Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 RNU4-69P-201ENST00000410677 143 ntBASIC1.83□□□□□ -2.12
CLK3P49761 RNU6-733P-201ENST00000410759 104 ntBASIC1.83□□□□□ -2.12
CLK3P49761 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.83□□□□□ -2.12
CLK3P49761 MIR3122-201ENST00000577243 73 ntBASIC1.83□□□□□ -2.12
CLK3P49761 MIR5089-201ENST00000580047 84 ntBASIC1.83□□□□□ -2.12
CLK3P49761 AC062037.1-201ENST00000605302 128 ntBASIC1.83□□□□□ -2.12
CLK3P49761 Y_RNA.773-201ENST00000607168 90 ntBASIC1.83□□□□□ -2.12
CLK3P49761 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CLK3P49761 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CLK3P49761 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.82□□□□□ -2.12
CLK3P49761 Y_RNA.155-201ENST00000363632 101 ntBASIC1.82□□□□□ -2.12
CLK3P49761 RNU4-67P-201ENST00000364569 141 ntBASIC1.82□□□□□ -2.12
CLK3P49761 Y_RNA.360-201ENST00000365512 102 ntBASIC1.82□□□□□ -2.12
CLK3P49761 RNU6-820P-201ENST00000384273 107 ntBASIC1.82□□□□□ -2.12
CLK3P49761 RNA5SP261-201ENST00000410536 106 ntBASIC1.82□□□□□ -2.12
CLK3P49761 RNU7-113P-201ENST00000459273 62 ntBASIC1.82□□□□□ -2.12
CLK3P49761 RNU2-13P-201ENST00000515909 113 ntBASIC1.82□□□□□ -2.12
CLK3P49761 RNU7-53P-201ENST00000516705 60 ntBASIC1.82□□□□□ -2.12
CLK3P49761 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.82□□□□□ -2.12
CLK3P49761 MIR1255B1-201ENST00000636325 63 ntBASIC1.82□□□□□ -2.12
CLK3P49761 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.81□□□□□ -2.12
CLK3P49761 Y_RNA.171-201ENST00000363760 102 ntBASIC1.81□□□□□ -2.12
CLK3P49761 SNORA24-201ENST00000384096 131 ntBASIC1.81□□□□□ -2.12
CLK3P49761 MIR450A2-201ENST00000385022 100 ntBASIC1.81□□□□□ -2.12
CLK3P49761 MIR516B2-201ENST00000385190 85 ntBASIC1.81□□□□□ -2.12
CLK3P49761 RNU6-360P-201ENST00000390944 104 ntBASIC1.81□□□□□ -2.12
CLK3P49761 AC096949.1-201ENST00000412047 152 ntBASIC1.81□□□□□ -2.12
CLK3P49761 RPL31P63-201ENST00000422565 375 ntBASIC1.81□□□□□ -2.12
CLK3P49761 RPS29P29-201ENST00000456396 171 ntBASIC1.81□□□□□ -2.12
CLK3P49761 RNU7-67P-201ENST00000459003 62 ntBASIC1.81□□□□□ -2.12
CLK3P49761 RNU7-45P-201ENST00000459460 63 ntBASIC1.81□□□□□ -2.12
CLK3P49761 AC026421.1-201ENST00000519101 163 ntBASIC1.81□□□□□ -2.12
CLK3P49761 DNAJC19P9-201ENST00000555084 351 ntBASIC1.81□□□□□ -2.12
CLK3P49761 SNRPGP19-201ENST00000603826 189 ntBASIC1.81□□□□□ -2.12
CLK3P49761 MIR6841-201ENST00000637129 72 ntBASIC1.81□□□□□ -2.12
CLK3P49761 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
CLK3P49761 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CLK3P49761 SNORA22.1-201ENST00000362701 134 ntBASIC1.8□□□□□ -2.12
CLK3P49761 RNU6-832P-201ENST00000363319 107 ntBASIC1.8□□□□□ -2.12
CLK3P49761 Y_RNA.430-201ENST00000384081 110 ntBASIC1.8□□□□□ -2.12
CLK3P49761 MIR577-201ENST00000385196 96 ntBASIC1.8□□□□□ -2.12
CLK3P49761 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CLK3P49761 SNORD77B-201ENST00000391112 67 ntBASIC1.8□□□□□ -2.12
CLK3P49761 SNORA26.6-201ENST00000391256 115 ntBASIC1.8□□□□□ -2.12
CLK3P49761 PGBD4P5-201ENST00000445958 426 ntBASIC1.8□□□□□ -2.12
CLK3P49761 snoU13.27-201ENST00000459278 104 ntBASIC1.8□□□□□ -2.12
CLK3P49761 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.8□□□□□ -2.12
CLK3P49761 RN7SKP12-201ENST00000516275 143 ntBASIC1.8□□□□□ -2.12
CLK3P49761 RNU6-1258P-201ENST00000516911 111 ntBASIC1.8□□□□□ -2.12
CLK3P49761 RNU6-958P-201ENST00000516995 106 ntBASIC1.8□□□□□ -2.12
CLK3P49761 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.8□□□□□ -2.12
CLK3P49761 AL513534.2-201ENST00000603836 250 ntBASIC1.8□□□□□ -2.12
CLK3P49761 AL513423.1-201ENST00000621695 132 ntBASIC1.8□□□□□ -2.12
CLK3P49761 AL445685.2-201ENST00000422551 342 ntBASIC1.79□□□□□ -2.12
CLK3P49761 RNU7-73P-201ENST00000458743 63 ntBASIC1.79□□□□□ -2.12
CLK3P49761 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.79□□□□□ -2.12
CLK3P49761 MIR4709-201ENST00000577272 72 ntBASIC1.79□□□□□ -2.12
CLK3P49761 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CLK3P49761 RNA5SP173-201ENST00000364857 136 ntBASIC1.78□□□□□ -2.12
CLK3P49761 Y_RNA.470-201ENST00000384307 117 ntBASIC1.78□□□□□ -2.12
CLK3P49761 MIR605-201ENST00000385078 83 ntBASIC1.78□□□□□ -2.12
CLK3P49761 MIR660-201ENST00000385235 97 ntBASIC1.78□□□□□ -2.12
CLK3P49761 AC004941.2-201ENST00000427009 228 ntBASIC1.78□□□□□ -2.12
CLK3P49761 AC093850.1-201ENST00000454121 251 ntBASIC1.78□□□□□ -2.12
CLK3P49761 RNU6-1018P-201ENST00000516577 106 ntBASIC1.78□□□□□ -2.12
CLK3P49761 RNA5SP33-201ENST00000516687 98 ntBASIC1.78□□□□□ -2.12
CLK3P49761 AP003327.1-201ENST00000529684 127 ntBASIC1.78□□□□□ -2.12
CLK3P49761 MIR548AE2-201ENST00000583456 67 ntBASIC1.78□□□□□ -2.12
CLK3P49761 AC021506.2-201ENST00000612354 169 ntBASIC1.78□□□□□ -2.12
CLK3P49761 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.78□□□□□ -2.12
CLK3P49761 MIR6717-201ENST00000622747 73 ntBASIC1.78□□□□□ -2.12
CLK3P49761 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.78□□□□□ -2.12
CLK3P49761 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
CLK3P49761 RNU6-170P-201ENST00000362832 104 ntBASIC1.77□□□□□ -2.13
CLK3P49761 Y_RNA.290-201ENST00000364879 114 ntBASIC1.77□□□□□ -2.13
CLK3P49761 RNU6-1134P-201ENST00000365156 101 ntBASIC1.77□□□□□ -2.13
CLK3P49761 Y_RNA.377-201ENST00000365644 108 ntBASIC1.77□□□□□ -2.13
CLK3P49761 RNU6-1152P-201ENST00000384576 107 ntBASIC1.77□□□□□ -2.13
CLK3P49761 RNU6-679P-201ENST00000391003 106 ntBASIC1.77□□□□□ -2.13
CLK3P49761 AL353813.1-201ENST00000440700 253 ntBASIC1.77□□□□□ -2.13
CLK3P49761 RNU7-34P-201ENST00000459394 64 ntBASIC1.77□□□□□ -2.13
CLK3P49761 SNORD123-201ENST00000459473 70 ntBASIC1.77□□□□□ -2.13
CLK3P49761 RNA5SP182-201ENST00000516064 82 ntBASIC1.77□□□□□ -2.13
CLK3P49761 MIR548AR-201ENST00000582191 57 ntBASIC1.77□□□□□ -2.13
CLK3P49761 AL020996.3-201ENST00000606617 222 ntBASIC1.77□□□□□ -2.13
CLK3P49761 AC012531.4-201ENST00000616509 177 ntBASIC1.77□□□□□ -2.13
CLK3P49761 AC243994.1-201ENST00000618627 109 ntBASIC1.77□□□□□ -2.13
CLK3P49761 SNORD114-1-201ENST00000362705 72 ntBASIC1.76□□□□□ -2.13
CLK3P49761 Y_RNA.96-201ENST00000363092 109 ntBASIC1.76□□□□□ -2.13
CLK3P49761 RNU6-439P-201ENST00000384188 106 ntBASIC1.76□□□□□ -2.13
CLK3P49761 RNU6-616P-201ENST00000384353 107 ntBASIC1.76□□□□□ -2.13
CLK3P49761 SNORA18-201ENST00000384416 132 ntBASIC1.76□□□□□ -2.13
CLK3P49761 Y_RNA.537-201ENST00000384626 109 ntBASIC1.76□□□□□ -2.13
CLK3P49761 RNU6-1067P-201ENST00000384752 107 ntBASIC1.76□□□□□ -2.13
CLK3P49761 MIR526A1-201ENST00000384897 85 ntBASIC1.76□□□□□ -2.13
CLK3P49761 SNORD28B-201ENST00000390993 75 ntBASIC1.76□□□□□ -2.13
CLK3P49761 SNORA7.5-201ENST00000410672 110 ntBASIC1.76□□□□□ -2.13
CLK3P49761 AC099513.1-201ENST00000490423 301 ntBASIC1.76□□□□□ -2.13
CLK3P49761 RNU7-61P-201ENST00000515897 61 ntBASIC1.76□□□□□ -2.13
CLK3P49761 MIR3945-201ENST00000581853 98 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 194.5 ms