Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RNU6-747P-201ENST00000390928 104 ntBASIC0.38□□□□□ -2.35
LIM2P55344 RNU6-241P-201ENST00000391148 104 ntBASIC0.38□□□□□ -2.35
LIM2P55344 MIR548F4-201ENST00000408515 105 ntBASIC0.38□□□□□ -2.35
LIM2P55344 RNU6-447P-201ENST00000410293 104 ntBASIC0.38□□□□□ -2.35
LIM2P55344 RNU6-1118P-201ENST00000410382 104 ntBASIC0.38□□□□□ -2.35
LIM2P55344 RNU6-1076P-201ENST00000410397 104 ntBASIC0.38□□□□□ -2.35
LIM2P55344 RNU6-355P-201ENST00000410427 104 ntBASIC0.38□□□□□ -2.35
LIM2P55344 RNU6-791P-201ENST00000410467 104 ntBASIC0.38□□□□□ -2.35
LIM2P55344 RNU6-705P-201ENST00000410601 104 ntBASIC0.38□□□□□ -2.35
LIM2P55344 RNU6-1100P-201ENST00000410691 104 ntBASIC0.38□□□□□ -2.35
LIM2P55344 RNU6-860P-201ENST00000410860 104 ntBASIC0.38□□□□□ -2.35
LIM2P55344 Y_RNA.618-201ENST00000410949 107 ntBASIC0.38□□□□□ -2.35
LIM2P55344 RNU6-1217P-201ENST00000411276 104 ntBASIC0.38□□□□□ -2.35
LIM2P55344 RNU6-785P-201ENST00000411324 104 ntBASIC0.38□□□□□ -2.35
LIM2P55344 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.38□□□□□ -2.35
LIM2P55344 AC015818.7-201ENST00000428754 109 ntBASIC0.38□□□□□ -2.35
LIM2P55344 AC087499.7-201ENST00000441958 109 ntBASIC0.38□□□□□ -2.35
LIM2P55344 RNU7-185P-201ENST00000459215 60 ntBASIC0.38□□□□□ -2.35
LIM2P55344 MIR4711-201ENST00000578274 70 ntBASIC0.38□□□□□ -2.35
LIM2P55344 AC090897.1-201ENST00000580909 226 ntBASIC0.38□□□□□ -2.35
LIM2P55344 uc_338.6-201ENST00000613544 171 ntBASIC0.38□□□□□ -2.35
LIM2P55344 U6.90-201ENST00000614007 104 ntBASIC0.38□□□□□ -2.35
LIM2P55344 U6.70-201ENST00000620287 104 ntBASIC0.38□□□□□ -2.35
LIM2P55344 PVT1_3.1-201ENST00000620853 95 ntBASIC0.38□□□□□ -2.35
LIM2P55344 MIR6717-201ENST00000622747 73 ntBASIC0.38□□□□□ -2.35
LIM2P55344 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
LIM2P55344 MIR302B-201ENST00000362188 73 ntBASIC0.37□□□□□ -2.35
LIM2P55344 RNU6-1309P-201ENST00000363305 108 ntBASIC0.37□□□□□ -2.35
LIM2P55344 SNORD18A-201ENST00000363753 72 ntBASIC0.37□□□□□ -2.35
LIM2P55344 SNORA1-201ENST00000384107 130 ntBASIC0.37□□□□□ -2.35
LIM2P55344 Y_RNA.512-201ENST00000384518 102 ntBASIC0.37□□□□□ -2.35
LIM2P55344 MIR216A-201ENST00000385063 110 ntBASIC0.37□□□□□ -2.35
LIM2P55344 MT-TW-201ENST00000387382 68 ntBASIC0.37□□□□□ -2.35
LIM2P55344 SNORA26.6-201ENST00000391256 115 ntBASIC0.37□□□□□ -2.35
LIM2P55344 RNA5SP193-201ENST00000410353 107 ntBASIC0.37□□□□□ -2.35
LIM2P55344 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.37□□□□□ -2.35
LIM2P55344 MIR3152-201ENST00000579801 74 ntBASIC0.37□□□□□ -2.35
LIM2P55344 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
LIM2P55344 AC090625.1-201ENST00000357130 210 ntBASIC0.36□□□□□ -2.35
LIM2P55344 MIR30D-201ENST00000362283 70 ntBASIC0.36□□□□□ -2.35
LIM2P55344 Y_RNA.23-201ENST00000362496 106 ntBASIC0.36□□□□□ -2.35
LIM2P55344 Y_RNA.176-201ENST00000363815 109 ntBASIC0.36□□□□□ -2.35
LIM2P55344 Y_RNA.326-201ENST00000365176 113 ntBASIC0.36□□□□□ -2.35
LIM2P55344 Y_RNA.393-201ENST00000383936 102 ntBASIC0.36□□□□□ -2.35
LIM2P55344 Y_RNA.483-201ENST00000384380 101 ntBASIC0.36□□□□□ -2.35
LIM2P55344 RNU6-364P-201ENST00000384387 107 ntBASIC0.36□□□□□ -2.35
LIM2P55344 RNU6-1190P-201ENST00000410811 104 ntBASIC0.36□□□□□ -2.35
LIM2P55344 AL138752.1-201ENST00000452964 351 ntBASIC0.36□□□□□ -2.35
LIM2P55344 AP003072.1-201ENST00000531740 145 ntBASIC0.36□□□□□ -2.35
LIM2P55344 RN7SL793P-201ENST00000583259 296 ntBASIC0.36□□□□□ -2.35
LIM2P55344 Y_RNA.7-201ENST00000362352 102 ntBASIC0.35□□□□□ -2.35
LIM2P55344 RNU6-238P-201ENST00000363313 106 ntBASIC0.35□□□□□ -2.35
LIM2P55344 Y_RNA.145-201ENST00000363527 102 ntBASIC0.35□□□□□ -2.35
LIM2P55344 SNORD114-23-201ENST00000363536 72 ntBASIC0.35□□□□□ -2.35
LIM2P55344 Y_RNA.351-201ENST00000365436 96 ntBASIC0.35□□□□□ -2.35
LIM2P55344 RNY1P8-201ENST00000383970 114 ntBASIC0.35□□□□□ -2.35
LIM2P55344 Y_RNA.416-201ENST00000384014 113 ntBASIC0.35□□□□□ -2.35
LIM2P55344 RNU6-472P-201ENST00000384299 107 ntBASIC0.35□□□□□ -2.35
LIM2P55344 SNORD12C-201ENST00000386307 89 ntBASIC0.35□□□□□ -2.35
LIM2P55344 MIR548H3-201ENST00000408771 118 ntBASIC0.35□□□□□ -2.35
LIM2P55344 MTATP8P1-201ENST00000467115 207 ntBASIC0.35□□□□□ -2.35
LIM2P55344 AC243829.6-201ENST00000612652 106 ntBASIC0.35□□□□□ -2.35
LIM2P55344 AL442067.1-201ENST00000613261 223 ntBASIC0.35□□□□□ -2.35
LIM2P55344 Y_RNA.36-201ENST00000362602 112 ntBASIC0.34□□□□□ -2.36
LIM2P55344 Y_RNA.121-201ENST00000363309 113 ntBASIC0.34□□□□□ -2.36
LIM2P55344 SNORA63-201ENST00000363450 132 ntBASIC0.34□□□□□ -2.36
LIM2P55344 RNU7-102P-201ENST00000458948 62 ntBASIC0.34□□□□□ -2.36
LIM2P55344 AC002350.1-201ENST00000490759 375 ntBASIC0.34□□□□□ -2.36
LIM2P55344 AP003327.1-201ENST00000529684 127 ntBASIC0.34□□□□□ -2.36
LIM2P55344 AL117187.1-201ENST00000555482 181 ntBASIC0.34□□□□□ -2.36
LIM2P55344 AC011921.3-201ENST00000605540 361 ntBASIC0.34□□□□□ -2.36
LIM2P55344 Y_RNA.812-201ENST00000610788 101 ntBASIC0.34□□□□□ -2.36
LIM2P55344 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.34□□□□□ -2.36
LIM2P55344 Y_RNA.784-201ENST00000613803 101 ntBASIC0.34□□□□□ -2.36
LIM2P55344 Y_RNA.787-201ENST00000616522 101 ntBASIC0.34□□□□□ -2.36
LIM2P55344 Y_RNA.780-201ENST00000617336 101 ntBASIC0.34□□□□□ -2.36
LIM2P55344 Y_RNA.801-201ENST00000619005 101 ntBASIC0.34□□□□□ -2.36
LIM2P55344 uc_338.16-201ENST00000621804 95 ntBASIC0.34□□□□□ -2.36
LIM2P55344 MIR376A2-201ENST00000636782 80 ntBASIC0.34□□□□□ -2.36
LIM2P55344 AC010487.4-201ENST00000637027 61 ntBASIC0.34□□□□□ -2.36
LIM2P55344 Y_RNA.556-201ENST00000384677 113 ntBASIC0.33□□□□□ -2.36
LIM2P55344 RNU6-893P-201ENST00000458841 100 ntBASIC0.33□□□□□ -2.36
LIM2P55344 RNU6-561P-201ENST00000516222 102 ntBASIC0.33□□□□□ -2.36
LIM2P55344 SNORD116-25-201ENST00000516517 92 ntBASIC0.33□□□□□ -2.36
LIM2P55344 RNU7-156P-201ENST00000517214 74 ntBASIC0.33□□□□□ -2.36
LIM2P55344 MIR3129-201ENST00000581095 76 ntBASIC0.33□□□□□ -2.36
LIM2P55344 MIR4744-201ENST00000581563 82 ntBASIC0.33□□□□□ -2.36
LIM2P55344 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.33□□□□□ -2.36
LIM2P55344 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.33□□□□□ -2.36
LIM2P55344 AC092634.7-201ENST00000621022 103 ntBASIC0.33□□□□□ -2.36
LIM2P55344 AC091932.4-201ENST00000623386 200 ntBASIC0.33□□□□□ -2.36
LIM2P55344 MIR342-201ENST00000362212 99 ntBASIC0.32□□□□□ -2.36
LIM2P55344 SNORD114-26-201ENST00000363543 72 ntBASIC0.32□□□□□ -2.36
LIM2P55344 VTRNA1-3-201ENST00000365645 89 ntBASIC0.32□□□□□ -2.36
LIM2P55344 Y_RNA.540-201ENST00000384638 111 ntBASIC0.32□□□□□ -2.36
LIM2P55344 MIR606-201ENST00000384851 96 ntBASIC0.32□□□□□ -2.36
LIM2P55344 RNU6-448P-201ENST00000517052 107 ntBASIC0.32□□□□□ -2.36
LIM2P55344 MIR4643-201ENST00000577473 78 ntBASIC0.32□□□□□ -2.36
LIM2P55344 AC008608.1-201ENST00000603910 127 ntBASIC0.32□□□□□ -2.36
LIM2P55344 AL162730.1-201ENST00000605734 292 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 227.1 ms