Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 Y_RNA.454-201ENST00000384224 113 ntBASIC0.07□□□□□ -2.4
CASP4P49662 RNU6-1289P-201ENST00000384431 106 ntBASIC0.07□□□□□ -2.4
CASP4P49662 Y_RNA.509-201ENST00000384506 99 ntBASIC0.07□□□□□ -2.4
CASP4P49662 MIR1295A-201ENST00000408463 79 ntBASIC0.07□□□□□ -2.4
CASP4P49662 RNU2-59P-201ENST00000410482 191 ntBASIC0.07□□□□□ -2.4
CASP4P49662 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.07□□□□□ -2.4
CASP4P49662 RNU7-80P-201ENST00000459562 61 ntBASIC0.07□□□□□ -2.4
CASP4P49662 AC113195.1-201ENST00000579952 141 ntBASIC0.07□□□□□ -2.4
CASP4P49662 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.06□□□□□ -2.4
CASP4P49662 Y_RNA.84-201ENST00000363011 104 ntBASIC0.06□□□□□ -2.4
CASP4P49662 Y_RNA.128-201ENST00000363391 112 ntBASIC0.06□□□□□ -2.4
CASP4P49662 SNORA36.1-201ENST00000363424 132 ntBASIC0.06□□□□□ -2.4
CASP4P49662 RNU6-806P-201ENST00000365147 105 ntBASIC0.06□□□□□ -2.4
CASP4P49662 RNU6-815P-201ENST00000384080 113 ntBASIC0.06□□□□□ -2.4
CASP4P49662 Y_RNA.542-201ENST00000384641 111 ntBASIC0.06□□□□□ -2.4
CASP4P49662 RNU6-135P-201ENST00000516769 101 ntBASIC0.06□□□□□ -2.4
CASP4P49662 SNORA42.1-201ENST00000363515 137 ntBASIC0.05□□□□□ -2.4
CASP4P49662 Y_RNA.174-201ENST00000363781 105 ntBASIC0.05□□□□□ -2.4
CASP4P49662 Y_RNA.540-201ENST00000384638 111 ntBASIC0.05□□□□□ -2.4
CASP4P49662 MIR616-201ENST00000385293 97 ntBASIC0.05□□□□□ -2.4
CASP4P49662 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.05□□□□□ -2.4
CASP4P49662 Y_RNA.622-201ENST00000411091 108 ntBASIC0.05□□□□□ -2.4
CASP4P49662 AC113618.1-201ENST00000416747 285 ntBASIC0.05□□□□□ -2.4
CASP4P49662 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.05□□□□□ -2.4
CASP4P49662 SNRPGP8-201ENST00000454064 226 ntBASIC0.05□□□□□ -2.4
CASP4P49662 RNU7-45P-201ENST00000459460 63 ntBASIC0.05□□□□□ -2.4
CASP4P49662 RNU6-1338P-201ENST00000516328 91 ntBASIC0.05□□□□□ -2.4
CASP4P49662 RNU6-765P-201ENST00000516916 99 ntBASIC0.05□□□□□ -2.4
CASP4P49662 MIR3152-201ENST00000579801 74 ntBASIC0.05□□□□□ -2.4
CASP4P49662 MIR5197-201ENST00000583721 112 ntBASIC0.05□□□□□ -2.4
CASP4P49662 AC023932.2-201ENST00000603176 175 ntBASIC0.05□□□□□ -2.4
CASP4P49662 Y_RNA.26-201ENST00000362539 101 ntBASIC0.04□□□□□ -2.4
CASP4P49662 Y_RNA.64-201ENST00000362845 102 ntBASIC0.04□□□□□ -2.4
CASP4P49662 SNORA22B-201ENST00000383876 138 ntBASIC0.04□□□□□ -2.4
CASP4P49662 SNORA1-201ENST00000384107 130 ntBASIC0.04□□□□□ -2.4
CASP4P49662 Y_RNA.460-201ENST00000384255 102 ntBASIC0.04□□□□□ -2.4
CASP4P49662 MIR193B-201ENST00000384907 83 ntBASIC0.04□□□□□ -2.4
CASP4P49662 RNU6-1228P-201ENST00000391014 107 ntBASIC0.04□□□□□ -2.4
CASP4P49662 Y_RNA.617-201ENST00000410920 90 ntBASIC0.04□□□□□ -2.4
CASP4P49662 AL358176.2-201ENST00000425769 204 ntBASIC0.04□□□□□ -2.4
CASP4P49662 RNA5SP268-201ENST00000516828 124 ntBASIC0.04□□□□□ -2.4
CASP4P49662 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.04□□□□□ -2.4
CASP4P49662 MIR6082-201ENST00000613604 109 ntBASIC0.04□□□□□ -2.4
CASP4P49662 AC091932.4-201ENST00000623386 200 ntBASIC0.04□□□□□ -2.4
CASP4P49662 AC134503.1-201ENST00000633048 54 ntBASIC0.04□□□□□ -2.4
CASP4P49662 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
CASP4P49662 Y_RNA.13-201ENST00000362403 112 ntBASIC0.03□□□□□ -2.4
CASP4P49662 Y_RNA.23-201ENST00000362496 106 ntBASIC0.03□□□□□ -2.4
CASP4P49662 RNU5E-4P-201ENST00000364931 120 ntBASIC0.03□□□□□ -2.4
CASP4P49662 Y_RNA.527-201ENST00000384573 102 ntBASIC0.03□□□□□ -2.4
CASP4P49662 SNORA20-201ENST00000384662 132 ntBASIC0.03□□□□□ -2.4
CASP4P49662 MIR644A-201ENST00000385262 94 ntBASIC0.03□□□□□ -2.4
CASP4P49662 MT-TT-201ENST00000387460 66 ntBASIC0.03□□□□□ -2.4
CASP4P49662 AL606845.1-201ENST00000404881 255 ntBASIC0.03□□□□□ -2.4
CASP4P49662 RNU6-1203P-201ENST00000410703 110 ntBASIC0.03□□□□□ -2.4
CASP4P49662 SCARNA24.2-201ENST00000516968 130 ntBASIC0.03□□□□□ -2.4
CASP4P49662 Y_RNA.711-201ENST00000516993 102 ntBASIC0.03□□□□□ -2.4
CASP4P49662 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
CASP4P49662 MIR376A2-201ENST00000636782 80 ntBASIC0.03□□□□□ -2.4
CASP4P49662 MTND4P29-201ENST00000503122 1372 ntBASIC0.03□□□□□ -2.4
CASP4P49662 Y_RNA.44-201ENST00000362676 108 ntBASIC0.02□□□□□ -2.41
CASP4P49662 Y_RNA.199-201ENST00000364014 102 ntBASIC0.02□□□□□ -2.41
CASP4P49662 RNU6-1292P-201ENST00000383856 107 ntBASIC0.02□□□□□ -2.41
CASP4P49662 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
CASP4P49662 U8.15-201ENST00000390947 134 ntBASIC0.02□□□□□ -2.41
CASP4P49662 SNORD2.1-201ENST00000458762 69 ntBASIC0.02□□□□□ -2.41
CASP4P49662 AC141846.1-201ENST00000568348 142 ntBASIC0.02□□□□□ -2.41
CASP4P49662 MIR3129-201ENST00000581095 76 ntBASIC0.02□□□□□ -2.41
CASP4P49662 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.02□□□□□ -2.41
CASP4P49662 Y_RNA.32-201ENST00000362589 110 ntBASIC0.01□□□□□ -2.41
CASP4P49662 RNU6-403P-201ENST00000363163 104 ntBASIC0.01□□□□□ -2.41
CASP4P49662 Y_RNA.117-201ENST00000363294 101 ntBASIC0.01□□□□□ -2.41
CASP4P49662 RNU6-1229P-201ENST00000364295 107 ntBASIC0.01□□□□□ -2.41
CASP4P49662 Y_RNA.588-201ENST00000391254 102 ntBASIC0.01□□□□□ -2.41
CASP4P49662 MIR548P-201ENST00000408336 84 ntBASIC0.01□□□□□ -2.41
CASP4P49662 SNORA79-201ENST00000408376 140 ntBASIC0.01□□□□□ -2.41
CASP4P49662 Y_RNA.618-201ENST00000410949 107 ntBASIC0.01□□□□□ -2.41
CASP4P49662 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.01□□□□□ -2.41
CASP4P49662 MTND5P22-201ENST00000458380 195 ntBASIC0.01□□□□□ -2.41
CASP4P49662 SNORA62.5-201ENST00000516634 120 ntBASIC0.01□□□□□ -2.41
CASP4P49662 MIR4680-201ENST00000580906 66 ntBASIC0.01□□□□□ -2.41
CASP4P49662 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.01□□□□□ -2.41
CASP4P49662 MIR6828-201ENST00000636181 60 ntBASIC0.01□□□□□ -2.41
CASP4P49662 MIR6841-201ENST00000637129 72 ntBASIC0.01□□□□□ -2.41
CASP4P49662 AL596211.1-201ENST00000569873 2277 ntBASIC0.01□□□□□ -2.41
CASP4P49662 SNORA9.1-201ENST00000362412 131 ntBASIC0□□□□□ -2.41
CASP4P49662 Y_RNA.82-201ENST00000363000 102 ntBASIC0□□□□□ -2.41
CASP4P49662 Y_RNA.92-201ENST00000363043 102 ntBASIC0□□□□□ -2.41
CASP4P49662 snoU2_19.4-201ENST00000364329 80 ntBASIC0□□□□□ -2.41
CASP4P49662 Y_RNA.235-201ENST00000364412 102 ntBASIC0□□□□□ -2.41
CASP4P49662 Y_RNA.306-201ENST00000365015 102 ntBASIC0□□□□□ -2.41
CASP4P49662 Y_RNA.312-201ENST00000365089 102 ntBASIC0□□□□□ -2.41
CASP4P49662 Y_RNA.322-201ENST00000365151 102 ntBASIC0□□□□□ -2.41
CASP4P49662 RNU6-597P-201ENST00000365620 102 ntBASIC0□□□□□ -2.41
CASP4P49662 Y_RNA.476-201ENST00000384347 108 ntBASIC0□□□□□ -2.41
CASP4P49662 MIR613-201ENST00000385248 95 ntBASIC0□□□□□ -2.41
CASP4P49662 SEPT7P4-201ENST00000437076 306 ntBASIC0□□□□□ -2.41
CASP4P49662 Y_RNA.650-201ENST00000459002 102 ntBASIC0□□□□□ -2.41
CASP4P49662 Y_RNA.777-201ENST00000516982 102 ntBASIC0□□□□□ -2.41
CASP4P49662 SCARNA16.5-201ENST00000517114 183 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms