ntBASIC0.1□□□□□ -2.39
PKNOX1P55347 Y_RNA.44-201ENST00000362676 108 ntBASIC0.1□□□□□ -2.39
PKNOX1P55347 Y_RNA.535-201ENST00000384612 99 ntBASIC0.1□□□□□ -2.39
PKNOX1P55347 Y_RNA.588-201ENST00000391254 102 ntBASIC0.1□□□□□ -2.39
PKNOX1P55347 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
PKNOX1P55347 RNA5SP261-201ENST00000410536 106 ntBASIC0.1□□□□□ -2.39
PKNOX1P55347 AC073261.1-201ENST00000429409 121 ntBASIC0.1□□□□□ -2.39
PKNOX1P55347 SNORA62.5-201ENST00000516634 120 ntBASIC0.1□□□□□ -2.39
PKNOX1P55347 RNU6-570P-201ENST00000517051 105 ntBASIC0.1□□□□□ -2.39
PKNOX1P55347 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.1□□□□□ -2.39
PKNOX1P55347 AC069113.3-201ENST00000521019 150 ntBASIC0.1□□□□□ -2.39
PKNOX1P55347 Y_RNA.82-201ENST00000363000 102 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 Y_RNA.92-201ENST00000363043 102 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 Y_RNA.235-201ENST00000364412 102 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 Y_RNA.306-201ENST00000365015 102 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 Y_RNA.312-201ENST00000365089 102 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 Y_RNA.322-201ENST00000365151 102 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 Y_RNA.508-201ENST00000384502 114 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 Y_RNA.542-201ENST00000384641 111 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 RNA5SP237-201ENST00000410414 113 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 AC113618.1-201ENST00000416747 285 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 AL512326.2-201ENST00000426359 151 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 Y_RNA.650-201ENST00000459002 102 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 AL117351.2-201ENST00000513571 157 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 RNU6-561P-201ENST00000516222 102 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 Y_RNA.777-201ENST00000516982 102 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 Y_RNA.771-201ENST00000598668 102 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 MIR6082-201ENST00000613604 109 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 Y_RNA.789-201ENST00000622480 102 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 MIR4315-1-201ENST00000636800 73 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 MIR6841-201ENST00000637129 72 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 MIR4315-2-201ENST00000640925 73 ntBASIC0.09□□□□□ -2.4
PKNOX1P55347 Y_RNA.32-201ENST00000362589 110 ntBASIC0.08□□□□□ -2.4
PKNOX1P55347 Y_RNA.199-201ENST00000364014 102 ntBASIC0.08□□□□□ -2.4
PKNOX1P55347 RNY1P4-201ENST00000384595 115 ntBASIC0.08□□□□□ -2.4
PKNOX1P55347 RNU7-80P-201ENST00000459562 61 ntBASIC0.08□□□□□ -2.4
PKNOX1P55347 AC141846.1-201ENST00000568348 142 ntBASIC0.08□□□□□ -2.4
PKNOX1P55347 MIR4514-201ENST00000581410 57 ntBASIC0.08□□□□□ -2.4
PKNOX1P55347 MIR924-201ENST00000638017 53 ntBASIC0.08□□□□□ -2.4
PKNOX1P55347 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
PKNOX1P55347 RNU6-403P-201ENST00000363163 104 ntBASIC0.07□□□□□ -2.4
PKNOX1P55347 Y_RNA.237-201ENST00000364439 102 ntBASIC0.07□□□□□ -2.4
PKNOX1P55347 RNU6-381P-201ENST00000391259 108 ntBASIC0.07□□□□□ -2.4
PKNOX1P55347 RNU2-59P-201ENST00000410482 191 ntBASIC0.07□□□□□ -2.4
PKNOX1P55347 MTND4LP11-201ENST00000422184 280 ntBASIC0.07□□□□□ -2.4
PKNOX1P55347 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.07□□□□□ -2.4
PKNOX1P55347 RPL39P25-201ENST00000449384 154 ntBASIC0.07□□□□□ -2.4
PKNOX1P55347 RNU6-469P-201ENST00000516253 101 ntBASIC0.07□□□□□ -2.4
PKNOX1P55347 SNORA31.14-201ENST00000516728 116 ntBASIC0.07□□□□□ -2.4
PKNOX1P55347 RNA5SP268-201ENST00000516828 124 ntBASIC0.07□□□□□ -2.4
PKNOX1P55347 AC112693.2-201ENST00000556538 232 ntBASIC0.07□□□□□ -2.4
PKNOX1P55347 U2.14-201ENST00000615943 113 ntBASIC0.07□□□□□ -2.4
PKNOX1P55347 AC010487.4-201ENST00000637027 61 ntBASIC0.07□□□□□ -2.4
PKNOX1P55347 AL596211.1-201ENST00000569873 2277 ntBASIC0.07□□□□□ -2.4
PKNOX1P55347 Y_RNA.61-201ENST00000362835 102 ntBASIC0.06□□□□□ -2.4
PKNOX1P55347 Y_RNA.454-201ENST00000384224 113 ntBASIC0.06□□□□□ -2.4
PKNOX1P55347 Y_RNA.618-201ENST00000410949 107 ntBASIC0.06□□□□□ -2.4
PKNOX1P55347 RNU6-765P-201ENST00000516916 99 ntBASIC0.06□□□□□ -2.4
PKNOX1P55347 MIR4491-201ENST00000581087 68 ntBASIC0.06□□□□□ -2.4
PKNOX1P55347 RN7SL793P-201ENST00000583259 296 ntBASIC0.06□□□□□ -2.4
PKNOX1P55347 AL365205.2-201ENST00000594586 68 ntBASIC0.06□□□□□ -2.4
PKNOX1P55347 MIR7107-201ENST00000611489 80 ntBASIC0.06□□□□□ -2.4
PKNOX1P55347 AL442067.1-201ENST00000613261 223 ntBASIC0.06□□□□□ -2.4
PKNOX1P55347 MIR6755-201ENST00000619993 66 ntBASIC0.06□□□□□ -2.4
PKNOX1P55347 RNU6-1099P-201ENST00000363533 107 ntBASIC0.05□□□□□ -2.4
PKNOX1P55347 RNU6-1292P-201ENST00000383856 107 ntBASIC0.05□□□□□ -2.4
PKNOX1P55347 MIR193B-201ENST00000384907 83 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 205.7 ms