Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 SNORA25.3-201ENST00000363205 127 ntBASIC0.95□□□□□ -2.26
HCFC1P51610 SNORA2B-201ENST00000384583 137 ntBASIC0.95□□□□□ -2.26
HCFC1P51610 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
HCFC1P51610 AC090844.1-201ENST00000422019 156 ntBASIC0.95□□□□□ -2.26
HCFC1P51610 snoU13.2-201ENST00000459201 104 ntBASIC0.95□□□□□ -2.26
HCFC1P51610 AC113410.1-201ENST00000505029 247 ntBASIC0.95□□□□□ -2.26
HCFC1P51610 SNORA31.2-201ENST00000516019 134 ntBASIC0.95□□□□□ -2.26
HCFC1P51610 MIR4295-201ENST00000585286 85 ntBASIC0.95□□□□□ -2.26
HCFC1P51610 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
HCFC1P51610 RNU6-888P-201ENST00000363010 101 ntBASIC0.94□□□□□ -2.26
HCFC1P51610 RNU6-460P-201ENST00000391158 108 ntBASIC0.94□□□□□ -2.26
HCFC1P51610 RNU7-80P-201ENST00000459562 61 ntBASIC0.94□□□□□ -2.26
HCFC1P51610 RN7SKP179-201ENST00000516126 217 ntBASIC0.94□□□□□ -2.26
HCFC1P51610 RNU6-830P-201ENST00000516353 107 ntBASIC0.94□□□□□ -2.26
HCFC1P51610 RNU6-255P-201ENST00000516957 105 ntBASIC0.94□□□□□ -2.26
HCFC1P51610 RNU6-902P-201ENST00000517212 91 ntBASIC0.94□□□□□ -2.26
HCFC1P51610 MIR4714-201ENST00000580728 77 ntBASIC0.94□□□□□ -2.26
HCFC1P51610 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.94□□□□□ -2.26
HCFC1P51610 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
HCFC1P51610 Y_RNA.330-201ENST00000365230 109 ntBASIC0.94□□□□□ -2.26
HCFC1P51610 RNU6-1292P-201ENST00000383856 107 ntBASIC0.94□□□□□ -2.26
HCFC1P51610 MIR758-201ENST00000390227 88 ntBASIC0.94□□□□□ -2.26
HCFC1P51610 MIR1302-7-201ENST00000408841 72 ntBASIC0.94□□□□□ -2.26
HCFC1P51610 AC006461.1-201ENST00000412637 326 ntBASIC0.94□□□□□ -2.26
HCFC1P51610 MIR3152-201ENST00000579801 74 ntBASIC0.94□□□□□ -2.26
HCFC1P51610 MIR6740-201ENST00000618268 113 ntBASIC0.94□□□□□ -2.26
HCFC1P51610 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
HCFC1P51610 Y_RNA.36-201ENST00000362602 112 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 RNU6-309P-201ENST00000364573 106 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 RNU4-11P-201ENST00000365287 132 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 Y_RNA.337-201ENST00000365312 102 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 SNORA2.2-201ENST00000365473 135 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 SNORA20-201ENST00000384662 132 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 MIR518F-201ENST00000384973 87 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 RNU6-613P-201ENST00000410412 108 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 RNU6-394P-201ENST00000410735 107 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 RPS26P48-201ENST00000491713 339 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 RNU2-13P-201ENST00000515909 113 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 Y_RNA.703-201ENST00000516846 111 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 MIR3664-201ENST00000579074 99 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 U7.2-201ENST00000607576 63 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 AC027335.2-201ENST00000624030 375 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 Y_RNA.251-201ENST00000364551 99 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 SNORD24-201ENST00000383884 75 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 SNORD41-201ENST00000386967 70 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 snoU13.21-201ENST00000459368 105 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 RNU6-958P-201ENST00000516995 106 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 MIR3121-201ENST00000579680 77 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.93□□□□□ -2.26
HCFC1P51610 AL596211.1-201ENST00000569873 2277 ntBASIC0.92□□□□□ -2.26
HCFC1P51610 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
HCFC1P51610 RNU6-690P-201ENST00000365242 106 ntBASIC0.92□□□□□ -2.26
HCFC1P51610 RNY1P6-201ENST00000384193 109 ntBASIC0.92□□□□□ -2.26
HCFC1P51610 RNU6-1065P-201ENST00000384513 106 ntBASIC0.92□□□□□ -2.26
HCFC1P51610 MIR520E-201ENST00000384867 87 ntBASIC0.92□□□□□ -2.26
HCFC1P51610 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.92□□□□□ -2.26
HCFC1P51610 CYP3A137P-201ENST00000562436 69 ntBASIC0.92□□□□□ -2.26
HCFC1P51610 MIR3192-201ENST00000584920 77 ntBASIC0.92□□□□□ -2.26
HCFC1P51610 AP000753.3-201ENST00000604083 169 ntBASIC0.92□□□□□ -2.26
HCFC1P51610 Y_RNA.420-201ENST00000384043 110 ntBASIC0.91□□□□□ -2.26
HCFC1P51610 SNORA25-201ENST00000384384 134 ntBASIC0.91□□□□□ -2.26
HCFC1P51610 MT-TN-201ENST00000387400 73 ntBASIC0.91□□□□□ -2.26
HCFC1P51610 Y_RNA.580-201ENST00000391004 95 ntBASIC0.91□□□□□ -2.26
HCFC1P51610 AL603914.1-201ENST00000401964 204 ntBASIC0.91□□□□□ -2.26
HCFC1P51610 RNU7-197P-201ENST00000458836 62 ntBASIC0.91□□□□□ -2.26
HCFC1P51610 RN7SKP19-201ENST00000516016 252 ntBASIC0.91□□□□□ -2.26
HCFC1P51610 MIR8055-201ENST00000610739 97 ntBASIC0.91□□□□□ -2.26
HCFC1P51610 MIR377-201ENST00000362145 69 ntBASIC0.9□□□□□ -2.27
HCFC1P51610 Y_RNA.205-201ENST00000364128 113 ntBASIC0.9□□□□□ -2.27
HCFC1P51610 SNORD50.2-201ENST00000365465 70 ntBASIC0.9□□□□□ -2.27
HCFC1P51610 RNU6-804P-201ENST00000384286 107 ntBASIC0.9□□□□□ -2.27
HCFC1P51610 SNORD77.3-201ENST00000391113 65 ntBASIC0.9□□□□□ -2.27
HCFC1P51610 SNORA75.2-201ENST00000391138 150 ntBASIC0.9□□□□□ -2.27
HCFC1P51610 SNORA75.3-201ENST00000391231 150 ntBASIC0.9□□□□□ -2.27
HCFC1P51610 AF228730.3-201ENST00000436691 102 ntBASIC0.9□□□□□ -2.27
HCFC1P51610 RPL39P25-201ENST00000449384 154 ntBASIC0.9□□□□□ -2.27
HCFC1P51610 AL662814.1-201ENST00000617364 121 ntBASIC0.9□□□□□ -2.27
HCFC1P51610 RNA5SP325-201ENST00000363756 130 ntBASIC0.89□□□□□ -2.27
HCFC1P51610 SNORA25.7-201ENST00000364375 127 ntBASIC0.89□□□□□ -2.27
HCFC1P51610 RNU4-16P-201ENST00000364737 141 ntBASIC0.89□□□□□ -2.27
HCFC1P51610 Y_RNA.488-201ENST00000384403 102 ntBASIC0.89□□□□□ -2.27
HCFC1P51610 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
HCFC1P51610 RNU6-1319P-201ENST00000390855 104 ntBASIC0.89□□□□□ -2.27
HCFC1P51610 RNU6-747P-201ENST00000390928 104 ntBASIC0.89□□□□□ -2.27
HCFC1P51610 RNU6-241P-201ENST00000391148 104 ntBASIC0.89□□□□□ -2.27
HCFC1P51610 RNU6-177P-201ENST00000411257 104 ntBASIC0.89□□□□□ -2.27
HCFC1P51610 Y_RNA.692-201ENST00000516627 105 ntBASIC0.89□□□□□ -2.27
HCFC1P51610 SNORD114-21-201ENST00000606412 72 ntBASIC0.89□□□□□ -2.27
HCFC1P51610 RNU6-746P-201ENST00000384112 109 ntBASIC0.89□□□□□ -2.27
HCFC1P51610 Y_RNA.454-201ENST00000384224 113 ntBASIC0.89□□□□□ -2.27
HCFC1P51610 MIR19B1-201ENST00000384829 87 ntBASIC0.89□□□□□ -2.27
HCFC1P51610 SNORD36C-201ENST00000516733 66 ntBASIC0.89□□□□□ -2.27
HCFC1P51610 AP001485.1-201ENST00000604799 199 ntBASIC0.89□□□□□ -2.27
HCFC1P51610 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
HCFC1P51610 RNY1P5-201ENST00000383890 115 ntBASIC0.88□□□□□ -2.27
HCFC1P51610 RNU6-205P-201ENST00000390858 107 ntBASIC0.88□□□□□ -2.27
HCFC1P51610 RNA5SP261-201ENST00000410536 106 ntBASIC0.88□□□□□ -2.27
HCFC1P51610 SNORD123-201ENST00000459473 70 ntBASIC0.88□□□□□ -2.27
HCFC1P51610 Y_RNA.686-201ENST00000516548 134 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 193.2 ms