Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MIR4423-201ENST00000580922 80 ntBASIC-1.07□□□□□ -2.58
NUP98P52948 AC005014.2-201ENST00000607795 599 ntBASIC-1.07□□□□□ -2.58
NUP98P52948 uc_338.19-201ENST00000616808 99 ntBASIC-1.07□□□□□ -2.58
NUP98P52948 MTND5P18-201ENST00000445624 1801 ntBASIC-1.07□□□□□ -2.58
NUP98P52948 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 RNU4-80P-201ENST00000363200 141 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 RNU6-455P-201ENST00000384681 107 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 MTATP6P26-201ENST00000445926 662 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 RNA5SP133-201ENST00000363368 119 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 SNORA75-201ENST00000384158 137 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 RNU6-901P-201ENST00000384593 106 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 AL160004.2-201ENST00000432935 350 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 RNU6-307P-201ENST00000516743 106 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 RNU7-188P-201ENST00000517063 64 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 MIR3179-1-201ENST00000578940 84 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 MIR3179-2-201ENST00000579107 84 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 MIR4662B-201ENST00000579498 81 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 MIR3179-3-201ENST00000579566 84 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 AC005357.1-201ENST00000588399 301 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 MIR3179-4-201ENST00000617599 84 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.08□□□□□ -2.58
NUP98P52948 RNY4P6-201ENST00000363667 96 ntBASIC-1.09□□□□□ -2.58
NUP98P52948 SNORD114-29-201ENST00000364819 70 ntBASIC-1.09□□□□□ -2.58
NUP98P52948 RNU6-449P-201ENST00000383914 107 ntBASIC-1.09□□□□□ -2.58
NUP98P52948 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.09□□□□□ -2.58
NUP98P52948 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.09□□□□□ -2.58
NUP98P52948 RNU6-1042P-201ENST00000384204 107 ntBASIC-1.09□□□□□ -2.58
NUP98P52948 MIR518B-201ENST00000385127 83 ntBASIC-1.09□□□□□ -2.58
NUP98P52948 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.09□□□□□ -2.58
NUP98P52948 HLA-S-202ENST00000425174 53 ntBASIC-1.09□□□□□ -2.58
NUP98P52948 AC144568.1-201ENST00000520139 137 ntBASIC-1.09□□□□□ -2.58
NUP98P52948 AC140658.3-201ENST00000567603 271 ntBASIC-1.09□□□□□ -2.58
NUP98P52948 AC138207.3-201ENST00000585289 166 ntBASIC-1.09□□□□□ -2.58
NUP98P52948 MIR6851-201ENST00000617060 67 ntBASIC-1.09□□□□□ -2.58
NUP98P52948 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.1□□□□□ -2.59
NUP98P52948 Y_RNA.77-201ENST00000362962 107 ntBASIC-1.1□□□□□ -2.59
NUP98P52948 MIR626-201ENST00000385032 94 ntBASIC-1.1□□□□□ -2.59
NUP98P52948 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.1□□□□□ -2.59
NUP98P52948 RNU7-104P-201ENST00000459398 79 ntBASIC-1.1□□□□□ -2.59
NUP98P52948 SNORD38.3-201ENST00000516599 73 ntBASIC-1.1□□□□□ -2.59
NUP98P52948 AC011373.1-201ENST00000607270 237 ntBASIC-1.1□□□□□ -2.59
NUP98P52948 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.1□□□□□ -2.59
NUP98P52948 SNORD56B-201ENST00000384713 71 ntBASIC-1.1□□□□□ -2.59
NUP98P52948 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.1□□□□□ -2.59
NUP98P52948 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.1□□□□□ -2.59
NUP98P52948 RNU2-14P-201ENST00000411053 191 ntBASIC-1.1□□□□□ -2.59
NUP98P52948 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.1□□□□□ -2.59
NUP98P52948 SCARNA18B-201ENST00000458806 135 ntBASIC-1.1□□□□□ -2.59
NUP98P52948 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.1□□□□□ -2.59
NUP98P52948 MIR548H5-201ENST00000580314 60 ntBASIC-1.1□□□□□ -2.59
NUP98P52948 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.1□□□□□ -2.59
NUP98P52948 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.11□□□□□ -2.59
NUP98P52948 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.11□□□□□ -2.59
NUP98P52948 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.11□□□□□ -2.59
NUP98P52948 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
NUP98P52948 AL590004.1-201ENST00000405321 300 ntBASIC-1.11□□□□□ -2.59
NUP98P52948 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.11□□□□□ -2.59
NUP98P52948 AL500527.2-201ENST00000454105 95 ntBASIC-1.11□□□□□ -2.59
NUP98P52948 RNU7-74P-201ENST00000459104 62 ntBASIC-1.11□□□□□ -2.59
NUP98P52948 RNU7-80P-201ENST00000459562 61 ntBASIC-1.11□□□□□ -2.59
NUP98P52948 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.11□□□□□ -2.59
NUP98P52948 RN7SKP295-201ENST00000517264 153 ntBASIC-1.11□□□□□ -2.59
NUP98P52948 AL049861.1-201ENST00000603130 150 ntBASIC-1.11□□□□□ -2.59
NUP98P52948 AL050303.3-201ENST00000613704 284 ntBASIC-1.11□□□□□ -2.59
NUP98P52948 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.11□□□□□ -2.59
NUP98P52948 AL359880.1-201ENST00000621879 266 ntBASIC-1.11□□□□□ -2.59
NUP98P52948 MIR1246-201ENST00000636535 73 ntBASIC-1.11□□□□□ -2.59
NUP98P52948 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.12□□□□□ -2.59
NUP98P52948 SNORA72.4-201ENST00000384174 132 ntBASIC-1.12□□□□□ -2.59
NUP98P52948 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.12□□□□□ -2.59
NUP98P52948 AC019235.1-201ENST00000503847 207 ntBASIC-1.12□□□□□ -2.59
NUP98P52948 RNU7-79P-201ENST00000516082 62 ntBASIC-1.12□□□□□ -2.59
NUP98P52948 RNA5SP33-201ENST00000516687 98 ntBASIC-1.12□□□□□ -2.59
NUP98P52948 AP003733.2-201ENST00000529409 171 ntBASIC-1.12□□□□□ -2.59
NUP98P52948 RNU6-86P-201ENST00000606534 107 ntBASIC-1.12□□□□□ -2.59
NUP98P52948 RN7SKP299-201ENST00000606679 301 ntBASIC-1.12□□□□□ -2.59
NUP98P52948 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.12□□□□□ -2.59
NUP98P52948 RNU6-259P-201ENST00000383999 107 ntBASIC-1.12□□□□□ -2.59
NUP98P52948 RNU6-429P-201ENST00000384582 108 ntBASIC-1.12□□□□□ -2.59
NUP98P52948 MIR9-2-201ENST00000384838 87 ntBASIC-1.12□□□□□ -2.59
NUP98P52948 SNORD64-201ENST00000386683 67 ntBASIC-1.12□□□□□ -2.59
NUP98P52948 RNU6-893P-201ENST00000458841 100 ntBASIC-1.12□□□□□ -2.59
NUP98P52948 MIR4659A-201ENST00000580269 81 ntBASIC-1.12□□□□□ -2.59
NUP98P52948 RNU7-10P-201ENST00000607194 63 ntBASIC-1.12□□□□□ -2.59
NUP98P52948 AC090617.10-201ENST00000624308 134 ntBASIC-1.12□□□□□ -2.59
NUP98P52948 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.12□□□□□ -2.59
NUP98P52948 AC024614.3-201ENST00000637860 256 ntBASIC-1.12□□□□□ -2.59
NUP98P52948 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.13□□□□□ -2.59
NUP98P52948 SNORD61-201ENST00000384252 73 ntBASIC-1.13□□□□□ -2.59
NUP98P52948 SNORA20-201ENST00000384662 132 ntBASIC-1.13□□□□□ -2.59
NUP98P52948 RNU2-66P-201ENST00000410650 161 ntBASIC-1.13□□□□□ -2.59
NUP98P52948 SNORD36C-201ENST00000516733 66 ntBASIC-1.13□□□□□ -2.59
NUP98P52948 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms